RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 Q8N976 141 aa5.13□□□□□ -1.59
NPAS3-213ENST00000552874 ALKBH7Q9BT30 221 aaPredicted RBP5.13□□□□□ -1.59
NPAS3-213ENST00000552874 TMEM243Q9BU79 118 aa5.13□□□□□ -1.59
NPAS3-213ENST00000552874 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.12□□□□□ -1.59
NPAS3-213ENST00000552874 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
NPAS3-213ENST00000552874 A0A1B0GUV1 79 aa5.12□□□□□ -1.59
NPAS3-213ENST00000552874 IGKV2-29A2NJV5 120 aaPredicted RBP5.12□□□□□ -1.59
NPAS3-213ENST00000552874 LINC01546A6NGU7 62 aa5.12□□□□□ -1.59
NPAS3-213ENST00000552874 C5orf52A6NGY3 159 aa5.12□□□□□ -1.59
NPAS3-213ENST00000552874 PPP1R17O96001 155 aa5.12□□□□□ -1.59
NPAS3-213ENST00000552874 AMTP48728 403 aa5.12□□□□□ -1.59
NPAS3-213ENST00000552874 GAGE6Q13070 117 aa5.12□□□□□ -1.59
NPAS3-213ENST00000552874 KIAA1644Q3SXP7 199 aa5.12□□□□□ -1.59
NPAS3-213ENST00000552874 COX19Q49B96 90 aa5.12□□□□□ -1.59
NPAS3-213ENST00000552874 C1orf134Q5TEV5 83 aa5.12□□□□□ -1.59
NPAS3-213ENST00000552874 ENHOQ6UWT2 76 aa5.12□□□□□ -1.59
NPAS3-213ENST00000552874 MRPL52Q86TS9 123 aaKnown RBP5.12□□□□□ -1.59
NPAS3-213ENST00000552874 URB1-AS1Q96HZ7 61 aa5.12□□□□□ -1.59
NPAS3-213ENST00000552874 C2orf88Q9BSF0 95 aa5.12□□□□□ -1.59
NPAS3-213ENST00000552874 LRCOL1A6NCL2 159 aa5.11□□□□□ -1.59
NPAS3-213ENST00000552874 COLCA2A8K830 154 aa5.11□□□□□ -1.59
NPAS3-213ENST00000552874 H7C423 109 aa5.11□□□□□ -1.59
NPAS3-213ENST00000552874 VCYO14598 125 aa5.11□□□□□ -1.59
NPAS3-213ENST00000552874 PMCHP20382 165 aa5.11□□□□□ -1.59
NPAS3-213ENST00000552874 MAPKAPK5-AS1Q8N8E1 139 aa5.11□□□□□ -1.59
NPAS3-213ENST00000552874 CHCHD5Q9BSY4 110 aa5.11□□□□□ -1.59
NPAS3-213ENST00000552874 SMCO4Q9NRQ5 59 aa5.11□□□□□ -1.59
NPAS3-213ENST00000552874 UBE2D4Q9Y2X8 147 aa5.11□□□□□ -1.59
NPAS3-213ENST00000552874 PKHD1L1Q86WI1 4243 aa5.11□□□□□ -1.59
NPAS3-213ENST00000552874 EIF4EBP3O60516 100 aaPredicted RBP5.1□□□□□ -1.59
NPAS3-213ENST00000552874 FGF6P10767 208 aa5.1□□□□□ -1.59
NPAS3-213ENST00000552874 PKIAP61925 76 aa5.1□□□□□ -1.59
NPAS3-213ENST00000552874 RPL39P62891 51 aaKnown RBP5.1□□□□□ -1.59
NPAS3-213ENST00000552874 WFDC2Q14508 124 aa5.1□□□□□ -1.59
NPAS3-213ENST00000552874 LINC00336Q6ZUF6 198 aa5.1□□□□□ -1.59
NPAS3-213ENST00000552874 Q8N8P6 123 aa5.1□□□□□ -1.59
NPAS3-213ENST00000552874 KLK12Q9UKR0 248 aa5.1□□□□□ -1.59
NPAS3-213ENST00000552874 A0A087WX48 190 aa5.09□□□□□ -1.59
NPAS3-213ENST00000552874 A0A096LNJ9 63 aa5.09□□□□□ -1.59
NPAS3-213ENST00000552874 TCAPO15273 167 aa5.09□□□□□ -1.59
NPAS3-213ENST00000552874 ZNF25P17030 456 aaPredicted RBP5.09□□□□□ -1.59
NPAS3-213ENST00000552874 RAB5BP61020 215 aa5.09□□□□□ -1.59
NPAS3-213ENST00000552874 C18orf32Q8TCD1 76 aa5.09□□□□□ -1.59
NPAS3-213ENST00000552874 TIMM21Q9BVV7 248 aa5.09□□□□□ -1.59
NPAS3-213ENST00000552874 MAP1LC3AQ9H492 121 aa5.09□□□□□ -1.59
NPAS3-213ENST00000552874 TRAV9-2A0A087WT02 112 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 A0A1B0GV90 55 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 PRSS29PA6NIE9 313 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 IFI27P40305 119 aaPredicted RBP5.08□□□□□ -1.6
NPAS3-213ENST00000552874 LINC00310P59036 64 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 FABP9Q0Z7S8 132 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 CLPSL2Q6UWE3 100 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 Q6ZUT4 128 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 NFE4Q86UQ8 179 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 UBE2WQ96B02 151 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 C14orf144Q96I85 54 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 KIR2DL4Q99706 377 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 Q9HAA7 133 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 CDC42SE2Q9NRR3 84 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 CSDC2Q9Y534 153 aaKnown RBP5.08□□□□□ -1.6
NPAS3-213ENST00000552874 TRAPPC1Q9Y5R8 145 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 ABCA13Q86UQ4 5058 aa5.08□□□□□ -1.6
NPAS3-213ENST00000552874 TRAV8-3A0A0A6YYJ7 113 aa5.07□□□□□ -1.6
NPAS3-213ENST00000552874 LOC389332A0A1B0GUA5 103 aa5.07□□□□□ -1.6
NPAS3-213ENST00000552874 K7EMI3 77 aa5.07□□□□□ -1.6
NPAS3-213ENST00000552874 ANGP03950 147 aaKnown RBP5.07□□□□□ -1.6
NPAS3-213ENST00000552874 FCER1GP30273 86 aa5.07□□□□□ -1.6
NPAS3-213ENST00000552874 PCP4P48539 62 aa5.07□□□□□ -1.6
NPAS3-213ENST00000552874 REG3AQ06141 175 aa5.07□□□□□ -1.6
NPAS3-213ENST00000552874 MIAQ16674 131 aa5.07□□□□□ -1.6
NPAS3-213ENST00000552874 LINC00173Q6ZV60 143 aa5.07□□□□□ -1.6
NPAS3-213ENST00000552874 LINC00269Q8N2A0 174 aa5.07□□□□□ -1.6
NPAS3-213ENST00000552874 NXT2Q9NPJ8 142 aaKnown RBP5.07□□□□□ -1.6
NPAS3-213ENST00000552874 IGLV4-3A0A075B6K6 122 aa5.06□□□□□ -1.6
NPAS3-213ENST00000552874 A0A087WTM6 91 aa5.06□□□□□ -1.6
NPAS3-213ENST00000552874 TMEM262E9PQX1 116 aa5.06□□□□□ -1.6
NPAS3-213ENST00000552874 UBE2L6O14933 153 aa5.06□□□□□ -1.6
NPAS3-213ENST00000552874 RAB5AP20339 215 aa5.06□□□□□ -1.6
NPAS3-213ENST00000552874 KRTAP10-2P60368 255 aa5.06□□□□□ -1.6
NPAS3-213ENST00000552874 MRPS36P82909 103 aaKnown RBP5.06□□□□□ -1.6
NPAS3-213ENST00000552874 Q0VG73 95 aa5.06□□□□□ -1.6
NPAS3-213ENST00000552874 OR5A1Q8NGJ0 315 aa5.06□□□□□ -1.6
NPAS3-213ENST00000552874 SPANXA1Q9NS26 97 aa5.06□□□□□ -1.6
NPAS3-213ENST00000552874 PYGO1Q9Y3Y4 419 aa5.06□□□□□ -1.6
NPAS3-213ENST00000552874 IGIPA6NJ69 53 aa5.05□□□□□ -1.6
NPAS3-213ENST00000552874 C1orf196B1AJZ1 125 aa5.05□□□□□ -1.6
NPAS3-213ENST00000552874 TRGC2P03986 189 aa5.05□□□□□ -1.6
NPAS3-213ENST00000552874 SNRPEP62304 92 aaKnown RBP5.05□□□□□ -1.6
NPAS3-213ENST00000552874 RNASE13Q5GAN3 156 aaKnown RBP5.05□□□□□ -1.6
NPAS3-213ENST00000552874 C2orf66Q6UXQ4 117 aa5.05□□□□□ -1.6
NPAS3-213ENST00000552874 TOMM6Q96B49 74 aa5.05□□□□□ -1.6
NPAS3-213ENST00000552874 OPRPNQ99935 248 aaPredicted RBP5.05□□□□□ -1.6
NPAS3-213ENST00000552874 IGKV2D-24A0A075B6R9 120 aa5.04□□□□□ -1.6
NPAS3-213ENST00000552874 LINC00959A0A1B0GUT2 108 aa5.04□□□□□ -1.6
NPAS3-213ENST00000552874 CRPP02741 224 aa5.04□□□□□ -1.6
NPAS3-213ENST00000552874 NPSP0C0P6 89 aa5.04□□□□□ -1.6
NPAS3-213ENST00000552874 FOXI1Q12951 378 aa5.04□□□□□ -1.6
NPAS3-213ENST00000552874 ORMDL2Q53FV1 153 aa5.04□□□□□ -1.6
NPAS3-213ENST00000552874 AMMECR1LQ6DCA0 310 aa5.04□□□□□ -1.6
NPAS3-213ENST00000552874 RNASEKQ6P5S7 137 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms