RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 TRBV6-8A0A0A6YYG3 113 aa11.05□□□□□ -0.64
NEK9-204ENST00000554258 I3L3M4 83 aa11.05□□□□□ -0.64
NEK9-204ENST00000554258 VCYO14598 125 aa11.05□□□□□ -0.64
NEK9-204ENST00000554258 ALKBH7Q9BT30 221 aaPredicted RBP11.05□□□□□ -0.64
NEK9-204ENST00000554258 IQCJQ1A5X6 159 aa11.04□□□□□ -0.64
NEK9-204ENST00000554258 Q6ZRU5 148 aa11.04□□□□□ -0.64
NEK9-204ENST00000554258 Q9HAA7 133 aa11.04□□□□□ -0.64
NEK9-204ENST00000554258 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.03□□□□□ -0.64
NEK9-204ENST00000554258 RAB5AP20339 215 aa11.03□□□□□ -0.64
NEK9-204ENST00000554258 TSHBP01222 138 aa11.02□□□□□ -0.65
NEK9-204ENST00000554258 PMCHP20382 165 aa11.02□□□□□ -0.65
NEK9-204ENST00000554258 COTL1Q14019 142 aa11.02□□□□□ -0.65
NEK9-204ENST00000554258 WFDC2Q14508 124 aa11.02□□□□□ -0.65
NEK9-204ENST00000554258 SMIM2Q9BVW6 85 aa11.02□□□□□ -0.65
NEK9-204ENST00000554258 LPAP08519 4548 aa11.01□□□□□ -0.65
NEK9-204ENST00000554258 TRAV8-6A0A0B4J262 113 aa11.01□□□□□ -0.65
NEK9-204ENST00000554258 MAP1LC3AQ9H492 121 aa11.01□□□□□ -0.65
NEK9-204ENST00000554258 IGHV1-24A0A0C4DH33 117 aa11□□□□□ -0.65
NEK9-204ENST00000554258 ESDP10768 282 aa11□□□□□ -0.65
NEK9-204ENST00000554258 TRBV25-1A0A075B6N4 114 aa10.99□□□□□ -0.65
NEK9-204ENST00000554258 TCAPO15273 167 aa10.99□□□□□ -0.65
NEK9-204ENST00000554258 Q8N8P6 123 aa10.99□□□□□ -0.65
NEK9-204ENST00000554258 CHCHD7Q9BUK0 85 aa10.99□□□□□ -0.65
NEK9-204ENST00000554258 LECT2O14960 151 aa10.98□□□□□ -0.65
NEK9-204ENST00000554258 TRGC2P03986 189 aa10.98□□□□□ -0.65
NEK9-204ENST00000554258 ODF1Q14990 250 aa10.98□□□□□ -0.65
NEK9-204ENST00000554258 LINC01556Q5JQF7 62 aa10.98□□□□□ -0.65
NEK9-204ENST00000554258 NIT1Q86X76 327 aa10.98□□□□□ -0.65
NEK9-204ENST00000554258 KIR2DL4Q99706 377 aa10.98□□□□□ -0.65
NEK9-204ENST00000554258 TMEM243Q9BU79 118 aa10.98□□□□□ -0.65
NEK9-204ENST00000554258 NXT2Q9NPJ8 142 aaKnown RBP10.98□□□□□ -0.65
NEK9-204ENST00000554258 A0A0U1RQV1 116 aa10.97□□□□□ -0.65
NEK9-204ENST00000554258 LINC01546A6NGU7 62 aa10.97□□□□□ -0.65
NEK9-204ENST00000554258 IBA57-AS1B1ANH7 110 aa10.97□□□□□ -0.65
NEK9-204ENST00000554258 K7EMI3 77 aa10.97□□□□□ -0.65
NEK9-204ENST00000554258 AMTP48728 403 aa10.97□□□□□ -0.65
NEK9-204ENST00000554258 LOC389332A0A1B0GUA5 103 aa10.96□□□□□ -0.65
NEK9-204ENST00000554258 H7C423 109 aa10.96□□□□□ -0.65
NEK9-204ENST00000554258 PKIAP61925 76 aa10.96□□□□□ -0.65
NEK9-204ENST00000554258 C18orf32Q8TCD1 76 aa10.96□□□□□ -0.65
NEK9-204ENST00000554258 IFI27P40305 119 aaPredicted RBP10.95□□□□□ -0.66
NEK9-204ENST00000554258 CHCHD5Q9BSY4 110 aa10.95□□□□□ -0.66
NEK9-204ENST00000554258 A0A1B0GUV1 79 aa10.94□□□□□ -0.66
NEK9-204ENST00000554258 FCER1GP30273 86 aa10.94□□□□□ -0.66
NEK9-204ENST00000554258 TM2D2Q9BX73 214 aa10.94□□□□□ -0.66
NEK9-204ENST00000554258 GAGE6Q13070 117 aa10.93□□□□□ -0.66
NEK9-204ENST00000554258 C20orf203Q8NBC4 194 aa10.93□□□□□ -0.66
NEK9-204ENST00000554258 PRSS3P2Q8NHM4 247 aa10.93□□□□□ -0.66
NEK9-204ENST00000554258 URB1-AS1Q96HZ7 61 aa10.93□□□□□ -0.66
NEK9-204ENST00000554258 RBX1P62877 108 aa10.92□□□□□ -0.66
NEK9-204ENST00000554258 Q0VG73 95 aa10.92□□□□□ -0.66
NEK9-204ENST00000554258 MRPL52Q86TS9 123 aaKnown RBP10.92□□□□□ -0.66
NEK9-204ENST00000554258 Q8N3U1 123 aa10.92□□□□□ -0.66
NEK9-204ENST00000554258 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.91□□□□□ -0.66
NEK9-204ENST00000554258 IGKV2-29A2NJV5 120 aaPredicted RBP10.91□□□□□ -0.66
NEK9-204ENST00000554258 TMEM262E9PQX1 116 aa10.91□□□□□ -0.66
NEK9-204ENST00000554258 LAGE3Q14657 143 aa10.91□□□□□ -0.66
NEK9-204ENST00000554258 ORMDL2Q53FV1 153 aa10.91□□□□□ -0.66
NEK9-204ENST00000554258 MPV17L2Q567V2 206 aa10.91□□□□□ -0.66
NEK9-204ENST00000554258 A0A087WX48 190 aa10.9□□□□□ -0.66
NEK9-204ENST00000554258 LINC00614P0C842 121 aa10.9□□□□□ -0.66
NEK9-204ENST00000554258 TIMM21Q9BVV7 248 aa10.9□□□□□ -0.66
NEK9-204ENST00000554258 CSDC2Q9Y534 153 aaKnown RBP10.9□□□□□ -0.66
NEK9-204ENST00000554258 UBE2L6O14933 153 aa10.89□□□□□ -0.67
NEK9-204ENST00000554258 IGHV3-30P01768 117 aa10.89□□□□□ -0.67
NEK9-204ENST00000554258 IGHV3-33P01772 117 aa10.89□□□□□ -0.67
NEK9-204ENST00000554258 IGHV3-30-3P0DP02 117 aa10.89□□□□□ -0.67
NEK9-204ENST00000554258 IGHV3-30-5P0DP03 117 aa10.89□□□□□ -0.67
NEK9-204ENST00000554258 FGF6P10767 208 aa10.89□□□□□ -0.67
NEK9-204ENST00000554258 ZNF25P17030 456 aaPredicted RBP10.89□□□□□ -0.67
NEK9-204ENST00000554258 TMEM18Q96B42 140 aa10.89□□□□□ -0.67
NEK9-204ENST00000554258 IGLV4-60A0A075B6I1 120 aa10.88□□□□□ -0.67
NEK9-204ENST00000554258 RAB5BP61020 215 aa10.88□□□□□ -0.67
NEK9-204ENST00000554258 FA2HQ7L5A8 372 aa10.88□□□□□ -0.67
NEK9-204ENST00000554258 Q8N976 141 aa10.88□□□□□ -0.67
NEK9-204ENST00000554258 UBE2D4Q9Y2X8 147 aa10.88□□□□□ -0.67
NEK9-204ENST00000554258 G0S2P27469 103 aa10.87□□□□□ -0.67
NEK9-204ENST00000554258 RPL39P62891 51 aaKnown RBP10.87□□□□□ -0.67
NEK9-204ENST00000554258 SMAGPQ0VAQ4 97 aa10.87□□□□□ -0.67
NEK9-204ENST00000554258 FAM104AQ969W3 186 aa10.87□□□□□ -0.67
NEK9-204ENST00000554258 AP5S1Q9NUS5 200 aa10.87□□□□□ -0.67
NEK9-204ENST00000554258 PRR34Q9NV39 138 aa10.87□□□□□ -0.67
NEK9-204ENST00000554258 PYGO1Q9Y3Y4 419 aa10.87□□□□□ -0.67
NEK9-204ENST00000554258 FSIP2Q5CZC0 6907 aa10.86□□□□□ -0.67
NEK9-204ENST00000554258 HIST1H2BKO60814 126 aa10.86□□□□□ -0.67
NEK9-204ENST00000554258 HIST1H2BJP06899 126 aa10.86□□□□□ -0.67
NEK9-204ENST00000554258 HIST1H2BOP23527 126 aa10.86□□□□□ -0.67
NEK9-204ENST00000554258 HIST1H2BBP33778 126 aa10.86□□□□□ -0.67
NEK9-204ENST00000554258 HIST1H2BDP58876 126 aa10.86□□□□□ -0.67
NEK9-204ENST00000554258 HIST1H2BCP62807 126 aa10.86□□□□□ -0.67
NEK9-204ENST00000554258 HIST2H2BEQ16778 126 aa10.86□□□□□ -0.67
NEK9-204ENST00000554258 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.86□□□□□ -0.67
NEK9-204ENST00000554258 HIST1H2BHQ93079 126 aa10.86□□□□□ -0.67
NEK9-204ENST00000554258 CHCHD1Q96BP2 118 aaKnown RBP10.86□□□□□ -0.67
NEK9-204ENST00000554258 HIST1H2BNQ99877 126 aa10.86□□□□□ -0.67
NEK9-204ENST00000554258 HIST1H2BMQ99879 126 aa10.86□□□□□ -0.67
NEK9-204ENST00000554258 KLK12Q9UKR0 248 aa10.86□□□□□ -0.67
NEK9-204ENST00000554258 LCE2AQ5TA79 106 aaPredicted RBP10.85□□□□□ -0.67
NEK9-204ENST00000554258 AMMECR1LQ6DCA0 310 aa10.85□□□□□ -0.67
NEK9-204ENST00000554258 C2orf66Q6UXQ4 117 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms