RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 PKD1L1Q8TDX9 2849 aa8.85□□□□□ -0.99
CACNB3-223ENST00000552480 MRPL23Q16540 153 aaKnown RBP8.84□□□□□ -0.99
CACNB3-223ENST00000552480 DGAT2L7PQ6IED9 249 aa8.84□□□□□ -0.99
CACNB3-223ENST00000552480 Q6ZTC4 211 aa8.84□□□□□ -0.99
CACNB3-223ENST00000552480 SH2D6Q7Z4S9 175 aa8.84□□□□□ -0.99
CACNB3-223ENST00000552480 C11orf45Q8TAV5 145 aa8.84□□□□□ -0.99
CACNB3-223ENST00000552480 UQCR10Q9UDW1 63 aa8.84□□□□□ -0.99
CACNB3-223ENST00000552480 ICOSQ9Y6W8 199 aa8.84□□□□□ -0.99
CACNB3-223ENST00000552480 H3BNG1 76 aa8.83□□□□□ -1
CACNB3-223ENST00000552480 ZNF25P17030 456 aaPredicted RBP8.83□□□□□ -1
CACNB3-223ENST00000552480 AMMECR1LQ6DCA0 310 aa8.83□□□□□ -1
CACNB3-223ENST00000552480 NFE4Q86UQ8 179 aa8.83□□□□□ -1
CACNB3-223ENST00000552480 C14orf144Q96I85 54 aa8.83□□□□□ -1
CACNB3-223ENST00000552480 C11orf86A6NJI1 115 aa8.82□□□□□ -1
CACNB3-223ENST00000552480 LINC00587B1AMM8 73 aa8.82□□□□□ -1
CACNB3-223ENST00000552480 NANOS2P60321 138 aaKnown RBP8.82□□□□□ -1
CACNB3-223ENST00000552480 OR5A1Q8NGJ0 315 aa8.82□□□□□ -1
CACNB3-223ENST00000552480 TMEM101Q96IK0 257 aa8.82□□□□□ -1
CACNB3-223ENST00000552480 C2orf88Q9BSF0 95 aa8.82□□□□□ -1
CACNB3-223ENST00000552480 CHCHD5Q9BSY4 110 aa8.82□□□□□ -1
CACNB3-223ENST00000552480 A0A096LPF7 62 aa8.81□□□□□ -1
CACNB3-223ENST00000552480 COX8AP10176 69 aa8.81□□□□□ -1
CACNB3-223ENST00000552480 GAGE6Q13070 117 aa8.81□□□□□ -1
CACNB3-223ENST00000552480 RNASE13Q5GAN3 156 aaKnown RBP8.81□□□□□ -1
CACNB3-223ENST00000552480 SLC25A34Q6PIV7 304 aa8.81□□□□□ -1
CACNB3-223ENST00000552480 B9D2Q9BPU9 175 aa8.81□□□□□ -1
CACNB3-223ENST00000552480 CHAC1Q9BUX1 264 aa8.81□□□□□ -1
CACNB3-223ENST00000552480 A0A0J9YXV3 536 aa8.8□□□□□ -1
CACNB3-223ENST00000552480 CDC42SE2Q9NRR3 84 aa8.8□□□□□ -1
CACNB3-223ENST00000552480 TINCRA0A1B0GVN0 87 aa8.79□□□□□ -1
CACNB3-223ENST00000552480 NMUP48645 174 aa8.79□□□□□ -1
CACNB3-223ENST00000552480 UBE2D1P51668 147 aa8.79□□□□□ -1
CACNB3-223ENST00000552480 TCTAP57738 103 aa8.79□□□□□ -1
CACNB3-223ENST00000552480 HERVK_113P61574 105 aa8.79□□□□□ -1
CACNB3-223ENST00000552480 DEFB131BA0A096LNP1 70 aa8.78□□□□□ -1
CACNB3-223ENST00000552480 IGKV2D-26A0A0A0MRZ7 120 aa8.78□□□□□ -1
CACNB3-223ENST00000552480 E9PLD3 99 aa8.78□□□□□ -1
CACNB3-223ENST00000552480 DLEU1O43261 78 aa8.78□□□□□ -1
CACNB3-223ENST00000552480 ZNF22P17026 224 aaPredicted RBP8.78□□□□□ -1
CACNB3-223ENST00000552480 HNRNPA3P51991 378 aaKnown RBP8.78□□□□□ -1
CACNB3-223ENST00000552480 TIRAPP58753 221 aa8.78□□□□□ -1
CACNB3-223ENST00000552480 TMEM170BQ5T4T1 132 aa8.78□□□□□ -1
CACNB3-223ENST00000552480 LELP1Q5T871 98 aa8.78□□□□□ -1
CACNB3-223ENST00000552480 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
CACNB3-223ENST00000552480 NBEAL2Q6ZNJ1 2754 aa8.78□□□□□ -1
CACNB3-223ENST00000552480 TRAV10A0A0B4J240 114 aa8.77□□□□□ -1.01
CACNB3-223ENST00000552480 DEFA6Q01524 100 aa8.77□□□□□ -1.01
CACNB3-223ENST00000552480 BOD1L2Q8IYS8 172 aa8.77□□□□□ -1.01
CACNB3-223ENST00000552480 IGLV4-60A0A075B6I1 120 aa8.76□□□□□ -1.01
CACNB3-223ENST00000552480 A0A1B0GUV1 79 aa8.76□□□□□ -1.01
CACNB3-223ENST00000552480 SEC11AP67812 179 aa8.76□□□□□ -1.01
CACNB3-223ENST00000552480 PCP2Q8IVA1 136 aa8.76□□□□□ -1.01
CACNB3-223ENST00000552480 TP73-AS1Q9UF72 201 aa8.76□□□□□ -1.01
CACNB3-223ENST00000552480 TMEM223A0PJW6 202 aa8.75□□□□□ -1.01
CACNB3-223ENST00000552480 TMEM262E9PQX1 116 aa8.75□□□□□ -1.01
CACNB3-223ENST00000552480 RBX1P62877 108 aa8.75□□□□□ -1.01
CACNB3-223ENST00000552480 HERVK_113P63121 156 aa8.75□□□□□ -1.01
CACNB3-223ENST00000552480 GEMIN7Q9H840 131 aaKnown RBP8.75□□□□□ -1.01
CACNB3-223ENST00000552480 MRPS16Q9Y3D3 137 aaKnown RBP8.75□□□□□ -1.01
CACNB3-223ENST00000552480 IGLV5-45A0A087WSX0 123 aa8.74□□□□□ -1.01
CACNB3-223ENST00000552480 MPV17L2Q567V2 206 aa8.74□□□□□ -1.01
CACNB3-223ENST00000552480 LINC00242Q5T6M2 205 aa8.74□□□□□ -1.01
CACNB3-223ENST00000552480 LYPD5Q6UWN5 251 aa8.74□□□□□ -1.01
CACNB3-223ENST00000552480 TRAV13-1A0A0B4J241 112 aa8.73□□□□□ -1.01
CACNB3-223ENST00000552480 TRAV8-6A0A0B4J262 113 aa8.73□□□□□ -1.01
CACNB3-223ENST00000552480 SIVA1O15304 175 aa8.73□□□□□ -1.01
CACNB3-223ENST00000552480 NHLRC4P0CG21 123 aaPredicted RBP8.73□□□□□ -1.01
CACNB3-223ENST00000552480 CTAG1AP78358 180 aa8.73□□□□□ -1.01
CACNB3-223ENST00000552480 LINC00469Q8N7U9 141 aa8.73□□□□□ -1.01
CACNB3-223ENST00000552480 H3BRM9 83 aa8.72□□□□□ -1.01
CACNB3-223ENST00000552480 LEPROTO15243 131 aa8.72□□□□□ -1.01
CACNB3-223ENST00000552480 C2orf91Q6ZV80 131 aa8.72□□□□□ -1.01
CACNB3-223ENST00000552480 C15orf53Q8NAA6 179 aa8.72□□□□□ -1.01
CACNB3-223ENST00000552480 TTTY13Q9BZ97 58 aa8.72□□□□□ -1.01
CACNB3-223ENST00000552480 COX6A2Q02221 97 aa8.71□□□□□ -1.02
CACNB3-223ENST00000552480 MAPKAPK5-AS1Q8N8E1 139 aa8.71□□□□□ -1.02
CACNB3-223ENST00000552480 PLEKHB2Q96CS7 222 aa8.71□□□□□ -1.02
CACNB3-223ENST00000552480 CDKN2A-AS1Q9UH64 79 aa8.71□□□□□ -1.02
CACNB3-223ENST00000552480 NOTCH1P46531 2555 aa8.7□□□□□ -1.02
CACNB3-223ENST00000552480 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
CACNB3-223ENST00000552480 J3QQQ9 107 aa8.7□□□□□ -1.02
CACNB3-223ENST00000552480 M0R143 59 aa8.7□□□□□ -1.02
CACNB3-223ENST00000552480 TSPEAR-AS2P59090 65 aa8.7□□□□□ -1.02
CACNB3-223ENST00000552480 HIGD1BQ9P298 99 aa8.7□□□□□ -1.02
CACNB3-223ENST00000552480 HUWE1Q7Z6Z7 4374 aaKnown RBP8.7□□□□□ -1.02
CACNB3-223ENST00000552480 MGAM2Q2M2H8 2515 aa8.69□□□□□ -1.02
CACNB3-223ENST00000552480 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
CACNB3-223ENST00000552480 IGKV3OR2-268A0A0C4DH90 116 aa8.69□□□□□ -1.02
CACNB3-223ENST00000552480 LINC00959A0A1B0GUT2 108 aa8.69□□□□□ -1.02
CACNB3-223ENST00000552480 CCL25O15444 150 aa8.69□□□□□ -1.02
CACNB3-223ENST00000552480 SPINK8P0C7L1 97 aa8.69□□□□□ -1.02
CACNB3-223ENST00000552480 LGALS3P17931 250 aaKnown RBP8.69□□□□□ -1.02
CACNB3-223ENST00000552480 NBEAL1Q6ZS30 2694 aa8.68□□□□□ -1.02
CACNB3-223ENST00000552480 IGHV3-64A0A075B6Q5 118 aa8.68□□□□□ -1.02
CACNB3-223ENST00000552480 ZNF815PA8K554 130 aa8.68□□□□□ -1.02
CACNB3-223ENST00000552480 ANGP03950 147 aaKnown RBP8.68□□□□□ -1.02
CACNB3-223ENST00000552480 IGHV3-30-3P0DP02 117 aa8.68□□□□□ -1.02
CACNB3-223ENST00000552480 SS18Q15532 418 aa8.68□□□□□ -1.02
CACNB3-223ENST00000552480 ESRGQ1W209 222 aa8.68□□□□□ -1.02
CACNB3-223ENST00000552480 SNHG12Q9BXW3 62 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms