RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CDC42SE2Q9NRR3 84 aa9.07□□□□□ -0.96
CACNB3-220ENST00000551716 NDUFA13Q9P0J0 144 aa9.07□□□□□ -0.96
CACNB3-220ENST00000551716 SDHAF1A6NFY7 115 aa9.06□□□□□ -0.96
CACNB3-220ENST00000551716 F8WDY8 70 aa9.06□□□□□ -0.96
CACNB3-220ENST00000551716 RPL35P42766 123 aaKnown RBP9.06□□□□□ -0.96
CACNB3-220ENST00000551716 TWIST1Q15672 202 aa9.06□□□□□ -0.96
CACNB3-220ENST00000551716 MRAP2Q96G30 205 aa9.06□□□□□ -0.96
CACNB3-220ENST00000551716 OPRPNQ99935 248 aaPredicted RBP9.06□□□□□ -0.96
CACNB3-220ENST00000551716 CDIP1Q9H305 208 aa9.06□□□□□ -0.96
CACNB3-220ENST00000551716 MRPL52Q86TS9 123 aaKnown RBP9.05□□□□□ -0.96
CACNB3-220ENST00000551716 KRTAP11-1Q8IUC1 163 aa9.05□□□□□ -0.96
CACNB3-220ENST00000551716 G3V3Q6 166 aa9.04□□□□□ -0.96
CACNB3-220ENST00000551716 DEFA1P59665 94 aa9.04□□□□□ -0.96
CACNB3-220ENST00000551716 UBE2BP63146 152 aa9.04□□□□□ -0.96
CACNB3-220ENST00000551716 SMIM15Q7Z3B0 74 aa9.04□□□□□ -0.96
CACNB3-220ENST00000551716 SFT2D1Q8WV19 159 aa9.04□□□□□ -0.96
CACNB3-220ENST00000551716 MRPL35Q9NZE8 188 aaKnown RBP9.04□□□□□ -0.96
CACNB3-220ENST00000551716 RPL39LQ96EH5 51 aaKnown RBP9.03□□□□□ -0.96
CACNB3-220ENST00000551716 SMIM12Q96EX1 92 aa9.03□□□□□ -0.96
CACNB3-220ENST00000551716 IFITM3Q01628 133 aa9.02□□□□□ -0.97
CACNB3-220ENST00000551716 TMEM241Q24JQ0 296 aa9.02□□□□□ -0.97
CACNB3-220ENST00000551716 MBD3L1Q8WWY6 194 aa9.02□□□□□ -0.97
CACNB3-220ENST00000551716 CNFNQ9BYD5 112 aa9.02□□□□□ -0.97
CACNB3-220ENST00000551716 RPP21Q9H633 154 aaKnown RBP9.02□□□□□ -0.97
CACNB3-220ENST00000551716 BIN3Q9NQY0 253 aa9.02□□□□□ -0.97
CACNB3-220ENST00000551716 FAM168BA1KXE4 195 aa9.01□□□□□ -0.97
CACNB3-220ENST00000551716 ZNF861PO60384 105 aa9.01□□□□□ -0.97
CACNB3-220ENST00000551716 TLX1NBP0CAT3 122 aa9.01□□□□□ -0.97
CACNB3-220ENST00000551716 CTRLP40313 264 aa9.01□□□□□ -0.97
CACNB3-220ENST00000551716 LINC01547P58512 204 aaPredicted RBP9.01□□□□□ -0.97
CACNB3-220ENST00000551716 SMAGPQ0VAQ4 97 aa9.01□□□□□ -0.97
CACNB3-220ENST00000551716 TPRXLQ17RH7 258 aa9.01□□□□□ -0.97
CACNB3-220ENST00000551716 FAM19A5Q7Z5A7 132 aaPredicted RBP9.01□□□□□ -0.97
CACNB3-220ENST00000551716 KCNRGQ8N5I3 272 aa9.01□□□□□ -0.97
CACNB3-220ENST00000551716 OR10D4PQ8NGN7 298 aa9.01□□□□□ -0.97
CACNB3-220ENST00000551716 TRBV6-5A0A0K0K1A5 114 aa9□□□□□ -0.97
CACNB3-220ENST00000551716 SPAG11BQ08648 103 aa9□□□□□ -0.97
CACNB3-220ENST00000551716 Q5BKY6 102 aa9□□□□□ -0.97
CACNB3-220ENST00000551716 CENPWQ5EE01 88 aa9□□□□□ -0.97
CACNB3-220ENST00000551716 MUC17Q685J3 4493 aa8.99□□□□□ -0.97
CACNB3-220ENST00000551716 TYMSOSQ8TAI1 123 aa8.99□□□□□ -0.97
CACNB3-220ENST00000551716 ALG5Q9Y673 324 aa8.99□□□□□ -0.97
CACNB3-220ENST00000551716 FXYD6-FXYD2A0A087WZ82 144 aa8.98□□□□□ -0.97
CACNB3-220ENST00000551716 UMAD1C9J7I0 102 aa8.98□□□□□ -0.97
CACNB3-220ENST00000551716 M0QXV9 152 aa8.98□□□□□ -0.97
CACNB3-220ENST00000551716 NDUFA1O15239 70 aa8.98□□□□□ -0.97
CACNB3-220ENST00000551716 TSHBP01222 138 aa8.98□□□□□ -0.97
CACNB3-220ENST00000551716 CRYGAP11844 174 aa8.98□□□□□ -0.97
CACNB3-220ENST00000551716 GNG4P50150 75 aa8.98□□□□□ -0.97
CACNB3-220ENST00000551716 C5orf38Q86SI9 138 aa8.98□□□□□ -0.97
CACNB3-220ENST00000551716 C11orf52Q96A22 123 aa8.98□□□□□ -0.97
CACNB3-220ENST00000551716 ST20Q9HBF5 79 aa8.98□□□□□ -0.97
CACNB3-220ENST00000551716 CSDC2Q9Y534 153 aaKnown RBP8.98□□□□□ -0.97
CACNB3-220ENST00000551716 C7orf77A4D0Y5 90 aa8.97□□□□□ -0.97
CACNB3-220ENST00000551716 GIPP09681 153 aaPredicted RBP8.97□□□□□ -0.97
CACNB3-220ENST00000551716 FAM213BQ8TBF2 198 aa8.97□□□□□ -0.97
CACNB3-220ENST00000551716 TRAV13-1A0A0B4J241 112 aa8.96□□□□□ -0.98
CACNB3-220ENST00000551716 A0A1B0GV50 99 aa8.96□□□□□ -0.98
CACNB3-220ENST00000551716 CCL20P78556 96 aa8.96□□□□□ -0.98
CACNB3-220ENST00000551716 GAGE2EQ4V326 116 aa8.96□□□□□ -0.98
CACNB3-220ENST00000551716 TMEM242Q9NWH2 141 aa8.96□□□□□ -0.98
CACNB3-220ENST00000551716 GAGE2DQ9UEU5 116 aa8.96□□□□□ -0.98
CACNB3-220ENST00000551716 IGLV7-46A0A075B6I9 117 aa8.95□□□□□ -0.98
CACNB3-220ENST00000551716 SMDT1Q9H4I9 107 aa8.95□□□□□ -0.98
CACNB3-220ENST00000551716 CYTL1Q9NRR1 136 aa8.95□□□□□ -0.98
CACNB3-220ENST00000551716 NUPR1O60356 82 aa8.94□□□□□ -0.98
CACNB3-220ENST00000551716 H2AFB1P0C5Y9 115 aa8.94□□□□□ -0.98
CACNB3-220ENST00000551716 ORAOV1Q8WV07 137 aa8.94□□□□□ -0.98
CACNB3-220ENST00000551716 MANBALQ9NQG1 85 aa8.94□□□□□ -0.98
CACNB3-220ENST00000551716 A0A087X002 238 aa8.93□□□□□ -0.98
CACNB3-220ENST00000551716 TRBV27A0A0K0K1C4 114 aa8.93□□□□□ -0.98
CACNB3-220ENST00000551716 RAB19A4D1S5 217 aa8.93□□□□□ -0.98
CACNB3-220ENST00000551716 CTAG1AP78358 180 aa8.93□□□□□ -0.98
CACNB3-220ENST00000551716 KRTAP7-1Q8IUC3 87 aa8.93□□□□□ -0.98
CACNB3-220ENST00000551716 NUDT10Q8NFP7 164 aa8.93□□□□□ -0.98
CACNB3-220ENST00000551716 NUDT11Q96G61 164 aa8.93□□□□□ -0.98
CACNB3-220ENST00000551716 POLR2KP53803 58 aaKnown RBP8.92□□□□□ -0.98
CACNB3-220ENST00000551716 RETNLBQ9BQ08 111 aa8.92□□□□□ -0.98
CACNB3-220ENST00000551716 FCER1GP30273 86 aa8.91□□□□□ -0.98
CACNB3-220ENST00000551716 RPL28P46779 137 aaKnown RBP8.91□□□□□ -0.98
CACNB3-220ENST00000551716 FOXA3P55318 350 aaPredicted RBP8.91□□□□□ -0.98
CACNB3-220ENST00000551716 C10orf25Q5T742 122 aa8.91□□□□□ -0.98
CACNB3-220ENST00000551716 UNQ6190/PRO20217Q6UXQ8 127 aa8.91□□□□□ -0.98
CACNB3-220ENST00000551716 RNASE7Q9H1E1 156 aaKnown RBP8.91□□□□□ -0.98
CACNB3-220ENST00000551716 C6orf48Q9UBA6 75 aa8.91□□□□□ -0.98
CACNB3-220ENST00000551716 UBE2D4Q9Y2X8 147 aa8.91□□□□□ -0.98
CACNB3-220ENST00000551716 VCYO14598 125 aa8.9□□□□□ -0.98
CACNB3-220ENST00000551716 LINC00173Q6ZV60 143 aa8.9□□□□□ -0.98
CACNB3-220ENST00000551716 GNG13Q9P2W3 67 aa8.9□□□□□ -0.98
CACNB3-220ENST00000551716 PDE6DO43924 150 aa8.89□□□□□ -0.99
CACNB3-220ENST00000551716 LBHQ53QV2 105 aaPredicted RBP8.89□□□□□ -0.99
CACNB3-220ENST00000551716 RNASE13Q5GAN3 156 aaKnown RBP8.89□□□□□ -0.99
CACNB3-220ENST00000551716 TMEM18Q96B42 140 aa8.89□□□□□ -0.99
CACNB3-220ENST00000551716 TRBV30A0A0K0K1B3 111 aa8.88□□□□□ -0.99
CACNB3-220ENST00000551716 NDUFC2-KCTD14E9PQ53 114 aa8.88□□□□□ -0.99
CACNB3-220ENST00000551716 ARPC5O15511 151 aa8.88□□□□□ -0.99
CACNB3-220ENST00000551716 LINC00304Q8N9R0 145 aa8.88□□□□□ -0.99
CACNB3-220ENST00000551716 TIMM21Q9BVV7 248 aa8.88□□□□□ -0.99
CACNB3-220ENST00000551716 CTDSP1Q9GZU7 261 aa8.88□□□□□ -0.99
CACNB3-220ENST00000551716 IGHV3OR16-9A0A0B4J2B5 98 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms