RNA–Protein interactions for RNA: ENST00000553317.1

CCDC175-203, Transcript of coiled-coil domain containing 175, humanhuman

TSL 3

Gene CCDC175, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-203ENST00000553317 PSPHP78330 225 aa-2.03□□□□□ -2.73
CCDC175-203ENST00000553317 SLC35B3Q9H1N7 401 aa-2.03□□□□□ -2.73
CCDC175-203ENST00000553317 UHRF1BP1LA0JNW5 1464 aa-2.04□□□□□ -2.74
CCDC175-203ENST00000553317 LRRC37A2A6NM11 1700 aa-2.04□□□□□ -2.74
CCDC175-203ENST00000553317 SBF2Q86WG5 1849 aa-2.04□□□□□ -2.74
CCDC175-203ENST00000553317 SNX29P2Q8IUI4 249 aa-2.04□□□□□ -2.74
CCDC175-203ENST00000553317 C9orf62Q8N4C0 152 aa-2.04□□□□□ -2.74
CCDC175-203ENST00000553317 NSD3Q9BZ95 1437 aa-2.04□□□□□ -2.74
CCDC175-203ENST00000553317 S4R3F8 94 aa-2.04□□□□□ -2.74
CCDC175-203ENST00000553317 FMN2Q9NZ56 1722 aa-2.05□□□□□ -2.74
CCDC175-203ENST00000553317 GAPVD1Q14C86 1478 aa-2.05□□□□□ -2.74
CCDC175-203ENST00000553317 ANKRD50Q9ULJ7 1429 aa-2.05□□□□□ -2.74
CCDC175-203ENST00000553317 E7EQ34 232 aa-2.05□□□□□ -2.74
CCDC175-203ENST00000553317 IFNGP01579 166 aa-2.05□□□□□ -2.74
CCDC175-203ENST00000553317 H1FX-AS1Q4G0G2 97 aa-2.05□□□□□ -2.74
CCDC175-203ENST00000553317 TMEM78Q5T7P6 136 aa-2.05□□□□□ -2.74
CCDC175-203ENST00000553317 TMEM91Q6ZNR0 172 aa-2.05□□□□□ -2.74
CCDC175-203ENST00000553317 HOPXQ9BPY8 73 aaPredicted RBP-2.05□□□□□ -2.74
CCDC175-203ENST00000553317 BOLA2Q9H3K6 86 aa-2.05□□□□□ -2.74
CCDC175-203ENST00000553317 KDM5CP41229 1560 aa-2.06□□□□□ -2.74
CCDC175-203ENST00000553317 PRUNE2Q8WUY3 3088 aa-2.06□□□□□ -2.74
CCDC175-203ENST00000553317 TCRAP04437 139 aa-2.06□□□□□ -2.74
CCDC175-203ENST00000553317 UBE2D1P51668 147 aa-2.06□□□□□ -2.74
CCDC175-203ENST00000553317 ATP6V0E2Q8NHE4 81 aa-2.06□□□□□ -2.74
CCDC175-203ENST00000553317 THEM6Q8WUY1 208 aa-2.06□□□□□ -2.74
CCDC175-203ENST00000553317 APLNQ9ULZ1 77 aa-2.06□□□□□ -2.74
CCDC175-203ENST00000553317 NOP16Q9Y3C1 178 aaKnown RBP-2.06□□□□□ -2.74
CCDC175-203ENST00000553317 MED23Q9ULK4 1368 aa-2.07□□□□□ -2.74
CCDC175-203ENST00000553317 C9orf92A6NGG3 77 aa-2.07□□□□□ -2.74
CCDC175-203ENST00000553317 POLR2HP52434 150 aaKnown RBP-2.07□□□□□ -2.74
CCDC175-203ENST00000553317 LRRC37A3O60309 1634 aa-2.07□□□□□ -2.74
CCDC175-203ENST00000553317 CDC42BPGQ6DT37 1551 aa-2.07□□□□□ -2.74
CCDC175-203ENST00000553317 A0A1W2PRE2 83 aa-2.08□□□□□ -2.74
CCDC175-203ENST00000553317 COX8AP10176 69 aa-2.08□□□□□ -2.74
CCDC175-203ENST00000553317 DEFB110Q30KQ9 67 aa-2.08□□□□□ -2.74
CCDC175-203ENST00000553317 SMIM4Q8WVI0 70 aa-2.08□□□□□ -2.74
CCDC175-203ENST00000553317 C10orf82Q8WW14 230 aa-2.08□□□□□ -2.74
CCDC175-203ENST00000553317 DNAJC15Q9Y5T4 150 aa-2.08□□□□□ -2.74
CCDC175-203ENST00000553317 CSMD2Q7Z408 3487 aa-2.08□□□□□ -2.74
CCDC175-203ENST00000553317 FREM2Q5SZK8 3169 aa-2.08□□□□□ -2.74
CCDC175-203ENST00000553317 GOLGA4Q13439 2230 aaKnown RBP-2.09□□□□□ -2.74
CCDC175-203ENST00000553317 C9orf116Q5BN46 136 aaPredicted RBP-2.09□□□□□ -2.74
CCDC175-203ENST00000553317 SELENOSQ9BQE4 189 aa-2.09□□□□□ -2.74
CCDC175-203ENST00000553317 ZNF236Q9UL36 1845 aa-2.1□□□□□ -2.74
CCDC175-203ENST00000553317 MGAQ8IWI9 3026 aa-2.1□□□□□ -2.75
CCDC175-203ENST00000553317 J3QLW9 94 aa-2.1□□□□□ -2.75
CCDC175-203ENST00000553317 CCL18P55774 89 aa-2.1□□□□□ -2.75
CCDC175-203ENST00000553317 TRIQKQ629K1 86 aa-2.1□□□□□ -2.75
CCDC175-203ENST00000553317 Q6JHZ5 121 aa-2.1□□□□□ -2.75
CCDC175-203ENST00000553317 ATP11AUNQ6ZP68 121 aa-2.1□□□□□ -2.75
CCDC175-203ENST00000553317 GID8Q9NWU2 228 aa-2.1□□□□□ -2.75
CCDC175-203ENST00000553317 PRDM2Q13029 1718 aa-2.11□□□□□ -2.75
CCDC175-203ENST00000553317 MAP3K1Q13233 1512 aa-2.11□□□□□ -2.75
CCDC175-203ENST00000553317 MAGI1Q96QZ7 1491 aaPredicted RBP-2.11□□□□□ -2.75
CCDC175-203ENST00000553317 NDUFA12Q9UI09 145 aa-2.11□□□□□ -2.75
CCDC175-203ENST00000553317 PAPPA2Q9BXP8 1791 aa-2.11□□□□□ -2.75
CCDC175-203ENST00000553317 BORCS7-ASMTA0A0B4J1R7 106 aa-2.12□□□□□ -2.75
CCDC175-203ENST00000553317 PITX3O75364 302 aa-2.12□□□□□ -2.75
CCDC175-203ENST00000553317 BCORQ6W2J9 1755 aa-2.13□□□□□ -2.75
CCDC175-203ENST00000553317 CTXND1A0A1B0GTU2 59 aa-2.13□□□□□ -2.75
CCDC175-203ENST00000553317 RPL7P18124 248 aaKnown RBP-2.13□□□□□ -2.75
CCDC175-203ENST00000553317 LINC01545Q5VT33 79 aa-2.13□□□□□ -2.75
CCDC175-203ENST00000553317 CCDC115Q96NT0 180 aa-2.13□□□□□ -2.75
CCDC175-203ENST00000553317 AMELXQ99217 191 aa-2.13□□□□□ -2.75
CCDC175-203ENST00000553317 POLA1P09884 1462 aaPredicted RBP-2.14□□□□□ -2.75
CCDC175-203ENST00000553317 MRC1P22897 1456 aa-2.14□□□□□ -2.75
CCDC175-203ENST00000553317 CPSF4LA6NMK7 179 aaKnown RBP-2.14□□□□□ -2.75
CCDC175-203ENST00000553317 M0R135 149 aa-2.14□□□□□ -2.75
CCDC175-203ENST00000553317 RBP4P02753 201 aa-2.14□□□□□ -2.75
CCDC175-203ENST00000553317 PIRTP0C851 137 aa-2.14□□□□□ -2.75
CCDC175-203ENST00000553317 TMEM170BQ5T4T1 132 aa-2.14□□□□□ -2.75
CCDC175-203ENST00000553317 MNS1Q8NEH6 495 aa-2.14□□□□□ -2.75
CCDC175-203ENST00000553317 VSTM2AQ8TAG5 236 aa-2.14□□□□□ -2.75
CCDC175-203ENST00000553317 NAA60Q9H7X0 242 aa-2.14□□□□□ -2.75
CCDC175-203ENST00000553317 RPRMQ9NS64 109 aa-2.14□□□□□ -2.75
CCDC175-203ENST00000553317 ATPIF1Q9UII2 106 aa-2.14□□□□□ -2.75
CCDC175-203ENST00000553317 ROCK1Q13464 1354 aa-2.14□□□□□ -2.75
CCDC175-203ENST00000553317 DMDP11532 3685 aa-2.15□□□□□ -2.75
CCDC175-203ENST00000553317 HMGXB3Q12766 1538 aa-2.15□□□□□ -2.75
CCDC175-203ENST00000553317 HLA-DRB4P13762 266 aa-2.15□□□□□ -2.75
CCDC175-203ENST00000553317 COX17Q14061 63 aa-2.15□□□□□ -2.75
CCDC175-203ENST00000553317 HLA-DRB4X5D2U9 266 aa-2.15□□□□□ -2.75
CCDC175-203ENST00000553317 KIAA0556O60303 1618 aa-2.16□□□□□ -2.75
CCDC175-203ENST00000553317 YPEL1O60688 119 aa-2.16□□□□□ -2.76
CCDC175-203ENST00000553317 CLLU1Q5K131 121 aa-2.16□□□□□ -2.76
CCDC175-203ENST00000553317 ZNF818PQ6ZRF7 136 aa-2.16□□□□□ -2.76
CCDC175-203ENST00000553317 USMG5Q96IX5 58 aa-2.16□□□□□ -2.76
CCDC175-203ENST00000553317 R4GMQ9 66 aa-2.16□□□□□ -2.76
CCDC175-203ENST00000553317 SMG6Q86US8 1419 aaKnown RBP-2.17□□□□□ -2.76
CCDC175-203ENST00000553317 TULP4Q9NRJ4 1543 aa-2.17□□□□□ -2.76
CCDC175-203ENST00000553317 ERCC6Q03468 1493 aa-2.17□□□□□ -2.76
CCDC175-203ENST00000553317 PXDNQ92626 1479 aa-2.17□□□□□ -2.76
CCDC175-203ENST00000553317 IFNA17P01571 189 aa-2.17□□□□□ -2.76
CCDC175-203ENST00000553317 PIPP12273 146 aaPredicted RBP-2.17□□□□□ -2.76
CCDC175-203ENST00000553317 ALX1Q15699 326 aa-2.17□□□□□ -2.76
CCDC175-203ENST00000553317 RPL7L1Q6DKI1 246 aaKnown RBP-2.17□□□□□ -2.76
CCDC175-203ENST00000553317 CALML5Q9NZT1 146 aa-2.17□□□□□ -2.76
CCDC175-203ENST00000553317 LSM2Q9Y333 95 aaKnown RBP-2.17□□□□□ -2.76
CCDC175-203ENST00000553317 LINC00312Q9Y6C7 94 aa-2.17□□□□□ -2.76
CCDC175-203ENST00000553317 MYH8P13535 1937 aa-2.17□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms