RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 RPL13AP40429 203 aaKnown RBP11.69□□□□□ -0.54
TUBB3-209ENST00000555609 CSDC2Q9Y534 153 aaKnown RBP11.69□□□□□ -0.54
TUBB3-209ENST00000555609 VPS13CQ709C8 3753 aa11.69□□□□□ -0.54
TUBB3-209ENST00000555609 HERVK_113P63121 156 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 CIRBPQ14011 172 aaKnown RBP11.68□□□□□ -0.54
TUBB3-209ENST00000555609 DGAT2L7PQ6IED9 249 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 IL17DQ8TAD2 202 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 MAP1AP78559 2803 aaPredicted RBP11.68□□□□□ -0.54
TUBB3-209ENST00000555609 H7C2G1 150 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 ANKRD17O75179 2603 aaKnown RBP11.68□□□□□ -0.54
TUBB3-209ENST00000555609 CMC4P56277 68 aaPredicted RBP11.68□□□□□ -0.54
TUBB3-209ENST00000555609 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 TEX15Q9BXT5 2789 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 ICOSQ9Y6W8 199 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 NAV2Q8IVL1 2488 aa11.67□□□□□ -0.54
TUBB3-209ENST00000555609 CCDC168Q8NDH2 2452 aa11.67□□□□□ -0.54
TUBB3-209ENST00000555609 ZFHX3Q15911 3703 aa11.67□□□□□ -0.54
TUBB3-209ENST00000555609 TRIAP1O43715 76 aa11.67□□□□□ -0.54
TUBB3-209ENST00000555609 CSPG4Q6UVK1 2322 aa11.67□□□□□ -0.54
TUBB3-209ENST00000555609 ADARB2-AS1A8MUL3 147 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 FHL3Q13643 280 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 IGLV5-39A0A0G2JS06 123 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 H3BT86 120 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 DAZ2Q13117 558 aaKnown RBP11.66□□□□□ -0.54
TUBB3-209ENST00000555609 RNASE13Q5GAN3 156 aaKnown RBP11.66□□□□□ -0.54
TUBB3-209ENST00000555609 DAZ4Q86SG3 579 aaKnown RBP11.66□□□□□ -0.54
TUBB3-209ENST00000555609 STHQ8IWL8 128 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 PPDPFQ9H3Y8 114 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 DAZ3Q9NR90 486 aaKnown RBP11.66□□□□□ -0.54
TUBB3-209ENST00000555609 Q9UF83 564 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 PRRC2AP48634 2157 aaKnown RBP11.65□□□□□ -0.54
TUBB3-209ENST00000555609 PDZD2O15018 2839 aa11.65□□□□□ -0.54
TUBB3-209ENST00000555609 PRM2P04554 102 aa11.65□□□□□ -0.54
TUBB3-209ENST00000555609 XGP55808 180 aa11.65□□□□□ -0.54
TUBB3-209ENST00000555609 KHDC1LQ5JSQ8 128 aa11.65□□□□□ -0.54
TUBB3-209ENST00000555609 TMEM101Q96IK0 257 aa11.65□□□□□ -0.54
TUBB3-209ENST00000555609 MAST4O15021 2626 aa11.65□□□□□ -0.55
TUBB3-209ENST00000555609 MT-ATP8P03928 68 aa11.64□□□□□ -0.55
TUBB3-209ENST00000555609 RPL36AP83881 106 aaKnown RBP11.64□□□□□ -0.55
TUBB3-209ENST00000555609 RPL36ALQ969Q0 106 aaKnown RBP11.64□□□□□ -0.55
TUBB3-209ENST00000555609 CDKN2A-AS1Q9UH64 79 aa11.64□□□□□ -0.55
TUBB3-209ENST00000555609 ODF3L2Q3SX64 289 aa11.63□□□□□ -0.55
TUBB3-209ENST00000555609 NACAE9PAV3 2078 aa11.63□□□□□ -0.55
TUBB3-209ENST00000555609 AKAP9Q99996 3911 aa11.63□□□□□ -0.55
TUBB3-209ENST00000555609 TRAV4A0A0B4J268 109 aa11.63□□□□□ -0.55
TUBB3-209ENST00000555609 IGHV3-38A0A0C4DH36 116 aa11.63□□□□□ -0.55
TUBB3-209ENST00000555609 C1orf158Q8N1D5 194 aa11.63□□□□□ -0.55
TUBB3-209ENST00000555609 IGHV3OR16-12A0A075B7B8 117 aa11.61□□□□□ -0.55
TUBB3-209ENST00000555609 K7EQD1 137 aa11.61□□□□□ -0.55
TUBB3-209ENST00000555609 NTN5Q8WTR8 489 aaPredicted RBP11.61□□□□□ -0.55
TUBB3-209ENST00000555609 XCL2Q9UBD3 114 aa11.61□□□□□ -0.55
TUBB3-209ENST00000555609 LST1O00453 97 aa11.61□□□□□ -0.55
TUBB3-209ENST00000555609 LINC00242Q5T6M2 205 aa11.61□□□□□ -0.55
TUBB3-209ENST00000555609 Q6ZSV7 163 aa11.61□□□□□ -0.55
TUBB3-209ENST00000555609 CR1P17927 2039 aa11.6□□□□□ -0.55
TUBB3-209ENST00000555609 TRGV1A0A0A0MS02 117 aa11.6□□□□□ -0.55
TUBB3-209ENST00000555609 UBE2WQ96B02 151 aa11.6□□□□□ -0.55
TUBB3-209ENST00000555609 Q96MF0 132 aa11.6□□□□□ -0.55
TUBB3-209ENST00000555609 MYO9AB2RTY4 2548 aa11.6□□□□□ -0.55
TUBB3-209ENST00000555609 H7C423 109 aa11.59□□□□□ -0.55
TUBB3-209ENST00000555609 HERV-K104P63124 156 aa11.59□□□□□ -0.55
TUBB3-209ENST00000555609 C2orf82Q6UX34 121 aa11.59□□□□□ -0.55
TUBB3-209ENST00000555609 A8MZ25 164 aa11.59□□□□□ -0.55
TUBB3-209ENST00000555609 TRAV26-1A0A087WT03 109 aa11.58□□□□□ -0.56
TUBB3-209ENST00000555609 COX6A2Q02221 97 aa11.58□□□□□ -0.56
TUBB3-209ENST00000555609 MRPL23Q16540 153 aaKnown RBP11.58□□□□□ -0.56
TUBB3-209ENST00000555609 DEFB121Q5J5C9 76 aa11.58□□□□□ -0.56
TUBB3-209ENST00000555609 LINC00308Q8TCZ7 52 aa11.58□□□□□ -0.56
TUBB3-209ENST00000555609 FAM110AQ9BQ89 295 aa11.58□□□□□ -0.56
TUBB3-209ENST00000555609 SORL1Q92673 2214 aa11.58□□□□□ -0.56
TUBB3-209ENST00000555609 TRAV8-4A0A0B4J246 113 aa11.57□□□□□ -0.56
TUBB3-209ENST00000555609 CCL24O00175 119 aa11.57□□□□□ -0.56
TUBB3-209ENST00000555609 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.57□□□□□ -0.56
TUBB3-209ENST00000555609 CITED1Q99966 193 aa11.57□□□□□ -0.56
TUBB3-209ENST00000555609 Q9H8V8 135 aa11.57□□□□□ -0.56
TUBB3-209ENST00000555609 CDC42SE2Q9NRR3 84 aa11.57□□□□□ -0.56
TUBB3-209ENST00000555609 CELSR1Q9NYQ6 3014 aa11.56□□□□□ -0.56
TUBB3-209ENST00000555609 SMIM1B2RUZ4 78 aa11.56□□□□□ -0.56
TUBB3-209ENST00000555609 Q6Q795 121 aa11.56□□□□□ -0.56
TUBB3-209ENST00000555609 CREBBPQ92793 2442 aa11.56□□□□□ -0.56
TUBB3-209ENST00000555609 OTOGQ6ZRI0 2925 aa11.55□□□□□ -0.56
TUBB3-209ENST00000555609 FAM240AA0A1B0GVK7 77 aa11.55□□□□□ -0.56
TUBB3-209ENST00000555609 ZNF469Q96JG9 3925 aaPredicted RBP11.55□□□□□ -0.56
TUBB3-209ENST00000555609 SNCGO76070 127 aa11.55□□□□□ -0.56
TUBB3-209ENST00000555609 NTM-AS1Q6ZSK4 140 aa11.55□□□□□ -0.56
TUBB3-209ENST00000555609 KRTAP1-3Q8IUG1 177 aa11.55□□□□□ -0.56
TUBB3-209ENST00000555609 C16orf74Q96GX8 76 aa11.55□□□□□ -0.56
TUBB3-209ENST00000555609 CFAP161Q6P656 301 aa11.54□□□□□ -0.56
TUBB3-209ENST00000555609 ZNF625Q96I27 306 aaPredicted RBP11.54□□□□□ -0.56
TUBB3-209ENST00000555609 CITED2Q99967 270 aaPredicted RBP11.54□□□□□ -0.56
TUBB3-209ENST00000555609 TMEM243Q9BU79 118 aa11.54□□□□□ -0.56
TUBB3-209ENST00000555609 TEX49A0A1B0GTD5 131 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 DNAJC9-AS1A6NH13 148 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 LINC00694P0DN24 101 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 NPC2P61916 151 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 Q6ZTI0 123 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 F5H768 121 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 UBE2L6O14933 153 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 TRBV6-4A0A1B0GX49 114 aa11.52□□□□□ -0.57
TUBB3-209ENST00000555609 COX7A2LO14548 114 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms