RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 TRAV1-1A0A0B4J248 108 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 C8orf87E5RJ46 101 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 DEDDO75618 318 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 NDUFA3O95167 84 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 IGKV1D-33P01593 117 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 IGKV1-33P01594 117 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 DEFB112Q30KQ8 113 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 CFAP126Q5VTH2 177 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 Q6ZQT7 251 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 CYP2G1PQ6ZSU1 146 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 LYZL2Q7Z4W2 148 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 TEN1Q86WV5 123 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 BAGE3Q86Y29 109 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 BAGE2Q86Y30 109 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 FAM213BQ8TBF2 198 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 TMEM167AQ8TBQ9 72 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 C2orf50Q96LR7 162 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 C18orf15Q96N68 181 aa3.13□□□□□ -1.91
FOXN3-206ENST00000554005 NAV3Q8IVL0 2385 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 ACANP16112 2415 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 SMIM26A0A096LP01 95 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 IGHV3-66A0A0C4DH42 116 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 KNCNA6PVL3 124 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 INS-IGF2F8WCM5 200 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 UPK2O00526 184 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 TLX1NBP0CAT3 122 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 SAA1P0DJI8 122 aaPredicted RBP3.12□□□□□ -1.91
FOXN3-206ENST00000554005 CD24P25063 80 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 UBE2G1P62253 170 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 CCL20P78556 96 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 TMEM136Q6ZRR5 245 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 SMR3AQ99954 134 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 CHAC1Q9BUX1 264 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 TMEM14BQ9NUH8 114 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 HHLA3Q9XRX5 114 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 SERP1Q9Y6X1 66 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 HIVEP2P31629 2446 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 TLN2Q9Y4G6 2542 aa3.12□□□□□ -1.91
FOXN3-206ENST00000554005 IGKV2D-24A0A075B6R9 120 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 TRAV3A0A0B4J244 114 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 TRBV7-6A0A0J9YX20 115 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 MDFIC2A0A1B0GVS7 189 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 C2orf70A6NJV1 201 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 IGLL5B9A064 214 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 H3BUX3 64 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 RTL8CO15255 209 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 TCL1BO95988 128 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 CD7P09564 240 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 HLA-DRB4P13762 266 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 PLGLAQ15195 96 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 KRTAP13-3Q3SY46 172 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 C5orf56Q8N8D9 126 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 C15orf56Q8N910 161 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 C15orf53Q8NAA6 179 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 BRK1Q8WUW1 75 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 LINC01600Q96MT4 127 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 DSCR8Q96T75 97 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 TM2D3Q9BRN9 247 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 FAM103A1Q9BTL3 118 aaKnown RBP3.11□□□□□ -1.91
FOXN3-206ENST00000554005 HLA-DRB4X5D2U9 266 aa3.11□□□□□ -1.91
FOXN3-206ENST00000554005 SONP18583 2426 aaKnown RBP3.1□□□□□ -1.91
FOXN3-206ENST00000554005 A0A1B0GXF2 115 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 F2Z2F3 143 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 SYNGR2O43760 224 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 IGKCP01834 107 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 APCSP02743 223 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 RPL27AP46776 148 aaKnown RBP3.1□□□□□ -1.91
FOXN3-206ENST00000554005 RPL23P62829 140 aaKnown RBP3.1□□□□□ -1.91
FOXN3-206ENST00000554005 PRCDQ00LT1 54 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 ERCC8Q13216 396 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 LGALS9BQ3B8N2 356 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 EBLN2Q6P2I7 272 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 AMN1Q8IY45 258 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 RNF182Q8N6D2 247 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 TSKUQ8WUA8 353 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 ODF3Q96PU9 254 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 UPK3BQ9BT76 320 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 C11orf1Q9H5F2 150 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 RPP21Q9H633 154 aaKnown RBP3.1□□□□□ -1.91
FOXN3-206ENST00000554005 NDUFA4L2Q9NRX3 87 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 SLC39A9Q9NUM3 307 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 TP73-AS1Q9UF72 201 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 TEP1Q99973 2627 aaKnown RBP3.1□□□□□ -1.91
FOXN3-206ENST00000554005 ZANQ9Y493 2812 aa3.1□□□□□ -1.91
FOXN3-206ENST00000554005 FAM24AA6NFZ4 105 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 CEBPZOSA8MTT3 80 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 A8MWV9 139 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 E7EUB6 86 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 LINC01619G3V211 115 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 H3BT86 120 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 SSSCA1O60232 199 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 PRH1P02810 166 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 CSN1S1P47710 185 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 LINC00315P59091 139 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 HBG1P69891 147 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 HBG2P69892 147 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 FXYD3Q14802 87 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 LY6EQ16553 131 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 C10orf55Q5SWW7 151 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 UNQ9165/PRO28630Q6UXU0 137 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms