RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 RNF151Q2KHN1 245 aa5.3□□□□□ -1.56
PRKCH-208ENST00000553846 RNASEKQ6P5S7 137 aaKnown RBP5.3□□□□□ -1.56
PRKCH-208ENST00000553846 ISOC2Q96AB3 205 aa5.3□□□□□ -1.56
PRKCH-208ENST00000553846 RPL39LQ96EH5 51 aaKnown RBP5.3□□□□□ -1.56
PRKCH-208ENST00000553846 CDC42SE2Q9NRR3 84 aa5.3□□□□□ -1.56
PRKCH-208ENST00000553846 APCSP02743 223 aa5.29□□□□□ -1.56
PRKCH-208ENST00000553846 EIF5AP63241 154 aaKnown RBP5.29□□□□□ -1.56
PRKCH-208ENST00000553846 RPL18AQ02543 176 aaKnown RBP5.29□□□□□ -1.56
PRKCH-208ENST00000553846 MRPL52Q86TS9 123 aaKnown RBP5.29□□□□□ -1.56
PRKCH-208ENST00000553846 OPRPNQ99935 248 aaPredicted RBP5.29□□□□□ -1.56
PRKCH-208ENST00000553846 PFDN1O60925 122 aa5.28□□□□□ -1.56
PRKCH-208ENST00000553846 TSHBP01222 138 aa5.28□□□□□ -1.56
PRKCH-208ENST00000553846 TRGC1P0CF51 173 aa5.28□□□□□ -1.56
PRKCH-208ENST00000553846 FAM213BQ8TBF2 198 aa5.28□□□□□ -1.56
PRKCH-208ENST00000553846 CAMK2N2Q96S95 79 aa5.28□□□□□ -1.56
PRKCH-208ENST00000553846 TPPP3Q9BW30 176 aa5.28□□□□□ -1.56
PRKCH-208ENST00000553846 KRTAP4-1Q9BYQ7 146 aa5.28□□□□□ -1.56
PRKCH-208ENST00000553846 SDHAF1A6NFY7 115 aa5.27□□□□□ -1.57
PRKCH-208ENST00000553846 F2Z2F3 143 aa5.27□□□□□ -1.57
PRKCH-208ENST00000553846 G3V3Q6 166 aa5.27□□□□□ -1.57
PRKCH-208ENST00000553846 SMLR1H3BR10 107 aa5.27□□□□□ -1.57
PRKCH-208ENST00000553846 H2AFB1P0C5Y9 115 aa5.27□□□□□ -1.57
PRKCH-208ENST00000553846 TLX1NBP0CAT3 122 aa5.27□□□□□ -1.57
PRKCH-208ENST00000553846 RPL35P42766 123 aaKnown RBP5.27□□□□□ -1.57
PRKCH-208ENST00000553846 LYZL1Q6UWQ5 148 aa5.27□□□□□ -1.57
PRKCH-208ENST00000553846 C9orf62Q8N4C0 152 aa5.27□□□□□ -1.57
PRKCH-208ENST00000553846 OR2D3Q8NGH3 330 aa5.27□□□□□ -1.57
PRKCH-208ENST00000553846 TSKUQ8WUA8 353 aa5.27□□□□□ -1.57
PRKCH-208ENST00000553846 SFT2D1Q8WV19 159 aa5.27□□□□□ -1.57
PRKCH-208ENST00000553846 C11orf52Q96A22 123 aa5.27□□□□□ -1.57
PRKCH-208ENST00000553846 CYTL1Q9NRR1 136 aa5.27□□□□□ -1.57
PRKCH-208ENST00000553846 MRPL35Q9NZE8 188 aaKnown RBP5.27□□□□□ -1.57
PRKCH-208ENST00000553846 TRBV6-5A0A0K0K1A5 114 aa5.26□□□□□ -1.57
PRKCH-208ENST00000553846 COX7A2LO14548 114 aa5.26□□□□□ -1.57
PRKCH-208ENST00000553846 RPS20P60866 119 aaKnown RBP5.26□□□□□ -1.57
PRKCH-208ENST00000553846 SS18Q15532 418 aa5.26□□□□□ -1.57
PRKCH-208ENST00000553846 EIF5AL1Q6IS14 154 aaKnown RBP5.26□□□□□ -1.57
PRKCH-208ENST00000553846 TMUB2Q71RG4 321 aa5.26□□□□□ -1.57
PRKCH-208ENST00000553846 FAM19A5Q7Z5A7 132 aaPredicted RBP5.26□□□□□ -1.57
PRKCH-208ENST00000553846 MBD3L1Q8WWY6 194 aa5.26□□□□□ -1.57
PRKCH-208ENST00000553846 RETNLBQ9BQ08 111 aa5.26□□□□□ -1.57
PRKCH-208ENST00000553846 TRBV20OR9-2A0A075B6H5 130 aa5.25□□□□□ -1.57
PRKCH-208ENST00000553846 ZNF861PO60384 105 aa5.25□□□□□ -1.57
PRKCH-208ENST00000553846 FOXA3P55318 350 aaPredicted RBP5.25□□□□□ -1.57
PRKCH-208ENST00000553846 KRTAP13-2Q52LG2 175 aa5.25□□□□□ -1.57
PRKCH-208ENST00000553846 CENPWQ5EE01 88 aa5.25□□□□□ -1.57
PRKCH-208ENST00000553846 C10orf25Q5T742 122 aa5.25□□□□□ -1.57
PRKCH-208ENST00000553846 KCNRGQ8N5I3 272 aa5.25□□□□□ -1.57
PRKCH-208ENST00000553846 RNASE7Q9H1E1 156 aaKnown RBP5.25□□□□□ -1.57
PRKCH-208ENST00000553846 M0QXV9 152 aa5.24□□□□□ -1.57
PRKCH-208ENST00000553846 SPAG11BQ08648 103 aa5.24□□□□□ -1.57
PRKCH-208ENST00000553846 TMEM101Q96IK0 257 aa5.24□□□□□ -1.57
PRKCH-208ENST00000553846 CDIP1Q9H305 208 aa5.24□□□□□ -1.57
PRKCH-208ENST00000553846 SMDT1Q9H4I9 107 aa5.24□□□□□ -1.57
PRKCH-208ENST00000553846 C6orf48Q9UBA6 75 aa5.24□□□□□ -1.57
PRKCH-208ENST00000553846 C1orf196B1AJZ1 125 aa5.23□□□□□ -1.57
PRKCH-208ENST00000553846 UMAD1C9J7I0 102 aa5.23□□□□□ -1.57
PRKCH-208ENST00000553846 I3L3M4 83 aa5.23□□□□□ -1.57
PRKCH-208ENST00000553846 MALP21145 153 aa5.23□□□□□ -1.57
PRKCH-208ENST00000553846 C5orf38Q86SI9 138 aa5.23□□□□□ -1.57
PRKCH-208ENST00000553846 OR10D4PQ8NGN7 298 aa5.23□□□□□ -1.57
PRKCH-208ENST00000553846 FAM104AQ969W3 186 aa5.23□□□□□ -1.57
PRKCH-208ENST00000553846 SMIM12Q96EX1 92 aa5.23□□□□□ -1.57
PRKCH-208ENST00000553846 MRAP2Q96G30 205 aa5.23□□□□□ -1.57
PRKCH-208ENST00000553846 BTF3L4Q96K17 158 aa5.23□□□□□ -1.57
PRKCH-208ENST00000553846 BATF3Q9NR55 127 aa5.23□□□□□ -1.57
PRKCH-208ENST00000553846 TMEM242Q9NWH2 141 aa5.23□□□□□ -1.57
PRKCH-208ENST00000553846 GNG13Q9P2W3 67 aa5.23□□□□□ -1.57
PRKCH-208ENST00000553846 CSDC2Q9Y534 153 aaKnown RBP5.23□□□□□ -1.57
PRKCH-208ENST00000553846 TRBV27A0A0K0K1C4 114 aa5.22□□□□□ -1.57
PRKCH-208ENST00000553846 KANTRA0A1W2PQU2 76 aa5.22□□□□□ -1.57
PRKCH-208ENST00000553846 IFNA1P01562 189 aa5.22□□□□□ -1.57
PRKCH-208ENST00000553846 POLR2KP53803 58 aaKnown RBP5.22□□□□□ -1.57
PRKCH-208ENST00000553846 LINC01547P58512 204 aaPredicted RBP5.22□□□□□ -1.57
PRKCH-208ENST00000553846 SRSF3P84103 164 aaKnown RBP5.22□□□□□ -1.57
PRKCH-208ENST00000553846 KRTAP19-2Q3LHN2 52 aa5.22□□□□□ -1.57
PRKCH-208ENST00000553846 C9orf129Q5T035 196 aaKnown RBP5.22□□□□□ -1.57
PRKCH-208ENST00000553846 LINC00242Q5T6M2 205 aa5.22□□□□□ -1.57
PRKCH-208ENST00000553846 FAM210AQ96ND0 272 aa5.22□□□□□ -1.57
PRKCH-208ENST00000553846 IGLV7-46A0A075B6I9 117 aa5.21□□□□□ -1.58
PRKCH-208ENST00000553846 IGHV3OR16-9A0A0B4J2B5 98 aa5.21□□□□□ -1.58
PRKCH-208ENST00000553846 F8WDY8 70 aa5.21□□□□□ -1.58
PRKCH-208ENST00000553846 CCL20P78556 96 aa5.21□□□□□ -1.58
PRKCH-208ENST00000553846 RGS21Q2M5E4 152 aa5.21□□□□□ -1.58
PRKCH-208ENST00000553846 ASB16-AS1Q495Z4 193 aa5.21□□□□□ -1.58
PRKCH-208ENST00000553846 RNASE13Q5GAN3 156 aaKnown RBP5.21□□□□□ -1.58
PRKCH-208ENST00000553846 UNQ6190/PRO20217Q6UXQ8 127 aa5.21□□□□□ -1.58
PRKCH-208ENST00000553846 TYMSOSQ8TAI1 123 aa5.21□□□□□ -1.58
PRKCH-208ENST00000553846 IMMP2LQ96T52 175 aa5.21□□□□□ -1.58
PRKCH-208ENST00000553846 UBE2D4Q9Y2X8 147 aa5.21□□□□□ -1.58
PRKCH-208ENST00000553846 XKRY2A2RUG3 117 aa5.2□□□□□ -1.58
PRKCH-208ENST00000553846 C7orf77A4D0Y5 90 aa5.2□□□□□ -1.58
PRKCH-208ENST00000553846 RAB19A4D1S5 217 aa5.2□□□□□ -1.58
PRKCH-208ENST00000553846 CRYGAP11844 174 aa5.2□□□□□ -1.58
PRKCH-208ENST00000553846 PMCHP20382 165 aa5.2□□□□□ -1.58
PRKCH-208ENST00000553846 GNG4P50150 75 aa5.2□□□□□ -1.58
PRKCH-208ENST00000553846 UBE2BP63146 152 aa5.2□□□□□ -1.58
PRKCH-208ENST00000553846 ZNF345Q14585 488 aa5.2□□□□□ -1.58
PRKCH-208ENST00000553846 KIAA0087Q14695 138 aa5.2□□□□□ -1.58
PRKCH-208ENST00000553846 TWIST1Q15672 202 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms