RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 TRAV22A0A0B4J277 110 aa-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 EFCAB10A6NFE3 127 aa-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 UQCR11O14957 56 aa-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 SSSCA1O60232 199 aa-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 IFITM1P13164 125 aa-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 TPPP2P59282 170 aa-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 CATR1Q13166 79 aa-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 C5orf38Q86SI9 138 aa-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 PP6455Q8WZ26 134 aa-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 LINC00472Q9H8W2 130 aa-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 DYNLRB1Q9NP97 96 aa-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 LPAP08519 4548 aa-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 MYCBP2O75592 4640 aa-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 ROCK2O75116 1388 aaKnown RBP-0.07□□□□□ -2.42
LINC00648-201ENST00000553747 CELSR1Q9NYQ6 3014 aa-0.08□□□□□ -2.42
LINC00648-201ENST00000553747 C10orf142B7Z368 130 aa-0.08□□□□□ -2.42
LINC00648-201ENST00000553747 I3L2K1 104 aa-0.08□□□□□ -2.42
LINC00648-201ENST00000553747 TNFP01375 233 aa-0.08□□□□□ -2.42
LINC00648-201ENST00000553747 HAMPP81172 84 aa-0.08□□□□□ -2.42
LINC00648-201ENST00000553747 RPL13AP3Q6NVV1 102 aa-0.08□□□□□ -2.42
LINC00648-201ENST00000553747 BAGE2Q86Y30 109 aa-0.08□□□□□ -2.42
LINC00648-201ENST00000553747 Q8IZM0 81 aa-0.08□□□□□ -2.42
LINC00648-201ENST00000553747 MYH9P35579 1960 aaKnown RBP-0.08□□□□□ -2.42
LINC00648-201ENST00000553747 AHCTF1Q8WYP5 2266 aa-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 LOC285095A0A1B0GVY8 99 aa-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 F8VRH5 84 aa-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 HMGN4O00479 90 aa-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 BCE1O60756 84 aa-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 CFDP00746 253 aaPredicted RBP-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 IFNGP01579 166 aa-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 APOC3P02656 99 aa-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 S100A3P33764 101 aa-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 ATP5EP56381 51 aaPredicted RBP-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 TMEM170BQ5T4T1 132 aa-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 TP53AIP1Q9HCN2 124 aa-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 UBR5O95071 2799 aaPredicted RBP-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 TENM4Q6N022 2769 aa-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 EHBP1L1Q8N3D4 1523 aa-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 FAM135AQ9P2D6 1515 aa-0.09□□□□□ -2.42
LINC00648-201ENST00000553747 WDR7Q9Y4E6 1490 aa-0.1□□□□□ -2.42
LINC00648-201ENST00000553747 C10orf71Q711Q0 1435 aa-0.1□□□□□ -2.43
LINC00648-201ENST00000553747 SCN7AQ01118 1682 aa-0.1□□□□□ -2.43
LINC00648-201ENST00000553747 OOSP1A8MZH6 123 aa-0.1□□□□□ -2.43
LINC00648-201ENST00000553747 AKAIN1P0CW23 69 aa-0.1□□□□□ -2.43
LINC00648-201ENST00000553747 SARNPP82979 210 aaKnown RBP-0.1□□□□□ -2.43
LINC00648-201ENST00000553747 TSLPQ969D9 159 aa-0.1□□□□□ -2.43
LINC00648-201ENST00000553747 LINC01558Q9Y6Z2 57 aa-0.1□□□□□ -2.43
LINC00648-201ENST00000553747 MAPKBP1O60336 1514 aa-0.1□□□□□ -2.43
LINC00648-201ENST00000553747 ARHGEF12Q9NZN5 1544 aa-0.1□□□□□ -2.43
LINC00648-201ENST00000553747 MRC2Q9UBG0 1479 aa-0.1□□□□□ -2.43
LINC00648-201ENST00000553747 SHANK2Q9UPX8 1470 aa-0.1□□□□□ -2.43
LINC00648-201ENST00000553747 HMGXB3Q12766 1538 aa-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 TOP2BQ02880 1626 aa-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 UBE2L5PA0A1B0GUS4 154 aa-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 IGLC7A0M8Q6 106 aa-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 DLEU1O43261 78 aa-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 UBE2L3P68036 154 aaKnown RBP-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 DEFB109BQ30KR1 87 aa-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 C9orf153Q5TBE3 101 aa-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 Q6JHZ5 121 aa-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 MRPL54Q6P161 138 aaKnown RBP-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 MYOZ3Q8TDC0 251 aa-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 DOCK11Q5JSL3 2073 aa-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 SPHKAPQ2M3C7 1700 aa-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 KDM5AP29375 1690 aaKnown RBP-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 TOPAZ1Q8N9V7 1692 aa-0.11□□□□□ -2.43
LINC00648-201ENST00000553747 CACNA1AO00555 2505 aa-0.12□□□□□ -2.43
LINC00648-201ENST00000553747 TULP4Q9NRJ4 1543 aa-0.12□□□□□ -2.43
LINC00648-201ENST00000553747 PSME4Q14997 1843 aa-0.12□□□□□ -2.43
LINC00648-201ENST00000553747 SFT2D2O95562 160 aa-0.12□□□□□ -2.43
LINC00648-201ENST00000553747 DCDP81605 110 aaKnown RBP-0.12□□□□□ -2.43
LINC00648-201ENST00000553747 CDC42SE2Q9NRR3 84 aa-0.12□□□□□ -2.43
LINC00648-201ENST00000553747 FAM208BQ5VWN6 2430 aa-0.12□□□□□ -2.43
LINC00648-201ENST00000553747 HSPG2P98160 4391 aa-0.12□□□□□ -2.43
LINC00648-201ENST00000553747 NSD3Q9BZ95 1437 aa-0.13□□□□□ -2.43
LINC00648-201ENST00000553747 ARHGAP5Q13017 1502 aa-0.13□□□□□ -2.43
LINC00648-201ENST00000553747 CC2D2AQ9P2K1 1620 aa-0.13□□□□□ -2.43
LINC00648-201ENST00000553747 CHD1O14646 1710 aa-0.13□□□□□ -2.43
LINC00648-201ENST00000553747 NUP188Q5SRE5 1749 aa-0.13□□□□□ -2.43
LINC00648-201ENST00000553747 MAGI1Q96QZ7 1491 aaPredicted RBP-0.13□□□□□ -2.43
LINC00648-201ENST00000553747 MGPP08493 103 aa-0.13□□□□□ -2.43
LINC00648-201ENST00000553747 SPRR1AP35321 89 aa-0.13□□□□□ -2.43
LINC00648-201ENST00000553747 GNG4P50150 75 aa-0.13□□□□□ -2.43
LINC00648-201ENST00000553747 FAM167A-AS1Q96KT0 104 aa-0.13□□□□□ -2.43
LINC00648-201ENST00000553747 LINC00474Q9P2X8 69 aa-0.13□□□□□ -2.43
LINC00648-201ENST00000553747 SCAPERQ9BY12 1400 aa-0.13□□□□□ -2.43
LINC00648-201ENST00000553747 PZPP20742 1482 aa-0.14□□□□□ -2.43
LINC00648-201ENST00000553747 FAT2Q9NYQ8 4349 aa-0.14□□□□□ -2.43
LINC00648-201ENST00000553747 TNXBP22105 4242 aa-0.14□□□□□ -2.43
LINC00648-201ENST00000553747 TRBV6-1A0A0K0K1D8 114 aa-0.14□□□□□ -2.43
LINC00648-201ENST00000553747 A0A1B0GV90 55 aa-0.14□□□□□ -2.43
LINC00648-201ENST00000553747 SPRR2DP22532 72 aa-0.14□□□□□ -2.43
LINC00648-201ENST00000553747 PIGYQ3MUY2 71 aa-0.14□□□□□ -2.43
LINC00648-201ENST00000553747 SPRR4Q96PI1 79 aa-0.14□□□□□ -2.43
LINC00648-201ENST00000553747 UQCR10Q9UDW1 63 aa-0.14□□□□□ -2.43
LINC00648-201ENST00000553747 IER3IP1Q9Y5U9 82 aa-0.14□□□□□ -2.43
LINC00648-201ENST00000553747 GAPVD1Q14C86 1478 aa-0.15□□□□□ -2.43
LINC00648-201ENST00000553747 KIAA0556O60303 1618 aa-0.15□□□□□ -2.43
LINC00648-201ENST00000553747 ALMS1Q8TCU4 4167 aa-0.15□□□□□ -2.43
LINC00648-201ENST00000553747 UBE2D3P61077 147 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms