RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 IGKV3OR2-268A0A0C4DH90 116 aa3.92□□□□□ -1.78
CCDC65-204ENST00000552188 KRTAP4-8A0A0G2JLE6 195 aa3.92□□□□□ -1.78
CCDC65-204ENST00000552188 A0A1B0GW15 77 aa3.92□□□□□ -1.78
CCDC65-204ENST00000552188 LRCOL1A6NCL2 159 aa3.92□□□□□ -1.78
CCDC65-204ENST00000552188 F8W036 122 aa3.92□□□□□ -1.78
CCDC65-204ENST00000552188 PPP1R17O96001 155 aa3.92□□□□□ -1.78
CCDC65-204ENST00000552188 FCER1GP30273 86 aa3.92□□□□□ -1.78
CCDC65-204ENST00000552188 REG3AQ06141 175 aa3.92□□□□□ -1.78
CCDC65-204ENST00000552188 PNRC1Q12796 327 aaPredicted RBP3.92□□□□□ -1.78
CCDC65-204ENST00000552188 MRPL54Q6P161 138 aaKnown RBP3.92□□□□□ -1.78
CCDC65-204ENST00000552188 AMN1Q8IY45 258 aa3.92□□□□□ -1.78
CCDC65-204ENST00000552188 MRAP2Q96G30 205 aa3.92□□□□□ -1.78
CCDC65-204ENST00000552188 TMEM101Q96IK0 257 aa3.92□□□□□ -1.78
CCDC65-204ENST00000552188 TRAV8-4A0A0B4J246 113 aa3.91□□□□□ -1.78
CCDC65-204ENST00000552188 A0A1B0GUV1 79 aa3.91□□□□□ -1.78
CCDC65-204ENST00000552188 SMIM27A0A1W2PRY6 76 aa3.91□□□□□ -1.78
CCDC65-204ENST00000552188 H7C423 109 aa3.91□□□□□ -1.78
CCDC65-204ENST00000552188 MT-ND4LP03901 98 aa3.91□□□□□ -1.78
CCDC65-204ENST00000552188 RAB4AP20338 218 aa3.91□□□□□ -1.78
CCDC65-204ENST00000552188 CKS2P33552 79 aa3.91□□□□□ -1.78
CCDC65-204ENST00000552188 SMAGPQ0VAQ4 97 aa3.91□□□□□ -1.78
CCDC65-204ENST00000552188 VAMP3Q15836 100 aa3.91□□□□□ -1.78
CCDC65-204ENST00000552188 C6orf226Q5I0X4 101 aa3.91□□□□□ -1.78
CCDC65-204ENST00000552188 CLLU1Q5K131 121 aa3.91□□□□□ -1.78
CCDC65-204ENST00000552188 ENHOQ6UWT2 76 aa3.91□□□□□ -1.78
CCDC65-204ENST00000552188 DNAH11Q96DT5 4516 aa3.91□□□□□ -1.78
CCDC65-204ENST00000552188 DYNC1H1Q14204 4646 aaKnown RBP3.9□□□□□ -1.78
CCDC65-204ENST00000552188 IGLV4-60A0A075B6I1 120 aa3.9□□□□□ -1.79
CCDC65-204ENST00000552188 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.9□□□□□ -1.79
CCDC65-204ENST00000552188 TRBV6-5A0A0K0K1A5 114 aa3.9□□□□□ -1.79
CCDC65-204ENST00000552188 LOC105371267A0A1B0GV96 52 aa3.9□□□□□ -1.79
CCDC65-204ENST00000552188 IGKV2-29A2NJV5 120 aaPredicted RBP3.9□□□□□ -1.79
CCDC65-204ENST00000552188 SMKR1H3BMG3 65 aa3.9□□□□□ -1.79
CCDC65-204ENST00000552188 VCYO14598 125 aa3.9□□□□□ -1.79
CCDC65-204ENST00000552188 HBBP68871 147 aa3.9□□□□□ -1.79
CCDC65-204ENST00000552188 MRPL51Q4U2R6 128 aaKnown RBP3.9□□□□□ -1.79
CCDC65-204ENST00000552188 FAM104BQ5XKR9 115 aa3.9□□□□□ -1.79
CCDC65-204ENST00000552188 TMEM18Q96B42 140 aa3.9□□□□□ -1.79
CCDC65-204ENST00000552188 KIR2DL4Q99706 377 aa3.9□□□□□ -1.79
CCDC65-204ENST00000552188 TMEM70Q9BUB7 260 aa3.9□□□□□ -1.79
CCDC65-204ENST00000552188 TMEM242Q9NWH2 141 aa3.9□□□□□ -1.79
CCDC65-204ENST00000552188 C7orf77A4D0Y5 90 aa3.89□□□□□ -1.79
CCDC65-204ENST00000552188 LINC00862A6NCI5 91 aa3.89□□□□□ -1.79
CCDC65-204ENST00000552188 TCAPO15273 167 aa3.89□□□□□ -1.79
CCDC65-204ENST00000552188 FGF6P10767 208 aa3.89□□□□□ -1.79
CCDC65-204ENST00000552188 ZNF25P17030 456 aaPredicted RBP3.89□□□□□ -1.79
CCDC65-204ENST00000552188 KRTAP10-1P60331 282 aa3.89□□□□□ -1.79
CCDC65-204ENST00000552188 SUMO2P61956 95 aaKnown RBP3.89□□□□□ -1.79
CCDC65-204ENST00000552188 WFDC2Q14508 124 aa3.89□□□□□ -1.79
CCDC65-204ENST00000552188 ATP5L2Q7Z4Y8 100 aa3.89□□□□□ -1.79
CCDC65-204ENST00000552188 C20orf203Q8NBC4 194 aa3.89□□□□□ -1.79
CCDC65-204ENST00000552188 OR5A1Q8NGJ0 315 aa3.89□□□□□ -1.79
CCDC65-204ENST00000552188 RNF185Q96GF1 192 aa3.89□□□□□ -1.79
CCDC65-204ENST00000552188 PRR34Q9NV39 138 aa3.89□□□□□ -1.79
CCDC65-204ENST00000552188 CSDC2Q9Y534 153 aaKnown RBP3.89□□□□□ -1.79
CCDC65-204ENST00000552188 PKHD1P08F94 4074 aa3.89□□□□□ -1.79
CCDC65-204ENST00000552188 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.88□□□□□ -1.79
CCDC65-204ENST00000552188 hDV102S1A0JD36 115 aa3.88□□□□□ -1.79
CCDC65-204ENST00000552188 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
CCDC65-204ENST00000552188 GAGE12HA6NDE8 117 aa3.88□□□□□ -1.79
CCDC65-204ENST00000552188 EPM2AB3EWF7 344 aa3.88□□□□□ -1.79
CCDC65-204ENST00000552188 GAS8-AS1O95177 125 aa3.88□□□□□ -1.79
CCDC65-204ENST00000552188 PPBPP02775 128 aa3.88□□□□□ -1.79
CCDC65-204ENST00000552188 RPS10P46783 165 aaKnown RBP3.88□□□□□ -1.79
CCDC65-204ENST00000552188 POLR2KP53803 58 aaKnown RBP3.88□□□□□ -1.79
CCDC65-204ENST00000552188 SS18Q15532 418 aa3.88□□□□□ -1.79
CCDC65-204ENST00000552188 LINC01620Q4KN68 170 aa3.88□□□□□ -1.79
CCDC65-204ENST00000552188 UQCC3Q6UW78 93 aa3.88□□□□□ -1.79
CCDC65-204ENST00000552188 Q8N1X5 172 aa3.88□□□□□ -1.79
CCDC65-204ENST00000552188 C20orf78Q9BR46 151 aa3.88□□□□□ -1.79
CCDC65-204ENST00000552188 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 TRBV27A0A0K0K1C4 114 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 D6R8Y8 96 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 TSHBP01222 138 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 SMR3BP02814 79 aaPredicted RBP3.87□□□□□ -1.79
CCDC65-204ENST00000552188 ESDP10768 282 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 RAB5AP20339 215 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 S100PP25815 95 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 TMEM136Q6ZRR5 245 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 COMMD7Q86VX2 200 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 ORMDL3Q8N138 153 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 ZNF664Q8N3J9 261 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 NRACQ8N912 160 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 DPH3Q96FX2 82 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 PRELID3AQ96N28 172 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 KIAA1109Q2LD37 5005 aa3.87□□□□□ -1.79
CCDC65-204ENST00000552188 DNAH5Q8TE73 4624 aa3.86□□□□□ -1.79
CCDC65-204ENST00000552188 LOC389332A0A1B0GUA5 103 aa3.86□□□□□ -1.79
CCDC65-204ENST00000552188 A0A1B0GXF2 115 aa3.86□□□□□ -1.79
CCDC65-204ENST00000552188 TMEM218A2RU14 115 aa3.86□□□□□ -1.79
CCDC65-204ENST00000552188 PRYO14603 147 aa3.86□□□□□ -1.79
CCDC65-204ENST00000552188 PRSS1P07477 247 aa3.86□□□□□ -1.79
CCDC65-204ENST00000552188 XCL1P47992 114 aa3.86□□□□□ -1.79
CCDC65-204ENST00000552188 XGP55808 180 aa3.86□□□□□ -1.79
CCDC65-204ENST00000552188 SNRPEP62304 92 aaKnown RBP3.86□□□□□ -1.79
CCDC65-204ENST00000552188 HERV-K104P63124 156 aa3.86□□□□□ -1.79
CCDC65-204ENST00000552188 HAMPP81172 84 aa3.86□□□□□ -1.79
CCDC65-204ENST00000552188 IFITM2Q01629 132 aa3.86□□□□□ -1.79
CCDC65-204ENST00000552188 CHCHD10Q8WYQ3 142 aaPredicted RBP3.86□□□□□ -1.79
CCDC65-204ENST00000552188 SMIM2Q9BVW6 85 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms