RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SFRP2Q96HF1 295 aa3.19□□□□□ -1.9
CKAP4-203ENST00000553039 BIN3Q9NQY0 253 aa3.19□□□□□ -1.9
CKAP4-203ENST00000553039 LPAP08519 4548 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 TRBV6-1A0A0K0K1D8 114 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 A0A1B0GWB2 263 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 LTAP01374 205 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 CRPP02741 224 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 MGST1P10620 155 aaKnown RBP3.18□□□□□ -1.9
CKAP4-203ENST00000553039 CNBPP62633 177 aaKnown RBP3.18□□□□□ -1.9
CKAP4-203ENST00000553039 FLI1Q01543 452 aaPredicted RBP3.18□□□□□ -1.9
CKAP4-203ENST00000553039 TMEM78Q5T7P6 136 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 Q6ZQT7 251 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 GOLT1AQ6ZVE7 132 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 Q86TA4 180 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 BAGE2Q86Y30 109 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 TMEM183AQ8IXX5 376 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 SPACA4Q8TDM5 124 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 BTF3L4Q96K17 158 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 FAM19A4Q96LR4 140 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 IMMP2LQ96T52 175 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 NDFIP1Q9BT67 221 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 AGPAT4-IT1Q9H0P7 198 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 PYGO1Q9Y3Y4 419 aa3.18□□□□□ -1.9
CKAP4-203ENST00000553039 RBAKDNA6NC62 111 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 COLCA2A8K830 154 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.17□□□□□ -1.9
CKAP4-203ENST00000553039 TMEM262E9PQX1 116 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 K7EN84 100 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 M0R3E3 92 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 GCGP01275 180 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 RAB5AP20339 215 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 ERCC8Q13216 396 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 VAMP3Q15836 100 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 SAPCD1Q5SSQ6 148 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 FAM231DQ6ZW35 169 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 PRNTQ86SH4 94 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 MTURNQ8N3F0 131 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 OCR1Q9BZK8 76 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 OSTCQ9NRP0 149 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 LINC00474Q9P2X8 69 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 PSG8Q9UQ74 426 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 ZFP30Q9Y2G7 519 aa3.17□□□□□ -1.9
CKAP4-203ENST00000553039 IGLV1-50A0A075B6I6 118 aa3.16□□□□□ -1.9
CKAP4-203ENST00000553039 TRBV24-1A0A075B6N3 115 aa3.16□□□□□ -1.9
CKAP4-203ENST00000553039 TRAV9-1A0A075B6T8 112 aa3.16□□□□□ -1.9
CKAP4-203ENST00000553039 IGKV2-40A0A087WW87 121 aaPredicted RBP3.16□□□□□ -1.9
CKAP4-203ENST00000553039 IGKV2D-40P01614 121 aaPredicted RBP3.16□□□□□ -1.9
CKAP4-203ENST00000553039 P01737 135 aa3.16□□□□□ -1.9
CKAP4-203ENST00000553039 HLA-DQA1P01909 254 aa3.16□□□□□ -1.9
CKAP4-203ENST00000553039 MIAQ16674 131 aa3.16□□□□□ -1.9
CKAP4-203ENST00000553039 YPEL4Q96NS1 127 aa3.16□□□□□ -1.9
CKAP4-203ENST00000553039 RNASE7Q9H1E1 156 aaKnown RBP3.16□□□□□ -1.9
CKAP4-203ENST00000553039 RPP21Q9H633 154 aaKnown RBP3.16□□□□□ -1.9
CKAP4-203ENST00000553039 IL36BQ9NZH7 164 aa3.16□□□□□ -1.9
CKAP4-203ENST00000553039 ZNF492Q9P255 531 aa3.16□□□□□ -1.9
CKAP4-203ENST00000553039 V9GYV3 84 aa3.16□□□□□ -1.9
CKAP4-203ENST00000553039 IGLV4-3A0A075B6K6 122 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 TGIF2-C20orf24A0A0A6YYL0 155 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 C1orf196B1AJZ1 125 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 E9PLD3 99 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 GATCO43716 136 aaKnown RBP3.15□□□□□ -1.91
CKAP4-203ENST00000553039 CXCL1P09341 107 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 CHTF8P0CG12 524 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 RPS10P46783 165 aaKnown RBP3.15□□□□□ -1.91
CKAP4-203ENST00000553039 ZNF138P52744 262 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 NDUFV3P56181 108 aaKnown RBP3.15□□□□□ -1.91
CKAP4-203ENST00000553039 RAB5BP61020 215 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 PKIAP61925 76 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 ZNF876PQ49A33 203 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 FAM162BQ5T6X4 162 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 ENHOQ6UWT2 76 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 KRTAP19-1Q8IUB9 90 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 ZFAND2AQ8N6M9 145 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 FER1L6-AS1Q8NA97 138 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 DIRC1Q969H9 104 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 DNAJC30Q96LL9 226 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 NAT8BQ9UHF3 227 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 PKIGQ9Y2B9 76 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 LENEPQ9Y5L5 61 aa3.15□□□□□ -1.91
CKAP4-203ENST00000553039 A0A087X002 238 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 IGHV3-73A0A0B4J1V6 119 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 SMIM27A0A1W2PRY6 76 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 C19orf71A6NCJ1 209 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 A8MWL6 223 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 GNRH2O43555 120 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 TYMSP04818 313 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 GZMBP10144 247 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 COX6A2Q02221 97 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 COX19Q49B96 90 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 SMUG1Q53HV7 270 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 CFAP126Q5VTH2 177 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 Q6AWC8 147 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 OR2D3Q8NGH3 330 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 TSKUQ8WUA8 353 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 BORCS7Q96B45 105 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 KCNS1Q96KK3 526 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 GFRA4Q9GZZ7 299 aa3.14□□□□□ -1.91
CKAP4-203ENST00000553039 FABP5P3A8MUU1 101 aa3.13□□□□□ -1.91
CKAP4-203ENST00000553039 HIGD1CA8MV81 97 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms