RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 POLR2KP53803 58 aaKnown RBP8.54□□□□□ -1.04
SYNE2-208ENST00000553289 MUC7Q8TAX7 377 aa8.54□□□□□ -1.04
SYNE2-208ENST00000553289 TRAV23DV6A0A075B6W5 121 aa8.53□□□□□ -1.04
SYNE2-208ENST00000553289 CD164L2Q6UWJ8 174 aa8.53□□□□□ -1.04
SYNE2-208ENST00000553289 HIGD2AQ9BW72 106 aa8.53□□□□□ -1.04
SYNE2-208ENST00000553289 IGKV2-24A0A0C4DH68 120 aa8.53□□□□□ -1.04
SYNE2-208ENST00000553289 PCNX3Q9H6A9 2034 aa8.52□□□□□ -1.05
SYNE2-208ENST00000553289 MT-ATP8P03928 68 aa8.52□□□□□ -1.05
SYNE2-208ENST00000553289 SYCNQ0VAF6 134 aa8.52□□□□□ -1.05
SYNE2-208ENST00000553289 RBX1P62877 108 aa8.52□□□□□ -1.05
SYNE2-208ENST00000553289 UBE2D4Q9Y2X8 147 aa8.52□□□□□ -1.05
SYNE2-208ENST00000553289 C11orf21Q9P2W6 132 aa8.51□□□□□ -1.05
SYNE2-208ENST00000553289 SPG11Q96JI7 2443 aa8.51□□□□□ -1.05
SYNE2-208ENST00000553289 C2orf91Q6ZV80 131 aa8.51□□□□□ -1.05
SYNE2-208ENST00000553289 IMUPQ9GZP8 106 aa8.51□□□□□ -1.05
SYNE2-208ENST00000553289 FAM19A1Q7Z5A9 133 aa8.51□□□□□ -1.05
SYNE2-208ENST00000553289 PRR9Q5T870 116 aa8.51□□□□□ -1.05
SYNE2-208ENST00000553289 DCANP1Q8TF63 244 aa8.51□□□□□ -1.05
SYNE2-208ENST00000553289 C10orf99Q6UWK7 81 aa8.5□□□□□ -1.05
SYNE2-208ENST00000553289 PROK1P58294 105 aa8.5□□□□□ -1.05
SYNE2-208ENST00000553289 RNF183Q96D59 192 aa8.5□□□□□ -1.05
SYNE2-208ENST00000553289 DSCAMO60469 2012 aa8.5□□□□□ -1.05
SYNE2-208ENST00000553289 BDP1A6H8Y1 2624 aa8.5□□□□□ -1.05
SYNE2-208ENST00000553289 TRAV10A0A0B4J240 114 aa8.5□□□□□ -1.05
SYNE2-208ENST00000553289 C6orf99Q4VX62 202 aa8.5□□□□□ -1.05
SYNE2-208ENST00000553289 SDIM1Q6ZPB5 146 aa8.5□□□□□ -1.05
SYNE2-208ENST00000553289 COX17Q14061 63 aa8.5□□□□□ -1.05
SYNE2-208ENST00000553289 LELP1Q5T871 98 aa8.5□□□□□ -1.05
SYNE2-208ENST00000553289 LST1O00453 97 aa8.49□□□□□ -1.05
SYNE2-208ENST00000553289 SEC61GP60059 68 aa8.49□□□□□ -1.05
SYNE2-208ENST00000553289 INAFM1C9JVW0 142 aa8.49□□□□□ -1.05
SYNE2-208ENST00000553289 UBE2D1P51668 147 aa8.49□□□□□ -1.05
SYNE2-208ENST00000553289 Q8N976 141 aa8.49□□□□□ -1.05
SYNE2-208ENST00000553289 LINC01006Q8NI28 216 aa8.49□□□□□ -1.05
SYNE2-208ENST00000553289 BBC3Q96PG8 261 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-208ENST00000553289 KIAA1549Q9HCM3 1950 aa8.48□□□□□ -1.05
SYNE2-208ENST00000553289 C20orf197Q8N268 126 aa8.48□□□□□ -1.05
SYNE2-208ENST00000553289 ZNF843Q8N446 348 aa8.48□□□□□ -1.05
SYNE2-208ENST00000553289 C3orf22Q8N5N4 141 aa8.48□□□□□ -1.05
SYNE2-208ENST00000553289 M0R378 163 aa8.48□□□□□ -1.05
SYNE2-208ENST00000553289 DHRS4-AS1Q9P1J3 65 aa8.48□□□□□ -1.05
SYNE2-208ENST00000553289 LINC00959A0A1B0GUT2 108 aa8.47□□□□□ -1.05
SYNE2-208ENST00000553289 SLPIP03973 132 aa8.47□□□□□ -1.05
SYNE2-208ENST00000553289 CRIP2P52943 208 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-208ENST00000553289 LINC00482Q8N8I6 264 aa8.47□□□□□ -1.05
SYNE2-208ENST00000553289 FAM236DA0A1B0GTK5 79 aa8.47□□□□□ -1.05
SYNE2-208ENST00000553289 IGKV4-1P06312 121 aa8.47□□□□□ -1.05
SYNE2-208ENST00000553289 FAM236CP0DP71 79 aa8.47□□□□□ -1.05
SYNE2-208ENST00000553289 ENHOQ6UWT2 76 aa8.47□□□□□ -1.05
SYNE2-208ENST00000553289 XAGE1AQ9HD64 81 aa8.47□□□□□ -1.05
SYNE2-208ENST00000553289 MRPS12O15235 138 aaKnown RBP8.46□□□□□ -1.05
SYNE2-208ENST00000553289 PRB2P02812 416 aaPredicted RBP8.46□□□□□ -1.05
SYNE2-208ENST00000553289 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.06
SYNE2-208ENST00000553289 A0A087WZ39 114 aa8.46□□□□□ -1.06
SYNE2-208ENST00000553289 ATP5EP56381 51 aaPredicted RBP8.46□□□□□ -1.06
SYNE2-208ENST00000553289 UBE2D3P61077 147 aa8.46□□□□□ -1.06
SYNE2-208ENST00000553289 UBE2D2P62837 147 aa8.46□□□□□ -1.06
SYNE2-208ENST00000553289 NDUFC1O43677 76 aa8.46□□□□□ -1.06
SYNE2-208ENST00000553289 CEP192Q8TEP8 1941 aa8.46□□□□□ -1.06
SYNE2-208ENST00000553289 BRI3O95415 125 aa8.45□□□□□ -1.06
SYNE2-208ENST00000553289 Q8IZM0 81 aa8.45□□□□□ -1.06
SYNE2-208ENST00000553289 CCKP06307 115 aa8.45□□□□□ -1.06
SYNE2-208ENST00000553289 WNK1Q9H4A3 2382 aa8.45□□□□□ -1.06
SYNE2-208ENST00000553289 IGIPA6NJ69 53 aa8.45□□□□□ -1.06
SYNE2-208ENST00000553289 PRR14LQ5THK1 2151 aa8.45□□□□□ -1.06
SYNE2-208ENST00000553289 CUL9Q8IWT3 2517 aa8.45□□□□□ -1.06
SYNE2-208ENST00000553289 USP17L23D6RBM5 183 aa8.44□□□□□ -1.06
SYNE2-208ENST00000553289 FAM19A5Q7Z5A7 132 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-208ENST00000553289 DSCAML1Q8TD84 2053 aa8.44□□□□□ -1.06
SYNE2-208ENST00000553289 CSPG4Q6UVK1 2322 aa8.44□□□□□ -1.06
SYNE2-208ENST00000553289 COX8CQ7Z4L0 72 aa8.44□□□□□ -1.06
SYNE2-208ENST00000553289 CDC42SE2Q9NRR3 84 aa8.44□□□□□ -1.06
SYNE2-208ENST00000553289 ZNF580Q9UK33 172 aa8.44□□□□□ -1.06
SYNE2-208ENST00000553289 KPRPQ5T749 579 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-208ENST00000553289 LY6G6DO95868 133 aa8.43□□□□□ -1.06
SYNE2-208ENST00000553289 ZNF706Q9Y5V0 76 aaPredicted RBP8.43□□□□□ -1.06
SYNE2-208ENST00000553289 ATG2AQ2TAZ0 1938 aa8.43□□□□□ -1.06
SYNE2-208ENST00000553289 HCFC1P51610 2035 aa8.43□□□□□ -1.06
SYNE2-208ENST00000553289 NDUFA7O95182 113 aa8.43□□□□□ -1.06
SYNE2-208ENST00000553289 A8MZ25 164 aa8.43□□□□□ -1.06
SYNE2-208ENST00000553289 LRP4O75096 1905 aa8.43□□□□□ -1.06
SYNE2-208ENST00000553289 Q6ZQY7 126 aa8.43□□□□□ -1.06
SYNE2-208ENST00000553289 SERP2Q8N6R1 65 aa8.43□□□□□ -1.06
SYNE2-208ENST00000553289 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.42□□□□□ -1.06
SYNE2-208ENST00000553289 SMIM11BQ8TCY0 68 aa8.42□□□□□ -1.06
SYNE2-208ENST00000553289 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.42□□□□□ -1.06
SYNE2-208ENST00000553289 CHCHD7Q9BUK0 85 aa8.42□□□□□ -1.06
SYNE2-208ENST00000553289 OTOGLQ3ZCN5 2332 aa8.41□□□□□ -1.06
SYNE2-208ENST00000553289 LOC107984640A0A0U1RRK4 108 aa8.41□□□□□ -1.06
SYNE2-208ENST00000553289 Q6ZS46 218 aa8.41□□□□□ -1.06
SYNE2-208ENST00000553289 SCXQ7RTU7 201 aa8.41□□□□□ -1.06
SYNE2-208ENST00000553289 LOC100131303A0A0U1RQF7 123 aa8.4□□□□□ -1.06
SYNE2-208ENST00000553289 GAS8-AS1O95177 125 aa8.4□□□□□ -1.06
SYNE2-208ENST00000553289 LINC00310P59036 64 aa8.4□□□□□ -1.06
SYNE2-208ENST00000553289 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.06
SYNE2-208ENST00000553289 C7orf33Q8WU49 177 aa8.4□□□□□ -1.06
SYNE2-208ENST00000553289 V9GYY9 64 aa8.4□□□□□ -1.06
SYNE2-208ENST00000553289 NOTCH2Q04721 2471 aa8.4□□□□□ -1.06
SYNE2-208ENST00000553289 NDUFC2-KCTD14E9PQ53 114 aa8.4□□□□□ -1.06
SYNE2-208ENST00000553289 CASC2Q6XLA1 102 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms