RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
TRAFD1-208ENST00000552890 C16orf90A8MZG2 172 aa6.85□□□□□ -1.31
TRAFD1-208ENST00000552890 MRPS36P82909 103 aaKnown RBP6.85□□□□□ -1.31
TRAFD1-208ENST00000552890 CDC42SE2Q9NRR3 84 aa6.85□□□□□ -1.31
TRAFD1-208ENST00000552890 CYSLTR1Q9Y271 337 aa6.85□□□□□ -1.31
TRAFD1-208ENST00000552890 TRAPPC1Q9Y5R8 145 aa6.85□□□□□ -1.31
TRAFD1-208ENST00000552890 SPATA12Q7Z6I5 190 aa6.84□□□□□ -1.31
TRAFD1-208ENST00000552890 Q8N814 137 aa6.84□□□□□ -1.31
TRAFD1-208ENST00000552890 C2orf88Q9BSF0 95 aa6.84□□□□□ -1.31
TRAFD1-208ENST00000552890 MRPL18Q9H0U6 180 aaKnown RBP6.84□□□□□ -1.31
TRAFD1-208ENST00000552890 AP5S1Q9NUS5 200 aa6.84□□□□□ -1.31
TRAFD1-208ENST00000552890 IGLV4-60A0A075B6I1 120 aa6.83□□□□□ -1.32
TRAFD1-208ENST00000552890 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.83□□□□□ -1.32
TRAFD1-208ENST00000552890 LRCOL1A6NCL2 159 aa6.83□□□□□ -1.32
TRAFD1-208ENST00000552890 GAS8-AS1O95177 125 aa6.83□□□□□ -1.32
TRAFD1-208ENST00000552890 SEC11AP67812 179 aa6.83□□□□□ -1.32
TRAFD1-208ENST00000552890 FA2HQ7L5A8 372 aa6.83□□□□□ -1.32
TRAFD1-208ENST00000552890 UBE2D4Q9Y2X8 147 aa6.83□□□□□ -1.32
TRAFD1-208ENST00000552890 RYR2Q92736 4967 aa6.82□□□□□ -1.32
TRAFD1-208ENST00000552890 IGLV5-52A0A0A0MRZ9 124 aa6.82□□□□□ -1.32
TRAFD1-208ENST00000552890 LOC389332A0A1B0GUA5 103 aa6.82□□□□□ -1.32
TRAFD1-208ENST00000552890 APOMO95445 188 aa6.82□□□□□ -1.32
TRAFD1-208ENST00000552890 CD164L2Q6UWJ8 174 aa6.82□□□□□ -1.32
TRAFD1-208ENST00000552890 Q8N3U1 123 aa6.82□□□□□ -1.32
TRAFD1-208ENST00000552890 ALKBH7Q9BT30 221 aaPredicted RBP6.82□□□□□ -1.32
TRAFD1-208ENST00000552890 RYR3Q15413 4870 aa6.82□□□□□ -1.32
TRAFD1-208ENST00000552890 LINC00959A0A1B0GUT2 108 aa6.81□□□□□ -1.32
TRAFD1-208ENST00000552890 GCSHP23434 173 aa6.81□□□□□ -1.32
TRAFD1-208ENST00000552890 CHCHD10Q8WYQ3 142 aaPredicted RBP6.81□□□□□ -1.32
TRAFD1-208ENST00000552890 TMEM141Q96I45 108 aa6.81□□□□□ -1.32
TRAFD1-208ENST00000552890 CLPSL2Q6UWE3 100 aa6.8□□□□□ -1.32
TRAFD1-208ENST00000552890 C2orf66Q6UXQ4 117 aa6.8□□□□□ -1.32
TRAFD1-208ENST00000552890 TEX43Q6ZNM6 134 aa6.8□□□□□ -1.32
TRAFD1-208ENST00000552890 SLC7A5P1Q8MH63 180 aa6.8□□□□□ -1.32
TRAFD1-208ENST00000552890 BAALCQ8WXS3 180 aa6.8□□□□□ -1.32
TRAFD1-208ENST00000552890 TIMM17AQ99595 171 aa6.8□□□□□ -1.32
TRAFD1-208ENST00000552890 VCX2Q9H322 139 aa6.8□□□□□ -1.32
TRAFD1-208ENST00000552890 IGLV10-54A0A075B6I4 117 aa6.79□□□□□ -1.32
TRAFD1-208ENST00000552890 TGIF2-C20orf24A0A0A6YYL0 155 aa6.79□□□□□ -1.32
TRAFD1-208ENST00000552890 IGHV1-58A0A0C4DH39 117 aa6.79□□□□□ -1.32
TRAFD1-208ENST00000552890 IGKV3OR2-268A0A0C4DH90 116 aa6.79□□□□□ -1.32
TRAFD1-208ENST00000552890 LINC01546A6NGU7 62 aa6.79□□□□□ -1.32
TRAFD1-208ENST00000552890 USP17L23D6RBM5 183 aa6.79□□□□□ -1.32
TRAFD1-208ENST00000552890 F8WDY8 70 aa6.79□□□□□ -1.32
TRAFD1-208ENST00000552890 COX7A2LO14548 114 aa6.79□□□□□ -1.32
TRAFD1-208ENST00000552890 CDK2AP2O75956 126 aa6.79□□□□□ -1.32
TRAFD1-208ENST00000552890 MALP21145 153 aa6.79□□□□□ -1.32
TRAFD1-208ENST00000552890 KIAA1644Q3SXP7 199 aa6.79□□□□□ -1.32
TRAFD1-208ENST00000552890 ERASQ7Z444 233 aa6.79□□□□□ -1.32
TRAFD1-208ENST00000552890 DEFB104AQ8WTQ1 72 aa6.79□□□□□ -1.32
TRAFD1-208ENST00000552890 GAGE12HA6NDE8 117 aa6.78□□□□□ -1.32
TRAFD1-208ENST00000552890 IFITM10A6NMD0 228 aa6.78□□□□□ -1.32
TRAFD1-208ENST00000552890 LINC00614P0C842 121 aa6.78□□□□□ -1.32
TRAFD1-208ENST00000552890 TOMM6Q96B49 74 aa6.78□□□□□ -1.32
TRAFD1-208ENST00000552890 HYDINQ4G0P3 5121 aa6.78□□□□□ -1.32
TRAFD1-208ENST00000552890 TRAV13-1A0A0B4J241 112 aa6.77□□□□□ -1.33
TRAFD1-208ENST00000552890 hDV102S1A0JD36 115 aa6.77□□□□□ -1.33
TRAFD1-208ENST00000552890 ZNF561-AS1K7EIQ3 104 aa6.77□□□□□ -1.33
TRAFD1-208ENST00000552890 XCL1P47992 114 aa6.77□□□□□ -1.33
TRAFD1-208ENST00000552890 CNBPP62633 177 aaKnown RBP6.77□□□□□ -1.33
TRAFD1-208ENST00000552890 RPL39P62891 51 aaKnown RBP6.77□□□□□ -1.33
TRAFD1-208ENST00000552890 LINC01561Q8N1V8 128 aa6.77□□□□□ -1.33
TRAFD1-208ENST00000552890 CHCHD1Q96BP2 118 aaKnown RBP6.77□□□□□ -1.33
TRAFD1-208ENST00000552890 SCGB3A1Q96QR1 104 aa6.77□□□□□ -1.33
TRAFD1-208ENST00000552890 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.76□□□□□ -1.33
TRAFD1-208ENST00000552890 ATP5LO75964 103 aa6.76□□□□□ -1.33
TRAFD1-208ENST00000552890 S100A1P23297 94 aa6.76□□□□□ -1.33
TRAFD1-208ENST00000552890 KRTAP26-1Q6PEX3 210 aa6.76□□□□□ -1.33
TRAFD1-208ENST00000552890 MAPKAPK5-AS1Q8N8E1 139 aa6.76□□□□□ -1.33
TRAFD1-208ENST00000552890 GVQW2A0A096LPI5 108 aaPredicted RBP6.75□□□□□ -1.33
TRAFD1-208ENST00000552890 LECT2O14960 151 aa6.75□□□□□ -1.33
TRAFD1-208ENST00000552890 KRTAP10-2P60368 255 aa6.75□□□□□ -1.33
TRAFD1-208ENST00000552890 HERVK_113P63121 156 aa6.75□□□□□ -1.33
TRAFD1-208ENST00000552890 FOXI1Q12951 378 aa6.75□□□□□ -1.33
TRAFD1-208ENST00000552890 Q6ZUT4 128 aa6.75□□□□□ -1.33
TRAFD1-208ENST00000552890 OR10D4PQ8NGN7 298 aa6.75□□□□□ -1.33
TRAFD1-208ENST00000552890 C18orf32Q8TCD1 76 aa6.75□□□□□ -1.33
TRAFD1-208ENST00000552890 YPEL4Q96NS1 127 aa6.75□□□□□ -1.33
TRAFD1-208ENST00000552890 LINC00474Q9P2X8 69 aa6.75□□□□□ -1.33
TRAFD1-208ENST00000552890 IGLV4-3A0A075B6K6 122 aa6.74□□□□□ -1.33
TRAFD1-208ENST00000552890 IGIPA6NJ69 53 aa6.74□□□□□ -1.33
TRAFD1-208ENST00000552890 HBDP02042 147 aa6.74□□□□□ -1.33
TRAFD1-208ENST00000552890 BAGE3Q86Y29 109 aa6.74□□□□□ -1.33
TRAFD1-208ENST00000552890 CBLN2Q8IUK8 224 aa6.74□□□□□ -1.33
TRAFD1-208ENST00000552890 AMELXQ99217 191 aa6.74□□□□□ -1.33
TRAFD1-208ENST00000552890 GEMIN7Q9H840 131 aaKnown RBP6.74□□□□□ -1.33
TRAFD1-208ENST00000552890 DNAH10Q8IVF4 4471 aa6.74□□□□□ -1.33
TRAFD1-208ENST00000552890 FRAS1Q86XX4 4008 aa6.74□□□□□ -1.33
TRAFD1-208ENST00000552890 DNAH2Q9P225 4427 aa6.73□□□□□ -1.33
TRAFD1-208ENST00000552890 HECTD4Q9Y4D8 3996 aa6.73□□□□□ -1.33
TRAFD1-208ENST00000552890 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.73□□□□□ -1.33
TRAFD1-208ENST00000552890 IGHV3-64A0A075B6Q5 118 aa6.73□□□□□ -1.33
TRAFD1-208ENST00000552890 C9orf163Q8N9P6 203 aa6.73□□□□□ -1.33
TRAFD1-208ENST00000552890 C2orf48Q96LS8 159 aa6.73□□□□□ -1.33
TRAFD1-208ENST00000552890 DNAH17Q9UFH2 4485 aa6.72□□□□□ -1.33
TRAFD1-208ENST00000552890 A0A087WZ39 114 aa6.72□□□□□ -1.33
TRAFD1-208ENST00000552890 IGHV3OR16-9A0A0B4J2B5 98 aa6.72□□□□□ -1.33
TRAFD1-208ENST00000552890 PRSS1P07477 247 aa6.72□□□□□ -1.33
TRAFD1-208ENST00000552890 PMVKQ15126 192 aa6.72□□□□□ -1.33
TRAFD1-208ENST00000552890 FAM19A3Q7Z5A8 133 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms