RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 NSD3Q9BZ95 1437 aa-1.21□□□□□ -2.6
SNX6-204ENST00000555541 SIX6O95475 246 aa-1.21□□□□□ -2.6
SNX6-204ENST00000555541 APOC3P02656 99 aa-1.21□□□□□ -2.6
SNX6-204ENST00000555541 COX8AP10176 69 aa-1.21□□□□□ -2.6
SNX6-204ENST00000555541 Q6ZUT4 128 aa-1.21□□□□□ -2.6
SNX6-204ENST00000555541 SPANXCQ9NY87 97 aa-1.21□□□□□ -2.6
SNX6-204ENST00000555541 APLNQ9ULZ1 77 aa-1.21□□□□□ -2.6
SNX6-204ENST00000555541 HSPB11Q9Y547 144 aa-1.21□□□□□ -2.6
SNX6-204ENST00000555541 DNAH3Q8TD57 4116 aa-1.21□□□□□ -2.6
SNX6-204ENST00000555541 HCG22E2RYF7 251 aa-1.22□□□□□ -2.6
SNX6-204ENST00000555541 UQCR11O14957 56 aa-1.22□□□□□ -2.6
SNX6-204ENST00000555541 IFNGP01579 166 aa-1.22□□□□□ -2.6
SNX6-204ENST00000555541 DBIP07108 87 aaKnown RBP-1.22□□□□□ -2.6
SNX6-204ENST00000555541 FABP1P07148 127 aa-1.22□□□□□ -2.6
SNX6-204ENST00000555541 TAC4Q86UU9 113 aa-1.22□□□□□ -2.6
SNX6-204ENST00000555541 AMELXQ99217 191 aa-1.22□□□□□ -2.6
SNX6-204ENST00000555541 GINS2Q9Y248 185 aa-1.22□□□□□ -2.6
SNX6-204ENST00000555541 LENEPQ9Y5L5 61 aa-1.22□□□□□ -2.6
SNX6-204ENST00000555541 SPTBN4Q9H254 2564 aa-1.22□□□□□ -2.61
SNX6-204ENST00000555541 TMEM2Q9UHN6 1383 aa-1.22□□□□□ -2.61
SNX6-204ENST00000555541 PXDNQ92626 1479 aa-1.23□□□□□ -2.61
SNX6-204ENST00000555541 ITPR3Q14573 2671 aa-1.23□□□□□ -2.61
SNX6-204ENST00000555541 TRAV13-2A0A0B4J235 113 aa-1.23□□□□□ -2.61
SNX6-204ENST00000555541 TRBV7-4A0A0J9YYF1 115 aa-1.23□□□□□ -2.61
SNX6-204ENST00000555541 F8VRH5 84 aa-1.23□□□□□ -2.61
SNX6-204ENST00000555541 NCR2O95944 276 aa-1.23□□□□□ -2.61
SNX6-204ENST00000555541 Q6AWC8 147 aa-1.23□□□□□ -2.61
SNX6-204ENST00000555541 TTC9CQ8N5M4 171 aa-1.23□□□□□ -2.61
SNX6-204ENST00000555541 TACC2O95359 2948 aa-1.23□□□□□ -2.61
SNX6-204ENST00000555541 HECTD1Q9ULT8 2610 aa-1.23□□□□□ -2.61
SNX6-204ENST00000555541 PKD1P98161 4303 aa-1.24□□□□□ -2.61
SNX6-204ENST00000555541 DNAH9Q9NYC9 4486 aa-1.24□□□□□ -2.61
SNX6-204ENST00000555541 IGLC6P0CF74 106 aa-1.24□□□□□ -2.61
SNX6-204ENST00000555541 TPPP2P59282 170 aa-1.24□□□□□ -2.61
SNX6-204ENST00000555541 SMIM15Q7Z3B0 74 aa-1.24□□□□□ -2.61
SNX6-204ENST00000555541 DDA1Q9BW61 102 aa-1.24□□□□□ -2.61
SNX6-204ENST00000555541 AKAP9Q99996 3911 aa-1.24□□□□□ -2.61
SNX6-204ENST00000555541 IFT140Q96RY7 1462 aa-1.24□□□□□ -2.61
SNX6-204ENST00000555541 SPAARA0A1B0GVQ0 90 aa-1.25□□□□□ -2.61
SNX6-204ENST00000555541 CPSF4LA6NMK7 179 aaKnown RBP-1.25□□□□□ -2.61
SNX6-204ENST00000555541 J3QR89 54 aa-1.25□□□□□ -2.61
SNX6-204ENST00000555541 MORN2Q502X0 79 aa-1.25□□□□□ -2.61
SNX6-204ENST00000555541 SCIMPQ6UWF3 145 aa-1.25□□□□□ -2.61
SNX6-204ENST00000555541 USMG5Q96IX5 58 aa-1.25□□□□□ -2.61
SNX6-204ENST00000555541 SHANK2Q9UPX8 1470 aa-1.25□□□□□ -2.61
SNX6-204ENST00000555541 FASNP49327 2511 aaKnown RBP-1.26□□□□□ -2.61
SNX6-204ENST00000555541 ZNF236Q9UL36 1845 aa-1.26□□□□□ -2.61
SNX6-204ENST00000555541 PIGBOS1A0A0B4J2F0 54 aa-1.26□□□□□ -2.61
SNX6-204ENST00000555541 ARPC5O15511 151 aa-1.26□□□□□ -2.61
SNX6-204ENST00000555541 SPRR2FQ96RM1 72 aa-1.26□□□□□ -2.61
SNX6-204ENST00000555541 SMIM3Q9BZL3 60 aa-1.26□□□□□ -2.61
SNX6-204ENST00000555541 SPANXA1Q9NS26 97 aa-1.26□□□□□ -2.61
SNX6-204ENST00000555541 ARHGEF12Q9NZN5 1544 aa-1.26□□□□□ -2.61
SNX6-204ENST00000555541 PRDM2Q13029 1718 aa-1.26□□□□□ -2.61
SNX6-204ENST00000555541 IGLC7A0M8Q6 106 aa-1.27□□□□□ -2.61
SNX6-204ENST00000555541 K7ERU9 68 aa-1.27□□□□□ -2.61
SNX6-204ENST00000555541 LINC00694P0DN24 101 aa-1.27□□□□□ -2.61
SNX6-204ENST00000555541 NEFHP12036 1026 aa-1.27□□□□□ -2.61
SNX6-204ENST00000555541 ALX1Q15699 326 aa-1.27□□□□□ -2.61
SNX6-204ENST00000555541 KCNRGQ8N5I3 272 aa-1.27□□□□□ -2.61
SNX6-204ENST00000555541 FDCSPQ8NFU4 85 aa-1.27□□□□□ -2.61
SNX6-204ENST00000555541 AIF1LQ9BQI0 150 aa-1.27□□□□□ -2.61
SNX6-204ENST00000555541 OVOS2A0A0J9YW53 1432 aa-1.27□□□□□ -2.61
SNX6-204ENST00000555541 DISP2A7MBM2 1401 aa-1.27□□□□□ -2.61
SNX6-204ENST00000555541 OVOS2Q6IE36 1432 aa-1.27□□□□□ -2.61
SNX6-204ENST00000555541 ZNF518AQ6AHZ1 1483 aa-1.27□□□□□ -2.61
SNX6-204ENST00000555541 SPG11Q96JI7 2443 aa-1.28□□□□□ -2.61
SNX6-204ENST00000555541 KDM5AP29375 1690 aaKnown RBP-1.28□□□□□ -2.61
SNX6-204ENST00000555541 LINC00959A0A1B0GUT2 108 aa-1.28□□□□□ -2.61
SNX6-204ENST00000555541 NAA60Q9H7X0 242 aa-1.28□□□□□ -2.61
SNX6-204ENST00000555541 NDUFA4L2Q9NRX3 87 aa-1.28□□□□□ -2.61
SNX6-204ENST00000555541 LINC01558Q9Y6Z2 57 aa-1.28□□□□□ -2.61
SNX6-204ENST00000555541 CUBNO60494 3623 aa-1.28□□□□□ -2.61
SNX6-204ENST00000555541 XIRP1Q702N8 1843 aaKnown RBP-1.29□□□□□ -2.62
SNX6-204ENST00000555541 PBRM1Q86U86 1689 aa-1.29□□□□□ -2.62
SNX6-204ENST00000555541 PPIP5K1Q6PFW1 1433 aa-1.29□□□□□ -2.62
SNX6-204ENST00000555541 M0R2Z0 102 aa-1.29□□□□□ -2.62
SNX6-204ENST00000555541 GUCA1AP43080 201 aaPredicted RBP-1.29□□□□□ -2.62
SNX6-204ENST00000555541 UBA52P62987 128 aaKnown RBP-1.29□□□□□ -2.62
SNX6-204ENST00000555541 C9orf62Q8N4C0 152 aa-1.29□□□□□ -2.62
SNX6-204ENST00000555541 TMEM263Q8WUH6 116 aaKnown RBP-1.29□□□□□ -2.62
SNX6-204ENST00000555541 DYNLRB1Q9NP97 96 aa-1.29□□□□□ -2.62
SNX6-204ENST00000555541 TEP1Q99973 2627 aaKnown RBP-1.29□□□□□ -2.62
SNX6-204ENST00000555541 ADGRB1O14514 1584 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 HMGXB3Q12766 1538 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 MYO18BQ8IUG5 2567 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 SFT2D2O95562 160 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 MGPP08493 103 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 S100A5P33763 92 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 C10orf113Q5VZT2 155 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 MGST2Q99735 147 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 GSKIPQ9P0R6 139 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 NWD2Q9ULI1 1742 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 HTTP42858 3142 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 KIF21AQ7Z4S6 1674 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 PI4KAP42356 2102 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 SETBP1Q9Y6X0 1596 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 TULP4Q9NRJ4 1543 aa-1.3□□□□□ -2.62
SNX6-204ENST00000555541 MYOM3Q5VTT5 1437 aa-1.31□□□□□ -2.62
SNX6-204ENST00000555541 ANKRD30AQ9BXX3 1397 aa-1.31□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms