RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 SNAPINO95295 136 aa15.02■□□□□ -0
TDP1-206ENST00000553569 KIAA1644Q3SXP7 199 aa15.01□□□□□ -0.01
TDP1-206ENST00000553569 DGAT2L7PQ6IED9 249 aa15.01□□□□□ -0.01
TDP1-206ENST00000553569 USP17L23D6RBM5 183 aa15□□□□□ -0.01
TDP1-206ENST00000553569 TMEM18Q96B42 140 aa15□□□□□ -0.01
TDP1-206ENST00000553569 UBE2D4Q9Y2X8 147 aa15□□□□□ -0.01
TDP1-206ENST00000553569 DNAH5Q8TE73 4624 aa15□□□□□ -0.01
TDP1-206ENST00000553569 RAB5AP20339 215 aa14.99□□□□□ -0.01
TDP1-206ENST00000553569 GCSHP23434 173 aa14.99□□□□□ -0.01
TDP1-206ENST00000553569 SMAGPQ0VAQ4 97 aa14.99□□□□□ -0.01
TDP1-206ENST00000553569 KRTAP10-1P60331 282 aa14.98□□□□□ -0.01
TDP1-206ENST00000553569 RPL39P62891 51 aaKnown RBP14.98□□□□□ -0.01
TDP1-206ENST00000553569 C14orf177Q52M58 125 aa14.98□□□□□ -0.01
TDP1-206ENST00000553569 GNB1LQ9BYB4 327 aa14.98□□□□□ -0.01
TDP1-206ENST00000553569 CDC42SE2Q9NRR3 84 aa14.98□□□□□ -0.01
TDP1-206ENST00000553569 LRP1BQ9NZR2 4599 aa14.97□□□□□ -0.01
TDP1-206ENST00000553569 GAGE12HA6NDE8 117 aa14.97□□□□□ -0.01
TDP1-206ENST00000553569 SLC7A5P1Q8MH63 180 aa14.97□□□□□ -0.01
TDP1-206ENST00000553569 ZNF664Q8N3J9 261 aa14.97□□□□□ -0.01
TDP1-206ENST00000553569 CHCHD10Q8WYQ3 142 aaPredicted RBP14.97□□□□□ -0.01
TDP1-206ENST00000553569 PRSS47A8MTI9 375 aa14.96□□□□□ -0.01
TDP1-206ENST00000553569 COX19Q49B96 90 aa14.96□□□□□ -0.01
TDP1-206ENST00000553569 RNASE13Q5GAN3 156 aaKnown RBP14.96□□□□□ -0.01
TDP1-206ENST00000553569 KIAA1109Q2LD37 5005 aa14.95□□□□□ -0.02
TDP1-206ENST00000553569 TGIF2-C20orf24A0A0A6YYL0 155 aa14.95□□□□□ -0.02
TDP1-206ENST00000553569 Q6ZUT4 128 aa14.95□□□□□ -0.02
TDP1-206ENST00000553569 Q8N8P6 123 aa14.95□□□□□ -0.02
TDP1-206ENST00000553569 LINC00959A0A1B0GUT2 108 aa14.94□□□□□ -0.02
TDP1-206ENST00000553569 TIMM21Q9BVV7 248 aa14.94□□□□□ -0.02
TDP1-206ENST00000553569 CSDC2Q9Y534 153 aaKnown RBP14.94□□□□□ -0.02
TDP1-206ENST00000553569 CDK2AP2O75956 126 aa14.93□□□□□ -0.02
TDP1-206ENST00000553569 MT-ND6P03923 174 aa14.93□□□□□ -0.02
TDP1-206ENST00000553569 MRPL18Q9H0U6 180 aaKnown RBP14.93□□□□□ -0.02
TDP1-206ENST00000553569 XCL1P47992 114 aa14.92□□□□□ -0.02
TDP1-206ENST00000553569 SPANXA1Q9NS26 97 aa14.92□□□□□ -0.02
TDP1-206ENST00000553569 CCL25O15444 150 aa14.91□□□□□ -0.02
TDP1-206ENST00000553569 PRSS1P07477 247 aa14.91□□□□□ -0.02
TDP1-206ENST00000553569 IFI27P40305 119 aaPredicted RBP14.91□□□□□ -0.02
TDP1-206ENST00000553569 FABP9Q0Z7S8 132 aa14.91□□□□□ -0.02
TDP1-206ENST00000553569 SS18Q15532 418 aa14.91□□□□□ -0.02
TDP1-206ENST00000553569 NXT2Q9NPJ8 142 aaKnown RBP14.91□□□□□ -0.02
TDP1-206ENST00000553569 LINC01620Q4KN68 170 aa14.9□□□□□ -0.02
TDP1-206ENST00000553569 FOXI1Q12951 378 aa14.89□□□□□ -0.03
TDP1-206ENST00000553569 OPRPNQ99935 248 aaPredicted RBP14.89□□□□□ -0.03
TDP1-206ENST00000553569 TRAV13-1A0A0B4J241 112 aa14.88□□□□□ -0.03
TDP1-206ENST00000553569 hDV102S1A0JD36 115 aa14.88□□□□□ -0.03
TDP1-206ENST00000553569 ORMDL2Q53FV1 153 aa14.88□□□□□ -0.03
TDP1-206ENST00000553569 ALKBH7Q9BT30 221 aaPredicted RBP14.88□□□□□ -0.03
TDP1-206ENST00000553569 TRAPPC1Q9Y5R8 145 aa14.87□□□□□ -0.03
TDP1-206ENST00000553569 C15orf56Q8N910 161 aa14.86□□□□□ -0.03
TDP1-206ENST00000553569 CYSLTR1Q9Y271 337 aa14.86□□□□□ -0.03
TDP1-206ENST00000553569 K7EMI3 77 aa14.85□□□□□ -0.03
TDP1-206ENST00000553569 MRPS36P82909 103 aaKnown RBP14.85□□□□□ -0.03
TDP1-206ENST00000553569 C2orf66Q6UXQ4 117 aa14.85□□□□□ -0.03
TDP1-206ENST00000553569 PRSS3P2Q8NHM4 247 aa14.85□□□□□ -0.03
TDP1-206ENST00000553569 FAM104AQ969W3 186 aa14.85□□□□□ -0.03
TDP1-206ENST00000553569 HERC2O95714 4834 aa14.85□□□□□ -0.03
TDP1-206ENST00000553569 C1orf196B1AJZ1 125 aa14.84□□□□□ -0.03
TDP1-206ENST00000553569 HAMPP81172 84 aa14.84□□□□□ -0.03
TDP1-206ENST00000553569 HIGD2BQ4VC39 106 aa14.84□□□□□ -0.03
TDP1-206ENST00000553569 CFAP161Q6P656 301 aa14.84□□□□□ -0.03
TDP1-206ENST00000553569 CD164L2Q6UWJ8 174 aa14.84□□□□□ -0.03
TDP1-206ENST00000553569 CBLN2Q8IUK8 224 aa14.84□□□□□ -0.03
TDP1-206ENST00000553569 APOBP04114 4563 aaKnown RBP14.83□□□□□ -0.04
TDP1-206ENST00000553569 AP5S1Q9NUS5 200 aa14.83□□□□□ -0.04
TDP1-206ENST00000553569 PYGO1Q9Y3Y4 419 aa14.83□□□□□ -0.04
TDP1-206ENST00000553569 RYR1P21817 5038 aa14.83□□□□□ -0.04
TDP1-206ENST00000553569 IGLV4-3A0A075B6K6 122 aa14.82□□□□□ -0.04
TDP1-206ENST00000553569 IFITM10A6NMD0 228 aa14.82□□□□□ -0.04
TDP1-206ENST00000553569 YPEL4Q96NS1 127 aa14.82□□□□□ -0.04
TDP1-206ENST00000553569 FAM30AQ9NZY2 134 aa14.82□□□□□ -0.04
TDP1-206ENST00000553569 XGP55808 180 aa14.81□□□□□ -0.04
TDP1-206ENST00000553569 SMCO4Q9NRQ5 59 aa14.81□□□□□ -0.04
TDP1-206ENST00000553569 TMEM141Q96I45 108 aa14.8□□□□□ -0.04
TDP1-206ENST00000553569 HSPG2P98160 4391 aa14.8□□□□□ -0.04
TDP1-206ENST00000553569 FA2HQ7L5A8 372 aa14.79□□□□□ -0.04
TDP1-206ENST00000553569 IGHV1-58A0A0C4DH39 117 aa14.78□□□□□ -0.04
TDP1-206ENST00000553569 COX7A2LO14548 114 aa14.78□□□□□ -0.04
TDP1-206ENST00000553569 GVQW2A0A096LPI5 108 aaPredicted RBP14.77□□□□□ -0.05
TDP1-206ENST00000553569 SLPIP03973 132 aa14.77□□□□□ -0.05
TDP1-206ENST00000553569 MALP21145 153 aa14.77□□□□□ -0.05
TDP1-206ENST00000553569 CNBPP62633 177 aaKnown RBP14.77□□□□□ -0.05
TDP1-206ENST00000553569 Q6ZN92 141 aa14.77□□□□□ -0.05
TDP1-206ENST00000553569 TEX43Q6ZNM6 134 aa14.77□□□□□ -0.05
TDP1-206ENST00000553569 C5orf38Q86SI9 138 aa14.77□□□□□ -0.05
TDP1-206ENST00000553569 G0S2P27469 103 aa14.76□□□□□ -0.05
TDP1-206ENST00000553569 ZC2HC1BQ5TFG8 222 aa14.76□□□□□ -0.05
TDP1-206ENST00000553569 C9orf163Q8N9P6 203 aa14.76□□□□□ -0.05
TDP1-206ENST00000553569 TOMM6Q96B49 74 aa14.76□□□□□ -0.05
TDP1-206ENST00000553569 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.75□□□□□ -0.05
TDP1-206ENST00000553569 IGIPA6NJ69 53 aa14.75□□□□□ -0.05
TDP1-206ENST00000553569 Q6ZSA8 131 aa14.75□□□□□ -0.05
TDP1-206ENST00000553569 C18orf32Q8TCD1 76 aa14.75□□□□□ -0.05
TDP1-206ENST00000553569 KRTAP17-1Q9BYP8 105 aa14.75□□□□□ -0.05
TDP1-206ENST00000553569 LINC01546A6NGU7 62 aa14.74□□□□□ -0.05
TDP1-206ENST00000553569 LINC00526Q96FQ7 95 aa14.74□□□□□ -0.05
TDP1-206ENST00000553569 C2orf88Q9BSF0 95 aa14.74□□□□□ -0.05
TDP1-206ENST00000553569 VCX2Q9H322 139 aa14.73□□□□□ -0.05
TDP1-206ENST00000553569 LINC00173Q6ZV60 143 aa14.72□□□□□ -0.05
TDP1-206ENST00000553569 SCGB3A1Q96QR1 104 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms