RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, human

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3A-223	ENST00000552352	SMCR5	Q8TEV8	140 aa		5.81	□□□□□ -1.48
RPH3A-223	ENST00000552352	DUX5	Q96PT3	197 aa		5.81	□□□□□ -1.48
RPH3A-223	ENST00000552352	USP9X	Q93008	2570 aa	Predicted RBP	5.81	□□□□□ -1.48
RPH3A-223	ENST00000552352	TIRAP	P58753	221 aa		5.81	□□□□□ -1.48
RPH3A-223	ENST00000552352	COPS9	Q8WXC6	57 aa		5.81	□□□□□ -1.48
RPH3A-223	ENST00000552352	ZNF702P	Q9H963	129 aa		5.81	□□□□□ -1.48
RPH3A-223	ENST00000552352	CDKN2A-AS1	Q9UH64	79 aa		5.81	□□□□□ -1.48
RPH3A-223	ENST00000552352	AKAP6	Q13023	2319 aa		5.8	□□□□□ -1.48
RPH3A-223	ENST00000552352	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	5.8	□□□□□ -1.48
RPH3A-223	ENST00000552352	IGKV2-29	A2NJV5	120 aa	Predicted RBP	5.8	□□□□□ -1.48
RPH3A-223	ENST00000552352	KRTAP10-9	P60411	292 aa		5.8	□□□□□ -1.48
RPH3A-223	ENST00000552352	C3orf22	Q8N5N4	141 aa		5.8	□□□□□ -1.48
RPH3A-223	ENST00000552352	TRAC	P01848	142 aa		5.8	□□□□□ -1.48
RPH3A-223	ENST00000552352	PIK3CD-AS1	Q5SR53	167 aa		5.8	□□□□□ -1.48
RPH3A-223	ENST00000552352	C9orf153	Q5TBE3	101 aa		5.8	□□□□□ -1.48
RPH3A-223	ENST00000552352	C3orf56	Q8N813	242 aa		5.8	□□□□□ -1.48
RPH3A-223	ENST00000552352	UBE2E2	Q96LR5	201 aa		5.8	□□□□□ -1.48
RPH3A-223	ENST00000552352	LINC00467	Q9BRT7	94 aa		5.8	□□□□□ -1.48
RPH3A-223	ENST00000552352	CR1	P17927	2039 aa		5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	UQCRQ	O14949	82 aa		5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	NDUFA7	O95182	113 aa		5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	RBMY1A1	P0DJD3	496 aa	Known RBP	5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	RBMY1C	P0DJD4	496 aa		5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	CXCL5	P42830	114 aa		5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	DAZ2	Q13117	558 aa	Known RBP	5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	RBMY1F	Q15415	496 aa	Known RBP	5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	BEAN1	Q3B7T3	259 aa		5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	DAZ4	Q86SG3	579 aa	Known RBP	5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	DAZ3	Q9NR90	486 aa	Known RBP	5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	PEMT	Q9UBM1	199 aa		5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	UBR5	O95071	2799 aa	Predicted RBP	5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	IGLV5-39	A0A0G2JS06	123 aa		5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352		Q9H8V8	135 aa		5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	ZFYVE26	Q68DK2	2539 aa		5.79	□□□□□ -1.48
RPH3A-223	ENST00000552352	FAM222A	Q5U5X8	452 aa		5.78	□□□□□ -1.48
RPH3A-223	ENST00000552352		Q6ZSN1	163 aa		5.78	□□□□□ -1.48
RPH3A-223	ENST00000552352	C5orf38	Q86SI9	138 aa		5.78	□□□□□ -1.48
RPH3A-223	ENST00000552352	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	5.78	□□□□□ -1.48
RPH3A-223	ENST00000552352	LINC00526	Q96FQ7	95 aa		5.78	□□□□□ -1.48
RPH3A-223	ENST00000552352	DNAJC30	Q96LL9	226 aa		5.78	□□□□□ -1.48
RPH3A-223	ENST00000552352		Q96MF0	132 aa		5.78	□□□□□ -1.48
RPH3A-223	ENST00000552352		Q9UF83	564 aa		5.78	□□□□□ -1.48
RPH3A-223	ENST00000552352	KNCN	A6PVL3	124 aa		5.78	□□□□□ -1.48
RPH3A-223	ENST00000552352	HERVK_113	P63121	156 aa		5.78	□□□□□ -1.48
RPH3A-223	ENST00000552352	C1orf43	Q9BWL3	253 aa		5.78	□□□□□ -1.48
RPH3A-223	ENST00000552352	PPDPF	Q9H3Y8	114 aa		5.78	□□□□□ -1.48
RPH3A-223	ENST00000552352	BAALC-AS2	P0C853	105 aa		5.77	□□□□□ -1.49
RPH3A-223	ENST00000552352	HTN1	P15515	57 aa		5.77	□□□□□ -1.49
RPH3A-223	ENST00000552352	SOSTDC1	Q6X4U4	206 aa		5.77	□□□□□ -1.49
RPH3A-223	ENST00000552352	INAFM2	P0DMQ5	153 aa		5.77	□□□□□ -1.49
RPH3A-223	ENST00000552352	LINC00694	P0DN24	101 aa		5.77	□□□□□ -1.49
RPH3A-223	ENST00000552352	COX6A2	Q02221	97 aa		5.77	□□□□□ -1.49
RPH3A-223	ENST00000552352	ZNF415	Q09FC8	603 aa		5.77	□□□□□ -1.49
RPH3A-223	ENST00000552352	C22orf24	Q9Y442	160 aa		5.77	□□□□□ -1.49
RPH3A-223	ENST00000552352	IGHV3-38	A0A0C4DH36	116 aa		5.76	□□□□□ -1.49
RPH3A-223	ENST00000552352	IGHV3-53	P01767	116 aa		5.76	□□□□□ -1.49
RPH3A-223	ENST00000552352	FAM19A3	Q7Z5A8	133 aa		5.76	□□□□□ -1.49
RPH3A-223	ENST00000552352	IGHV3OR16-12	A0A075B7B8	117 aa		5.76	□□□□□ -1.49
RPH3A-223	ENST00000552352		A8MTW9	85 aa		5.76	□□□□□ -1.49
RPH3A-223	ENST00000552352	SMIM1	B2RUZ4	78 aa		5.76	□□□□□ -1.49
RPH3A-223	ENST00000552352	LINC00242	Q5T6M2	205 aa		5.76	□□□□□ -1.49
RPH3A-223	ENST00000552352	DGAT2L7P	Q6IED9	249 aa		5.76	□□□□□ -1.49
RPH3A-223	ENST00000552352	MAPK1IP1L	Q8NDC0	245 aa		5.76	□□□□□ -1.49
RPH3A-223	ENST00000552352	ZNF625	Q96I27	306 aa	Predicted RBP	5.76	□□□□□ -1.49
RPH3A-223	ENST00000552352	DOPEY2	Q9Y3R5	2298 aa		5.76	□□□□□ -1.49
RPH3A-223	ENST00000552352	NACA	E9PAV3	2078 aa		5.76	□□□□□ -1.49
RPH3A-223	ENST00000552352	ZNF462	Q96JM2	2506 aa		5.75	□□□□□ -1.49
RPH3A-223	ENST00000552352	COX7C	P15954	63 aa		5.75	□□□□□ -1.49
RPH3A-223	ENST00000552352	SYNJ2BP	P57105	145 aa		5.75	□□□□□ -1.49
RPH3A-223	ENST00000552352		A0A0U1RRA0	63 aa		5.75	□□□□□ -1.49
RPH3A-223	ENST00000552352	PLA2G2A	P14555	144 aa		5.75	□□□□□ -1.49
RPH3A-223	ENST00000552352	HIST1H4A	P62805	103 aa	Known RBP	5.75	□□□□□ -1.49
RPH3A-223	ENST00000552352	C4orf3	Q8WVX3	66 aa		5.75	□□□□□ -1.49
RPH3A-223	ENST00000552352	FAM218A	Q96MZ4	157 aa		5.75	□□□□□ -1.49
RPH3A-223	ENST00000552352		A0A1B0GX51	115 aa		5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352	GAGE2A	Q6NT46	116 aa		5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352	C10orf99	Q6UWK7	81 aa		5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352	PRIMA1	Q86XR5	153 aa		5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352	CELSR1	Q9NYQ6	3014 aa		5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352		J3QKU1	62 aa		5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352	ATOX1	O00244	68 aa		5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352	PRM2	P04554	102 aa		5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352	CRYGA	P11844	174 aa		5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352	MAL	P21145	153 aa		5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352	HOXD3	P31249	432 aa	Predicted RBP	5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352	HIST2H2BC	Q6DN03	193 aa		5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352	HIST2H2BD	Q6DRA6	164 aa		5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352	C2orf48	Q96LS8	159 aa		5.74	□□□□□ -1.49
RPH3A-223	ENST00000552352	TRAV13-2	A0A0B4J235	113 aa		5.73	□□□□□ -1.49
RPH3A-223	ENST00000552352	RBMY1B	A6NDE4	496 aa	Known RBP	5.73	□□□□□ -1.49
RPH3A-223	ENST00000552352	RBMY1E	A6NEQ0	496 aa	Known RBP	5.73	□□□□□ -1.49
RPH3A-223	ENST00000552352		J3KT08	172 aa		5.73	□□□□□ -1.49
RPH3A-223	ENST00000552352	RS1	O15537	224 aa		5.73	□□□□□ -1.49
RPH3A-223	ENST00000552352	RBMY1D	P0C7P1	496 aa	Known RBP	5.73	□□□□□ -1.49
RPH3A-223	ENST00000552352	RPL28	P46779	137 aa	Known RBP	5.73	□□□□□ -1.49
RPH3A-223	ENST00000552352	C11orf72	Q8NBR9	251 aa		5.73	□□□□□ -1.49
RPH3A-223	ENST00000552352	OVOL2	Q9BRP0	275 aa		5.73	□□□□□ -1.49
RPH3A-223	ENST00000552352	SPTAN1	Q13813	2472 aa	Known RBP	5.73	□□□□□ -1.49
RPH3A-223	ENST00000552352	FLNC	Q14315	2725 aa		5.73	□□□□□ -1.49
RPH3A-223	ENST00000552352	DEFB131A	P59861	70 aa		5.73	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms