RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TRAV26-1A0A087WT03 109 aa13.64□□□□□ -0.23
RBFOX1-215ENST00000553186 TRBV6-8A0A0A6YYG3 113 aa13.64□□□□□ -0.23
RBFOX1-215ENST00000553186 HNRNPA3P51991 378 aaKnown RBP13.64□□□□□ -0.23
RBFOX1-215ENST00000553186 ATP6V0E2Q8NHE4 81 aa13.64□□□□□ -0.23
RBFOX1-215ENST00000553186 TCTAP57738 103 aa13.64□□□□□ -0.23
RBFOX1-215ENST00000553186 TMEM243Q9BU79 118 aa13.64□□□□□ -0.23
RBFOX1-215ENST00000553186 TRBV25-1A0A075B6N4 114 aa13.63□□□□□ -0.23
RBFOX1-215ENST00000553186 A0A0J9YWU9 116 aa13.63□□□□□ -0.23
RBFOX1-215ENST00000553186 FGF6P10767 208 aa13.63□□□□□ -0.23
RBFOX1-215ENST00000553186 MRPS36P82909 103 aaKnown RBP13.63□□□□□ -0.23
RBFOX1-215ENST00000553186 Q6ZUT4 128 aa13.63□□□□□ -0.23
RBFOX1-215ENST00000553186 SPATA25Q9BR10 227 aa13.63□□□□□ -0.23
RBFOX1-215ENST00000553186 TP73-AS1Q9UF72 201 aa13.63□□□□□ -0.23
RBFOX1-215ENST00000553186 CSDC2Q9Y534 153 aaKnown RBP13.63□□□□□ -0.23
RBFOX1-215ENST00000553186 C11orf86A6NJI1 115 aa13.62□□□□□ -0.23
RBFOX1-215ENST00000553186 HTN3P15516 51 aa13.62□□□□□ -0.23
RBFOX1-215ENST00000553186 RNASE13Q5GAN3 156 aaKnown RBP13.62□□□□□ -0.23
RBFOX1-215ENST00000553186 MRAPQ8TCY5 172 aa13.62□□□□□ -0.23
RBFOX1-215ENST00000553186 IGKV2D-26A0A0A0MRZ7 120 aa13.61□□□□□ -0.23
RBFOX1-215ENST00000553186 COX8AP10176 69 aa13.61□□□□□ -0.23
RBFOX1-215ENST00000553186 TMEM97Q5BJF2 176 aa13.61□□□□□ -0.23
RBFOX1-215ENST00000553186 COL5A1-AS1Q5SY13 56 aa13.61□□□□□ -0.23
RBFOX1-215ENST00000553186 NFE4Q86UQ8 179 aa13.6□□□□□ -0.23
RBFOX1-215ENST00000553186 A0A096LPF7 62 aa13.59□□□□□ -0.23
RBFOX1-215ENST00000553186 H7C423 109 aa13.59□□□□□ -0.23
RBFOX1-215ENST00000553186 DGAT2L7PQ6IED9 249 aa13.59□□□□□ -0.23
RBFOX1-215ENST00000553186 SLC25A34Q6PIV7 304 aa13.59□□□□□ -0.23
RBFOX1-215ENST00000553186 Q6ZTC4 211 aa13.59□□□□□ -0.23
RBFOX1-215ENST00000553186 UBE2L6O14933 153 aa13.58□□□□□ -0.24
RBFOX1-215ENST00000553186 MRPS16Q9Y3D3 137 aaKnown RBP13.58□□□□□ -0.24
RBFOX1-215ENST00000553186 A0A0J9YXV3 536 aa13.58□□□□□ -0.24
RBFOX1-215ENST00000553186 NMUP48645 174 aa13.58□□□□□ -0.24
RBFOX1-215ENST00000553186 PCP2Q8IVA1 136 aa13.57□□□□□ -0.24
RBFOX1-215ENST00000553186 CHAC1Q9BUX1 264 aa13.57□□□□□ -0.24
RBFOX1-215ENST00000553186 CDC42SE2Q9NRR3 84 aa13.57□□□□□ -0.24
RBFOX1-215ENST00000553186 DNHD1Q96M86 4753 aa13.57□□□□□ -0.24
RBFOX1-215ENST00000553186 SMAGPQ0VAQ4 97 aa13.56□□□□□ -0.24
RBFOX1-215ENST00000553186 GAGE6Q13070 117 aa13.56□□□□□ -0.24
RBFOX1-215ENST00000553186 BOD1L2Q8IYS8 172 aa13.56□□□□□ -0.24
RBFOX1-215ENST00000553186 HUWE1Q7Z6Z7 4374 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-215ENST00000553186 MRPL23Q16540 153 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-215ENST00000553186 AMMECR1LQ6DCA0 310 aa13.55□□□□□ -0.24
RBFOX1-215ENST00000553186 OR5A1Q8NGJ0 315 aa13.55□□□□□ -0.24
RBFOX1-215ENST00000553186 C11orf45Q8TAV5 145 aa13.55□□□□□ -0.24
RBFOX1-215ENST00000553186 CHCHD5Q9BSY4 110 aa13.55□□□□□ -0.24
RBFOX1-215ENST00000553186 NANOS2P60321 138 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-215ENST00000553186 UBE2D1P51668 147 aa13.54□□□□□ -0.24
RBFOX1-215ENST00000553186 ICOSQ9Y6W8 199 aa13.54□□□□□ -0.24
RBFOX1-215ENST00000553186 E9PLD3 99 aa13.54□□□□□ -0.24
RBFOX1-215ENST00000553186 ZNF22P17026 224 aaPredicted RBP13.54□□□□□ -0.24
RBFOX1-215ENST00000553186 TMEM170BQ5T4T1 132 aa13.54□□□□□ -0.24
RBFOX1-215ENST00000553186 TTTY13Q9BZ97 58 aa13.54□□□□□ -0.24
RBFOX1-215ENST00000553186 H3BNG1 76 aa13.52□□□□□ -0.24
RBFOX1-215ENST00000553186 TMEM101Q96IK0 257 aa13.52□□□□□ -0.24
RBFOX1-215ENST00000553186 IGLV4-60A0A075B6I1 120 aa13.52□□□□□ -0.25
RBFOX1-215ENST00000553186 TINCRA0A1B0GVN0 87 aa13.52□□□□□ -0.25
RBFOX1-215ENST00000553186 HINT1P49773 126 aaPredicted RBP13.52□□□□□ -0.25
RBFOX1-215ENST00000553186 SH2D6Q7Z4S9 175 aa13.52□□□□□ -0.25
RBFOX1-215ENST00000553186 C2orf91Q6ZV80 131 aa13.51□□□□□ -0.25
RBFOX1-215ENST00000553186 TRAV8-6A0A0B4J262 113 aa13.49□□□□□ -0.25
RBFOX1-215ENST00000553186 TMEM223A0PJW6 202 aa13.49□□□□□ -0.25
RBFOX1-215ENST00000553186 MAPKAPK5-AS1Q8N8E1 139 aa13.49□□□□□ -0.25
RBFOX1-215ENST00000553186 HERVK_113P61574 105 aa13.49□□□□□ -0.25
RBFOX1-215ENST00000553186 FAM19A3Q7Z5A8 133 aa13.49□□□□□ -0.25
RBFOX1-215ENST00000553186 DEFB131BA0A096LNP1 70 aa13.48□□□□□ -0.25
RBFOX1-215ENST00000553186 A0A1B0GUV1 79 aa13.48□□□□□ -0.25
RBFOX1-215ENST00000553186 LINC00242Q5T6M2 205 aa13.48□□□□□ -0.25
RBFOX1-215ENST00000553186 Q6ZVH6 145 aa13.48□□□□□ -0.25
RBFOX1-215ENST00000553186 TIRAPP58753 221 aa13.48□□□□□ -0.25
RBFOX1-215ENST00000553186 TRAV13-1A0A0B4J241 112 aa13.47□□□□□ -0.25
RBFOX1-215ENST00000553186 KRTAP21-3Q3LHN1 58 aa13.47□□□□□ -0.25
RBFOX1-215ENST00000553186 MPV17L2Q567V2 206 aa13.47□□□□□ -0.25
RBFOX1-215ENST00000553186 IGLV5-45A0A087WSX0 123 aa13.47□□□□□ -0.25
RBFOX1-215ENST00000553186 TMEM262E9PQX1 116 aa13.47□□□□□ -0.25
RBFOX1-215ENST00000553186 RBX1P62877 108 aa13.47□□□□□ -0.25
RBFOX1-215ENST00000553186 COX6A2Q02221 97 aa13.47□□□□□ -0.25
RBFOX1-215ENST00000553186 SIVA1O15304 175 aa13.46□□□□□ -0.25
RBFOX1-215ENST00000553186 ORAOV1Q8WV07 137 aa13.46□□□□□ -0.25
RBFOX1-215ENST00000553186 GEMIN7Q9H840 131 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-215ENST00000553186 LELP1Q5T871 98 aa13.45□□□□□ -0.26
RBFOX1-215ENST00000553186 LYPD5Q6UWN5 251 aa13.45□□□□□ -0.26
RBFOX1-215ENST00000553186 B9D2Q9BPU9 175 aa13.45□□□□□ -0.26
RBFOX1-215ENST00000553186 DNAH9Q9NYC9 4486 aa13.45□□□□□ -0.26
RBFOX1-215ENST00000553186 TSPEAR-AS2P59090 65 aa13.45□□□□□ -0.26
RBFOX1-215ENST00000553186 CDKN2A-AS1Q9UH64 79 aa13.45□□□□□ -0.26
RBFOX1-215ENST00000553186 COL7A1Q02388 2944 aa13.44□□□□□ -0.26
RBFOX1-215ENST00000553186 HERVK_113P63121 156 aa13.44□□□□□ -0.26
RBFOX1-215ENST00000553186 SEC11AP67812 179 aa13.44□□□□□ -0.26
RBFOX1-215ENST00000553186 MYMXA0A1B0GTQ4 84 aa13.43□□□□□ -0.26
RBFOX1-215ENST00000553186 COX11Q9Y6N1 276 aa13.43□□□□□ -0.26
RBFOX1-215ENST00000553186 CCL25O15444 150 aa13.42□□□□□ -0.26
RBFOX1-215ENST00000553186 IGHV3-64A0A075B6Q5 118 aa13.42□□□□□ -0.26
RBFOX1-215ENST00000553186 LEPROTO15243 131 aa13.42□□□□□ -0.26
RBFOX1-215ENST00000553186 Q8N3U1 123 aa13.42□□□□□ -0.26
RBFOX1-215ENST00000553186 TRAV8-3A0A0A6YYJ7 113 aa13.41□□□□□ -0.26
RBFOX1-215ENST00000553186 TRAV10A0A0B4J240 114 aa13.41□□□□□ -0.26
RBFOX1-215ENST00000553186 J3QQQ9 107 aa13.41□□□□□ -0.26
RBFOX1-215ENST00000553186 HIGD1BQ9P298 99 aa13.41□□□□□ -0.26
RBFOX1-215ENST00000553186 STAB2Q8WWQ8 2551 aa13.4□□□□□ -0.27
RBFOX1-215ENST00000553186 IGHV1-58A0A0C4DH39 117 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms