RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 APCSP02743 223 aa6.44□□□□□ -1.38
SLC48A1-209ENST00000552003 PPBPP02775 128 aa6.44□□□□□ -1.38
SLC48A1-209ENST00000552003 MRPL51Q4U2R6 128 aaKnown RBP6.44□□□□□ -1.38
SLC48A1-209ENST00000552003 OR10J3Q5JRS4 329 aa6.44□□□□□ -1.38
SLC48A1-209ENST00000552003 SLC25A29Q8N8R3 303 aa6.44□□□□□ -1.38
SLC48A1-209ENST00000552003 RNF185Q96GF1 192 aa6.44□□□□□ -1.38
SLC48A1-209ENST00000552003 TRAV8-6A0A0B4J262 113 aa6.43□□□□□ -1.38
SLC48A1-209ENST00000552003 TRAV26-2A0A0B4J265 109 aa6.43□□□□□ -1.38
SLC48A1-209ENST00000552003 COLCA2A8K830 154 aa6.43□□□□□ -1.38
SLC48A1-209ENST00000552003 M0QY20 66 aa6.43□□□□□ -1.38
SLC48A1-209ENST00000552003 CKS2P33552 79 aa6.43□□□□□ -1.38
SLC48A1-209ENST00000552003 ORMDL3Q8N138 153 aa6.43□□□□□ -1.38
SLC48A1-209ENST00000552003 TRAPPC1Q9Y5R8 145 aa6.43□□□□□ -1.38
SLC48A1-209ENST00000552003 TRAV8-3A0A0A6YYJ7 113 aa6.42□□□□□ -1.38
SLC48A1-209ENST00000552003 D6R8Y8 96 aa6.42□□□□□ -1.38
SLC48A1-209ENST00000552003 NCR2O95944 276 aa6.42□□□□□ -1.38
SLC48A1-209ENST00000552003 RAB5AP20339 215 aa6.42□□□□□ -1.38
SLC48A1-209ENST00000552003 RPS10P46783 165 aaKnown RBP6.42□□□□□ -1.38
SLC48A1-209ENST00000552003 RPL36AP83881 106 aaKnown RBP6.42□□□□□ -1.38
SLC48A1-209ENST00000552003 FABP9Q0Z7S8 132 aa6.42□□□□□ -1.38
SLC48A1-209ENST00000552003 SH2D6Q7Z4S9 175 aa6.42□□□□□ -1.38
SLC48A1-209ENST00000552003 RPL36ALQ969Q0 106 aaKnown RBP6.42□□□□□ -1.38
SLC48A1-209ENST00000552003 NIT2Q9NQR4 276 aa6.42□□□□□ -1.38
SLC48A1-209ENST00000552003 LAMTOR2Q9Y2Q5 125 aa6.42□□□□□ -1.38
SLC48A1-209ENST00000552003 PHOX2AO14813 284 aa6.41□□□□□ -1.38
SLC48A1-209ENST00000552003 SDIM1Q6ZPB5 146 aa6.41□□□□□ -1.38
SLC48A1-209ENST00000552003 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.41□□□□□ -1.38
SLC48A1-209ENST00000552003 NEXN-AS1Q8NBZ9 246 aa6.41□□□□□ -1.38
SLC48A1-209ENST00000552003 ATP6V0E2Q8NHE4 81 aa6.41□□□□□ -1.38
SLC48A1-209ENST00000552003 PRELID3AQ96N28 172 aa6.41□□□□□ -1.38
SLC48A1-209ENST00000552003 TRBV7-3A0A075B6L6 115 aa6.4□□□□□ -1.38
SLC48A1-209ENST00000552003 TRBV6-5A0A0K0K1A5 114 aa6.4□□□□□ -1.38
SLC48A1-209ENST00000552003 GAGE12JA6NER3 117 aa6.4□□□□□ -1.38
SLC48A1-209ENST00000552003 SMKR1H3BMG3 65 aa6.4□□□□□ -1.38
SLC48A1-209ENST00000552003 GAGE1Q13065 139 aa6.4□□□□□ -1.38
SLC48A1-209ENST00000552003 GAGE4Q13068 117 aa6.4□□□□□ -1.38
SLC48A1-209ENST00000552003 GAGE5Q13069 117 aa6.4□□□□□ -1.38
SLC48A1-209ENST00000552003 CIRBPQ14011 172 aaKnown RBP6.4□□□□□ -1.38
SLC48A1-209ENST00000552003 GAGE13Q4V321 117 aa6.4□□□□□ -1.38
SLC48A1-209ENST00000552003 NRACQ8N912 160 aa6.4□□□□□ -1.38
SLC48A1-209ENST00000552003 RPL39LQ96EH5 51 aaKnown RBP6.4□□□□□ -1.38
SLC48A1-209ENST00000552003 ST20Q9HBF5 79 aa6.4□□□□□ -1.38
SLC48A1-209ENST00000552003 NPYP01303 97 aa6.39□□□□□ -1.39
SLC48A1-209ENST00000552003 LINC00694P0DN24 101 aa6.39□□□□□ -1.39
SLC48A1-209ENST00000552003 UBE2D3P61077 147 aa6.39□□□□□ -1.39
SLC48A1-209ENST00000552003 UBE2D2P62837 147 aa6.39□□□□□ -1.39
SLC48A1-209ENST00000552003 KIAA1644Q3SXP7 199 aa6.39□□□□□ -1.39
SLC48A1-209ENST00000552003 DGAT2L7PQ6IED9 249 aa6.39□□□□□ -1.39
SLC48A1-209ENST00000552003 C9orf163Q8N9P6 203 aa6.39□□□□□ -1.39
SLC48A1-209ENST00000552003 C20orf78Q9BR46 151 aa6.39□□□□□ -1.39
SLC48A1-209ENST00000552003 IGKV2D-24A0A075B6R9 120 aa6.38□□□□□ -1.39
SLC48A1-209ENST00000552003 TRGC2P03986 189 aa6.38□□□□□ -1.39
SLC48A1-209ENST00000552003 SUMO2P61956 95 aaKnown RBP6.38□□□□□ -1.39
SLC48A1-209ENST00000552003 RPL32P62910 135 aaKnown RBP6.38□□□□□ -1.39
SLC48A1-209ENST00000552003 TMEM97Q5BJF2 176 aa6.38□□□□□ -1.39
SLC48A1-209ENST00000552003 ALKBH7Q9BT30 221 aaPredicted RBP6.38□□□□□ -1.39
SLC48A1-209ENST00000552003 MAP1LC3AQ9H492 121 aa6.38□□□□□ -1.39
SLC48A1-209ENST00000552003 A0A087WYN8 130 aa6.37□□□□□ -1.39
SLC48A1-209ENST00000552003 SDHAF1A6NFY7 115 aa6.37□□□□□ -1.39
SLC48A1-209ENST00000552003 PRSS1P07477 247 aa6.37□□□□□ -1.39
SLC48A1-209ENST00000552003 CHTF8P0CG12 524 aa6.37□□□□□ -1.39
SLC48A1-209ENST00000552003 PMCHP20382 165 aa6.37□□□□□ -1.39
SLC48A1-209ENST00000552003 SMIM2Q9BVW6 85 aa6.37□□□□□ -1.39
SLC48A1-209ENST00000552003 Q9UF83 564 aa6.37□□□□□ -1.39
SLC48A1-209ENST00000552003 COX11Q9Y6N1 276 aa6.37□□□□□ -1.39
SLC48A1-209ENST00000552003 TRBV27A0A0K0K1C4 114 aa6.36□□□□□ -1.39
SLC48A1-209ENST00000552003 I3L3M4 83 aa6.36□□□□□ -1.39
SLC48A1-209ENST00000552003 VCYO14598 125 aa6.36□□□□□ -1.39
SLC48A1-209ENST00000552003 TCAPO15273 167 aa6.36□□□□□ -1.39
SLC48A1-209ENST00000552003 PRR3P79522 188 aaKnown RBP6.36□□□□□ -1.39
SLC48A1-209ENST00000552003 KIR2DL4Q99706 377 aa6.36□□□□□ -1.39
SLC48A1-209ENST00000552003 GTSF1LQ9H1H1 148 aa6.36□□□□□ -1.39
SLC48A1-209ENST00000552003 POLR2KP53803 58 aaKnown RBP6.35□□□□□ -1.39
SLC48A1-209ENST00000552003 COTL1Q14019 142 aa6.35□□□□□ -1.39
SLC48A1-209ENST00000552003 Q8N8P6 123 aa6.35□□□□□ -1.39
SLC48A1-209ENST00000552003 NXT2Q9NPJ8 142 aaKnown RBP6.35□□□□□ -1.39
SLC48A1-209ENST00000552003 LOC389332A0A1B0GUA5 103 aa6.34□□□□□ -1.39
SLC48A1-209ENST00000552003 C1orf196B1AJZ1 125 aa6.34□□□□□ -1.39
SLC48A1-209ENST00000552003 K7EMI3 77 aa6.34□□□□□ -1.39
SLC48A1-209ENST00000552003 FCER1GP30273 86 aa6.34□□□□□ -1.39
SLC48A1-209ENST00000552003 SRSF9Q13242 221 aaKnown RBP eCLIP6.34□□□□□ -1.39
SLC48A1-209ENST00000552003 PRSS3P2Q8NHM4 247 aa6.34□□□□□ -1.39
SLC48A1-209ENST00000552003 C18orf32Q8TCD1 76 aa6.34□□□□□ -1.39
SLC48A1-209ENST00000552003 TRBV25-1A0A075B6N4 114 aa6.33□□□□□ -1.4
SLC48A1-209ENST00000552003 IGHV1-24A0A0C4DH33 117 aa6.33□□□□□ -1.4
SLC48A1-209ENST00000552003 GAGE10A6NGK3 116 aa6.33□□□□□ -1.4
SLC48A1-209ENST00000552003 KRTAP9-7A8MTY7 169 aa6.33□□□□□ -1.4
SLC48A1-209ENST00000552003 USP17L23D6RBM5 183 aa6.33□□□□□ -1.4
SLC48A1-209ENST00000552003 TSHBP01222 138 aa6.33□□□□□ -1.4
SLC48A1-209ENST00000552003 AMTP48728 403 aa6.33□□□□□ -1.4
SLC48A1-209ENST00000552003 RAB5BP61020 215 aa6.33□□□□□ -1.4
SLC48A1-209ENST00000552003 PET117Q6UWS5 81 aa6.33□□□□□ -1.4
SLC48A1-209ENST00000552003 FA2HQ7L5A8 372 aa6.33□□□□□ -1.4
SLC48A1-209ENST00000552003 KLK12Q9UKR0 248 aa6.33□□□□□ -1.4
SLC48A1-209ENST00000552003 TRBV6-8A0A0A6YYG3 113 aa6.32□□□□□ -1.4
SLC48A1-209ENST00000552003 IFI27P40305 119 aaPredicted RBP6.32□□□□□ -1.4
SLC48A1-209ENST00000552003 PKIAP61925 76 aa6.32□□□□□ -1.4
SLC48A1-209ENST00000552003 Q0VG73 95 aa6.32□□□□□ -1.4
SLC48A1-209ENST00000552003 IQCJQ1A5X6 159 aa6.32□□□□□ -1.4
SLC48A1-209ENST00000552003 ORMDL2Q53FV1 153 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms