RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 NKX2-5P52952 324 aaPredicted RBP2.7□□□□□ -1.98
VTI1B-203ENST00000554636 SSTP61278 116 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 IQCJQ1A5X6 159 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 Q5VSD8 79 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 KRTAP26-1Q6PEX3 210 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 LYZL1Q6UWQ5 148 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 ENHOQ6UWT2 76 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 Q6ZSA8 131 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 C15orf54Q8N8G6 183 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 OCC1Q8TAD7 63 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 GTSF1Q8WW33 167 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 TMEM70Q9BUB7 260 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 RNASE7Q9H1E1 156 aaKnown RBP2.7□□□□□ -1.98
VTI1B-203ENST00000554636 DPH3P1Q9H4G8 78 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 RPP21Q9H633 154 aaKnown RBP2.7□□□□□ -1.98
VTI1B-203ENST00000554636 BIN3Q9NQY0 253 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 URGCP-MRPS24S4R325 110 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.69□□□□□ -1.98
VTI1B-203ENST00000554636 A0A087WX48 190 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 IGHV1-24A0A0C4DH33 117 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 XKRY2A2RUG3 117 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 EPM2AB3EWF7 344 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 TMEM262E9PQX1 116 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 F2Z2F3 143 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 NDUFS6O75380 124 aaKnown RBP2.69□□□□□ -1.98
VTI1B-203ENST00000554636 TRGC1P0CF51 173 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 NTF3P20783 257 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 PKIAP61925 76 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 RBX1P62877 108 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 Q0VG73 95 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 ELOBQ15370 118 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 TMEM97Q5BJF2 176 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 RASL11AQ6T310 242 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 Q6ZRP5 223 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 FAM231DQ6ZW35 169 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 Q8N976 141 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 RMI2Q96E14 147 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 CHCHD5Q9BSY4 110 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 PRR34Q9NV39 138 aa2.69□□□□□ -1.98
VTI1B-203ENST00000554636 HMCN2Q8NDA2 5059 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 TNXBP22105 4242 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 TRBV25-1A0A075B6N4 114 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 TRAV26-2A0A0B4J265 109 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 H7C1H1 209 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 CRPP02741 224 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 SMR3BP02814 79 aaPredicted RBP2.68□□□□□ -1.98
VTI1B-203ENST00000554636 ANGP03950 147 aaKnown RBP2.68□□□□□ -1.98
VTI1B-203ENST00000554636 SRP19P09132 144 aaKnown RBP2.68□□□□□ -1.98
VTI1B-203ENST00000554636 MIAQ16674 131 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 LINC01620Q4KN68 170 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 KCNIP4Q6PIL6 250 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 CLPSL2Q6UWE3 100 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.68□□□□□ -1.98
VTI1B-203ENST00000554636 GATD1Q8NB37 220 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 C20orf203Q8NBC4 194 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 FRZBQ92765 325 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 PGLYRP4Q96LB8 373 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 FAM210AQ96ND0 272 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 TMEM243Q9BU79 118 aa2.68□□□□□ -1.98
VTI1B-203ENST00000554636 IGLV4-60A0A075B6I1 120 aa2.67□□□□□ -1.98
VTI1B-203ENST00000554636 GATCO43716 136 aaKnown RBP2.67□□□□□ -1.98
VTI1B-203ENST00000554636 HLA-DQA1P01909 254 aa2.67□□□□□ -1.98
VTI1B-203ENST00000554636 INAFM2P0DMQ5 153 aa2.67□□□□□ -1.98
VTI1B-203ENST00000554636 CEBPGP53567 150 aa2.67□□□□□ -1.98
VTI1B-203ENST00000554636 FOXA3P55318 350 aaPredicted RBP2.67□□□□□ -1.98
VTI1B-203ENST00000554636 SCXQ7RTU7 201 aa2.67□□□□□ -1.98
VTI1B-203ENST00000554636 LINC01551Q86U37 167 aa2.67□□□□□ -1.98
VTI1B-203ENST00000554636 LINC00269Q8N2A0 174 aa2.67□□□□□ -1.98
VTI1B-203ENST00000554636 DEFB104AQ8WTQ1 72 aa2.67□□□□□ -1.98
VTI1B-203ENST00000554636 RPL39LQ96EH5 51 aaKnown RBP2.67□□□□□ -1.98
VTI1B-203ENST00000554636 RNF185Q96GF1 192 aa2.67□□□□□ -1.98
VTI1B-203ENST00000554636 SMIM7Q9BQ49 75 aa2.67□□□□□ -1.98
VTI1B-203ENST00000554636 NIT2Q9NQR4 276 aa2.67□□□□□ -1.98
VTI1B-203ENST00000554636 OSTCQ9NRP0 149 aa2.67□□□□□ -1.98
VTI1B-203ENST00000554636 DMBT1Q9UGM3 2413 aaPredicted RBP2.67□□□□□ -1.98
VTI1B-203ENST00000554636 TRBV6-5A0A0K0K1A5 114 aa2.66□□□□□ -1.98
VTI1B-203ENST00000554636 ZNF727A8MUV8 499 aa2.66□□□□□ -1.98
VTI1B-203ENST00000554636 HIGD1CA8MV81 97 aa2.66□□□□□ -1.98
VTI1B-203ENST00000554636 A8MWL6 223 aa2.66□□□□□ -1.98
VTI1B-203ENST00000554636 C9JQL5 133 aa2.66□□□□□ -1.98
VTI1B-203ENST00000554636 APCSP02743 223 aa2.66□□□□□ -1.98
VTI1B-203ENST00000554636 RPL23P62829 140 aaKnown RBP2.66□□□□□ -1.98
VTI1B-203ENST00000554636 REG3AQ06141 175 aa2.66□□□□□ -1.98
VTI1B-203ENST00000554636 COTL1Q14019 142 aa2.66□□□□□ -1.98
VTI1B-203ENST00000554636 TSKUQ8WUA8 353 aa2.66□□□□□ -1.98
VTI1B-203ENST00000554636 ISOC2Q96AB3 205 aa2.66□□□□□ -1.98
VTI1B-203ENST00000554636 EIF5A2Q9GZV4 153 aaKnown RBP2.66□□□□□ -1.98
VTI1B-203ENST00000554636 V9GYV3 84 aa2.66□□□□□ -1.98
VTI1B-203ENST00000554636 IGLV10-54A0A075B6I4 117 aa2.65□□□□□ -1.99
VTI1B-203ENST00000554636 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.65□□□□□ -1.99
VTI1B-203ENST00000554636 TRAV8-4A0A0B4J246 113 aa2.65□□□□□ -1.99
VTI1B-203ENST00000554636 A0A1B0GUT8 65 aa2.65□□□□□ -1.99
VTI1B-203ENST00000554636 IGKV2-29A2NJV5 120 aaPredicted RBP2.65□□□□□ -1.99
VTI1B-203ENST00000554636 FAM231BA6NCW3 169 aa2.65□□□□□ -1.99
VTI1B-203ENST00000554636 SDHAF1A6NFY7 115 aa2.65□□□□□ -1.99
VTI1B-203ENST00000554636 UBE2L6O14933 153 aa2.65□□□□□ -1.99
VTI1B-203ENST00000554636 NCR2O95944 276 aa2.65□□□□□ -1.99
VTI1B-203ENST00000554636 ESDP10768 282 aa2.65□□□□□ -1.99
VTI1B-203ENST00000554636 RAB4AP20338 218 aa2.65□□□□□ -1.99
VTI1B-203ENST00000554636 RPS10P46783 165 aaKnown RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms