RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 KRTDAPP60985 99 aa7.43□□□□□ -1.22
SHMT2-218ENST00000555213 Q6ZR54 194 aa7.43□□□□□ -1.22
SHMT2-218ENST00000555213 IFI27L1Q96BM0 104 aa7.43□□□□□ -1.22
SHMT2-218ENST00000555213 OPRPNQ99935 248 aaPredicted RBP7.43□□□□□ -1.22
SHMT2-218ENST00000555213 HSPB8Q9UJY1 196 aa7.43□□□□□ -1.22
SHMT2-218ENST00000555213 C1orf134Q5TEV5 83 aa7.42□□□□□ -1.22
SHMT2-218ENST00000555213 ZC2HC1BQ5TFG8 222 aa7.42□□□□□ -1.22
SHMT2-218ENST00000555213 PET117Q6UWS5 81 aa7.42□□□□□ -1.22
SHMT2-218ENST00000555213 ERASQ7Z444 233 aa7.42□□□□□ -1.22
SHMT2-218ENST00000555213 SCGB3A1Q96QR1 104 aa7.42□□□□□ -1.22
SHMT2-218ENST00000555213 TMEM243Q9BU79 118 aa7.42□□□□□ -1.22
SHMT2-218ENST00000555213 CYSLTR1Q9Y271 337 aa7.42□□□□□ -1.22
SHMT2-218ENST00000555213 PLECQ15149 4684 aaKnown RBP7.42□□□□□ -1.22
SHMT2-218ENST00000555213 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.41□□□□□ -1.22
SHMT2-218ENST00000555213 IGKV2-29A2NJV5 120 aaPredicted RBP7.41□□□□□ -1.22
SHMT2-218ENST00000555213 TMEM262E9PQX1 116 aa7.41□□□□□ -1.22
SHMT2-218ENST00000555213 UBE2L6O14933 153 aa7.41□□□□□ -1.22
SHMT2-218ENST00000555213 IGHV3-30P01768 117 aa7.41□□□□□ -1.22
SHMT2-218ENST00000555213 IGHV3-33P01772 117 aa7.41□□□□□ -1.22
SHMT2-218ENST00000555213 IGHV3-30-3P0DP02 117 aa7.41□□□□□ -1.22
SHMT2-218ENST00000555213 IGHV3-30-5P0DP03 117 aa7.41□□□□□ -1.22
SHMT2-218ENST00000555213 LINC01545Q5VT33 79 aa7.41□□□□□ -1.22
SHMT2-218ENST00000555213 MAP1LC3CQ9BXW4 147 aa7.41□□□□□ -1.22
SHMT2-218ENST00000555213 UBE2D4Q9Y2X8 147 aa7.41□□□□□ -1.22
SHMT2-218ENST00000555213 PYGO1Q9Y3Y4 419 aa7.41□□□□□ -1.22
SHMT2-218ENST00000555213 ATP5LO75964 103 aa7.4□□□□□ -1.22
SHMT2-218ENST00000555213 G0S2P27469 103 aa7.4□□□□□ -1.22
SHMT2-218ENST00000555213 C6orf223Q8N319 242 aa7.4□□□□□ -1.22
SHMT2-218ENST00000555213 BAALCQ8WXS3 180 aa7.4□□□□□ -1.22
SHMT2-218ENST00000555213 TIMM17AQ99595 171 aa7.4□□□□□ -1.22
SHMT2-218ENST00000555213 LINC01549A6NIU2 74 aa7.39□□□□□ -1.23
SHMT2-218ENST00000555213 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.39□□□□□ -1.23
SHMT2-218ENST00000555213 SCGB1D1O95968 90 aa7.39□□□□□ -1.23
SHMT2-218ENST00000555213 SMIM6P0DI80 62 aa7.39□□□□□ -1.23
SHMT2-218ENST00000555213 ODF1Q14990 250 aa7.39□□□□□ -1.23
SHMT2-218ENST00000555213 NFE4Q86UQ8 179 aa7.39□□□□□ -1.23
SHMT2-218ENST00000555213 TMEM141Q96I45 108 aa7.39□□□□□ -1.23
SHMT2-218ENST00000555213 PMCHL2Q9BQD1 86 aa7.39□□□□□ -1.23
SHMT2-218ENST00000555213 TIMM21Q9BVV7 248 aa7.39□□□□□ -1.23
SHMT2-218ENST00000555213 KRTAP1-5Q9BYS1 174 aa7.39□□□□□ -1.23
SHMT2-218ENST00000555213 SACSQ9NZJ4 4579 aa7.38□□□□□ -1.23
SHMT2-218ENST00000555213 IGLV4-3A0A075B6K6 122 aa7.38□□□□□ -1.23
SHMT2-218ENST00000555213 TRAV12-1A0A0B4J245 112 aa7.38□□□□□ -1.23
SHMT2-218ENST00000555213 PRSS29PA6NIE9 313 aa7.38□□□□□ -1.23
SHMT2-218ENST00000555213 PRSS1P07477 247 aa7.38□□□□□ -1.23
SHMT2-218ENST00000555213 GAGE6Q13070 117 aa7.38□□□□□ -1.23
SHMT2-218ENST00000555213 AMMECR1LQ6DCA0 310 aa7.38□□□□□ -1.23
SHMT2-218ENST00000555213 TEX43Q6ZNM6 134 aa7.38□□□□□ -1.23
SHMT2-218ENST00000555213 MRPL52Q86TS9 123 aaKnown RBP7.38□□□□□ -1.23
SHMT2-218ENST00000555213 AMELXQ99217 191 aa7.38□□□□□ -1.23
SHMT2-218ENST00000555213 C12orf57Q99622 126 aa7.38□□□□□ -1.23
SHMT2-218ENST00000555213 CST9LQ9H4G1 147 aa7.38□□□□□ -1.23
SHMT2-218ENST00000555213 IBA57-AS1B1ANH7 110 aa7.37□□□□□ -1.23
SHMT2-218ENST00000555213 H7C423 109 aa7.37□□□□□ -1.23
SHMT2-218ENST00000555213 CRPP02741 224 aa7.37□□□□□ -1.23
SHMT2-218ENST00000555213 FGF6P10767 208 aa7.37□□□□□ -1.23
SHMT2-218ENST00000555213 SMAGPQ0VAQ4 97 aa7.37□□□□□ -1.23
SHMT2-218ENST00000555213 MPV17L2Q567V2 206 aa7.37□□□□□ -1.23
SHMT2-218ENST00000555213 LINC00336Q6ZUF6 198 aa7.37□□□□□ -1.23
SHMT2-218ENST00000555213 CSDC2Q9Y534 153 aaKnown RBP7.37□□□□□ -1.23
SHMT2-218ENST00000555213 LYSTQ99698 3801 aa7.36□□□□□ -1.23
SHMT2-218ENST00000555213 DNAH1Q9P2D7 4330 aa7.36□□□□□ -1.23
SHMT2-218ENST00000555213 TRAV8-3A0A0A6YYJ7 113 aa7.36□□□□□ -1.23
SHMT2-218ENST00000555213 H0Y8G0 127 aa7.36□□□□□ -1.23
SHMT2-218ENST00000555213 ANGP03950 147 aaKnown RBP7.36□□□□□ -1.23
SHMT2-218ENST00000555213 NPSP0C0P6 89 aa7.36□□□□□ -1.23
SHMT2-218ENST00000555213 RBX1P62877 108 aa7.36□□□□□ -1.23
SHMT2-218ENST00000555213 MRPS36P82909 103 aaKnown RBP7.36□□□□□ -1.23
SHMT2-218ENST00000555213 MAJINQ3KP22 176 aa7.36□□□□□ -1.23
SHMT2-218ENST00000555213 Q8N3U1 123 aa7.36□□□□□ -1.23
SHMT2-218ENST00000555213 RMI2Q96E14 147 aa7.36□□□□□ -1.23
SHMT2-218ENST00000555213 Q9HAA7 133 aa7.36□□□□□ -1.23
SHMT2-218ENST00000555213 CDC42SE2Q9NRR3 84 aa7.36□□□□□ -1.23
SHMT2-218ENST00000555213 SPANXA1Q9NS26 97 aa7.36□□□□□ -1.23
SHMT2-218ENST00000555213 KLK12Q9UKR0 248 aa7.36□□□□□ -1.23
SHMT2-218ENST00000555213 IGLV4-69A0A075B6H9 119 aa7.35□□□□□ -1.23
SHMT2-218ENST00000555213 IGLV4-60A0A075B6I1 120 aa7.35□□□□□ -1.23
SHMT2-218ENST00000555213 ZNF25P17030 456 aaPredicted RBP7.35□□□□□ -1.23
SHMT2-218ENST00000555213 PMVKQ15126 192 aa7.35□□□□□ -1.23
SHMT2-218ENST00000555213 Q6ZN92 141 aa7.35□□□□□ -1.23
SHMT2-218ENST00000555213 ATOH7Q8N100 152 aa7.35□□□□□ -1.23
SHMT2-218ENST00000555213 ZNF664Q8N3J9 261 aa7.35□□□□□ -1.23
SHMT2-218ENST00000555213 TMEM101Q96IK0 257 aa7.35□□□□□ -1.23
SHMT2-218ENST00000555213 MRPL35Q9NZE8 188 aaKnown RBP7.35□□□□□ -1.23
SHMT2-218ENST00000555213 VPS13DQ5THJ4 4388 aa7.34□□□□□ -1.23
SHMT2-218ENST00000555213 A0A1B0GUV1 79 aa7.34□□□□□ -1.23
SHMT2-218ENST00000555213 PSCAO43653 123 aa7.34□□□□□ -1.23
SHMT2-218ENST00000555213 RNASE13Q5GAN3 156 aaKnown RBP7.34□□□□□ -1.23
SHMT2-218ENST00000555213 Q6ZUT4 128 aa7.34□□□□□ -1.23
SHMT2-218ENST00000555213 UBE2WQ96B02 151 aa7.34□□□□□ -1.23
SHMT2-218ENST00000555213 TM2D2Q9BX73 214 aa7.34□□□□□ -1.23
SHMT2-218ENST00000555213 COX11Q9Y6N1 276 aa7.34□□□□□ -1.23
SHMT2-218ENST00000555213 RTL8CO15255 209 aa7.33□□□□□ -1.24
SHMT2-218ENST00000555213 OR5A1Q8NGJ0 315 aa7.33□□□□□ -1.24
SHMT2-218ENST00000555213 VCX2Q9H322 139 aa7.33□□□□□ -1.24
SHMT2-218ENST00000555213 CHTOPQ9Y3Y2 248 aaKnown RBP7.33□□□□□ -1.24
SHMT2-218ENST00000555213 hDV102S1A0JD36 115 aa7.32□□□□□ -1.24
SHMT2-218ENST00000555213 F8VRH5 84 aa7.32□□□□□ -1.24
SHMT2-218ENST00000555213 MIAQ16674 131 aa7.32□□□□□ -1.24
SHMT2-218ENST00000555213 DGAT2L7PQ6IED9 249 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms