RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ASIPP42127 132 aa6.11□□□□□ -1.43
TDP1-208ENST00000553989 KRTAP10-2P60368 255 aa6.11□□□□□ -1.43
TDP1-208ENST00000553989 RPL32P62910 135 aaKnown RBP6.11□□□□□ -1.43
TDP1-208ENST00000553989 ESRGQ1W209 222 aa6.11□□□□□ -1.43
TDP1-208ENST00000553989 UPK3BQ9BT76 320 aa6.11□□□□□ -1.43
TDP1-208ENST00000553989 HHLA3Q9XRX5 114 aa6.11□□□□□ -1.43
TDP1-208ENST00000553989 TRAV12-3A0A0B4J271 114 aa6.1□□□□□ -1.43
TDP1-208ENST00000553989 H7C1H1 209 aa6.1□□□□□ -1.43
TDP1-208ENST00000553989 NRACQ8N912 160 aa6.1□□□□□ -1.43
TDP1-208ENST00000553989 FAM19A4Q96LR4 140 aa6.1□□□□□ -1.43
TDP1-208ENST00000553989 DPH3P1Q9H4G8 78 aa6.1□□□□□ -1.43
TDP1-208ENST00000553989 HSPG2P98160 4391 aa6.1□□□□□ -1.43
TDP1-208ENST00000553989 TRGV1A0A0A0MS02 117 aa6.09□□□□□ -1.43
TDP1-208ENST00000553989 EPM2AB3EWF7 344 aa6.09□□□□□ -1.43
TDP1-208ENST00000553989 H3BNG1 76 aa6.09□□□□□ -1.43
TDP1-208ENST00000553989 K7ERU9 68 aa6.09□□□□□ -1.43
TDP1-208ENST00000553989 NMUP48645 174 aa6.09□□□□□ -1.43
TDP1-208ENST00000553989 LINC00315P59091 139 aa6.09□□□□□ -1.43
TDP1-208ENST00000553989 PAPPA-AS1Q5QFB9 102 aa6.09□□□□□ -1.43
TDP1-208ENST00000553989 Q6ZTI0 123 aa6.09□□□□□ -1.43
TDP1-208ENST00000553989 LINC00612Q8N6U2 182 aa6.09□□□□□ -1.43
TDP1-208ENST00000553989 OR5A1Q8NGJ0 315 aa6.09□□□□□ -1.43
TDP1-208ENST00000553989 C11orf21Q9P2W6 132 aa6.09□□□□□ -1.43
TDP1-208ENST00000553989 PHLDA3Q9Y5J5 127 aa6.09□□□□□ -1.43
TDP1-208ENST00000553989 SUMO2P61956 95 aaKnown RBP6.08□□□□□ -1.44
TDP1-208ENST00000553989 ERASQ7Z444 233 aa6.08□□□□□ -1.44
TDP1-208ENST00000553989 ZFAND2AQ8N6M9 145 aa6.08□□□□□ -1.44
TDP1-208ENST00000553989 TOMM6Q96B49 74 aa6.08□□□□□ -1.44
TDP1-208ENST00000553989 C18orf15Q96N68 181 aa6.08□□□□□ -1.44
TDP1-208ENST00000553989 ODF3Q96PU9 254 aa6.08□□□□□ -1.44
TDP1-208ENST00000553989 SCGB3A1Q96QR1 104 aa6.08□□□□□ -1.44
TDP1-208ENST00000553989 SMIM2Q9BVW6 85 aa6.08□□□□□ -1.44
TDP1-208ENST00000553989 TM2D2Q9BX73 214 aa6.08□□□□□ -1.44
TDP1-208ENST00000553989 A0A096LPF7 62 aa6.07□□□□□ -1.44
TDP1-208ENST00000553989 VCYO14598 125 aa6.07□□□□□ -1.44
TDP1-208ENST00000553989 FABP2P12104 132 aa6.07□□□□□ -1.44
TDP1-208ENST00000553989 RNASE4P34096 147 aaKnown RBP6.07□□□□□ -1.44
TDP1-208ENST00000553989 FUSP35637 526 aaKnown RBP eCLIP6.07□□□□□ -1.44
TDP1-208ENST00000553989 DAZ2Q13117 558 aaKnown RBP6.07□□□□□ -1.44
TDP1-208ENST00000553989 Q6ZVH6 145 aa6.07□□□□□ -1.44
TDP1-208ENST00000553989 CST9LQ9H4G1 147 aa6.07□□□□□ -1.44
TDP1-208ENST00000553989 ICOSQ9Y6W8 199 aa6.07□□□□□ -1.44
TDP1-208ENST00000553989 LRP1BQ9NZR2 4599 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 TRAV8-6A0A0B4J262 113 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 F8VRH5 84 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 H3BVH4 76 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 K7EP34 96 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 PAX4O43316 350 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 NXPH4O95158 308 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 IGHV3-53P01767 116 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 GATA1P15976 413 aaPredicted RBP6.06□□□□□ -1.44
TDP1-208ENST00000553989 MALP21145 153 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 ANXA2RQ3ZCQ2 193 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 OCIAD2Q56VL3 154 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 ZC2HC1BQ5TFG8 222 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 UFSP1Q6NVU6 142 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 FAM159AQ6UWV7 190 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 PCP2Q8IVA1 136 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 TMEM141Q96I45 108 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 VSIG2Q96IQ7 327 aa6.06□□□□□ -1.44
TDP1-208ENST00000553989 CHTOPQ9Y3Y2 248 aaKnown RBP6.06□□□□□ -1.44
TDP1-208ENST00000553989 A0A1W2PPM0 123 aa6.05□□□□□ -1.44
TDP1-208ENST00000553989 KLLNB2CW77 178 aa6.05□□□□□ -1.44
TDP1-208ENST00000553989 INAFM2P0DMQ5 153 aa6.05□□□□□ -1.44
TDP1-208ENST00000553989 RBX1P62877 108 aa6.05□□□□□ -1.44
TDP1-208ENST00000553989 CEND1Q8N111 149 aa6.05□□□□□ -1.44
TDP1-208ENST00000553989 C11orf72Q8NBR9 251 aa6.05□□□□□ -1.44
TDP1-208ENST00000553989 SYT8Q8NBV8 401 aa6.05□□□□□ -1.44
TDP1-208ENST00000553989 MRPL35Q9NZE8 188 aaKnown RBP6.05□□□□□ -1.44
TDP1-208ENST00000553989 TRBV25-1A0A075B6N4 114 aa6.04□□□□□ -1.44
TDP1-208ENST00000553989 H3BUT2 72 aa6.04□□□□□ -1.44
TDP1-208ENST00000553989 GAS8-AS1O95177 125 aa6.04□□□□□ -1.44
TDP1-208ENST00000553989 Q6ZRN7 208 aaPredicted RBP6.04□□□□□ -1.44
TDP1-208ENST00000553989 NFE4Q86UQ8 179 aa6.04□□□□□ -1.44
TDP1-208ENST00000553989 C14orf178Q8N769 122 aaPredicted RBP6.04□□□□□ -1.44
TDP1-208ENST00000553989 NEXN-AS1Q8NBZ9 246 aa6.04□□□□□ -1.44
TDP1-208ENST00000553989 RASL10AQ92737 203 aa6.04□□□□□ -1.44
TDP1-208ENST00000553989 CHAC1Q9BUX1 264 aa6.04□□□□□ -1.44
TDP1-208ENST00000553989 MRPL16Q9NX20 251 aaKnown RBP6.04□□□□□ -1.44
TDP1-208ENST00000553989 TRGV4A0A0C4DH28 118 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 TRBV6-5A0A0K0K1A5 114 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 MYMXA0A1B0GTQ4 84 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 GNRH2O43555 120 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 DNAH10OSP0CZ25 163 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 GYPEP15421 78 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 GCSHP23434 173 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 HERVK_113P61574 105 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 MRPL23Q16540 153 aaKnown RBP6.03□□□□□ -1.44
TDP1-208ENST00000553989 Q5VSD8 79 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 KIR2DL4Q99706 377 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 PRO0255Q9UI72 69 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 CYSLTR1Q9Y271 337 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 TNFRSF18Q9Y5U5 241 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 SPCS1Q9Y6A9 102 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 KIF25-AS1Q9Y6Z4 181 aa6.03□□□□□ -1.44
TDP1-208ENST00000553989 DNAH5Q8TE73 4624 aa6.02□□□□□ -1.45
TDP1-208ENST00000553989 IGHV1OR15-1A0A075B7D0 117 aa6.02□□□□□ -1.45
TDP1-208ENST00000553989 E9PLD3 99 aa6.02□□□□□ -1.45
TDP1-208ENST00000553989 F8W1H4 67 aa6.02□□□□□ -1.45
TDP1-208ENST00000553989 RNASE3P12724 160 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms