RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 KRTAP26-1Q6PEX3 210 aa9.05□□□□□ -0.96
TROAP-213ENST00000550709 MRPL52Q86TS9 123 aaKnown RBP9.05□□□□□ -0.96
TROAP-213ENST00000550709 MAP1LC3AQ9H492 121 aa9.05□□□□□ -0.96
TROAP-213ENST00000550709 LRP1BQ9NZR2 4599 aa9.04□□□□□ -0.96
TROAP-213ENST00000550709 TGIF2-C20orf24A0A0A6YYL0 155 aa9.04□□□□□ -0.96
TROAP-213ENST00000550709 USP17L23D6RBM5 183 aa9.04□□□□□ -0.96
TROAP-213ENST00000550709 RPL39P62891 51 aaKnown RBP9.04□□□□□ -0.96
TROAP-213ENST00000550709 LAMTOR2Q9Y2Q5 125 aa9.04□□□□□ -0.96
TROAP-213ENST00000550709 KIAA1109Q2LD37 5005 aa9.04□□□□□ -0.96
TROAP-213ENST00000550709 GAGE12HA6NDE8 117 aa9.03□□□□□ -0.96
TROAP-213ENST00000550709 GCSHP23434 173 aa9.03□□□□□ -0.96
TROAP-213ENST00000550709 KRTAP10-1P60331 282 aa9.03□□□□□ -0.96
TROAP-213ENST00000550709 RNASE13Q5GAN3 156 aaKnown RBP9.03□□□□□ -0.96
TROAP-213ENST00000550709 ZNF664Q8N3J9 261 aa9.03□□□□□ -0.96
TROAP-213ENST00000550709 NTN5Q8WTR8 489 aaPredicted RBP9.03□□□□□ -0.96
TROAP-213ENST00000550709 CHCHD10Q8WYQ3 142 aaPredicted RBP9.03□□□□□ -0.96
TROAP-213ENST00000550709 TMEM18Q96B42 140 aa9.03□□□□□ -0.96
TROAP-213ENST00000550709 GNB1LQ9BYB4 327 aa9.03□□□□□ -0.96
TROAP-213ENST00000550709 CDC42SE2Q9NRR3 84 aa9.03□□□□□ -0.96
TROAP-213ENST00000550709 UBE2D4Q9Y2X8 147 aa9.03□□□□□ -0.96
TROAP-213ENST00000550709 SMAGPQ0VAQ4 97 aa9.02□□□□□ -0.97
TROAP-213ENST00000550709 FABP9Q0Z7S8 132 aa9.02□□□□□ -0.97
TROAP-213ENST00000550709 DNAH5Q8TE73 4624 aa9.01□□□□□ -0.97
TROAP-213ENST00000550709 LINC00959A0A1B0GUT2 108 aa9.01□□□□□ -0.97
TROAP-213ENST00000550709 PRSS47A8MTI9 375 aa9.01□□□□□ -0.97
TROAP-213ENST00000550709 XCL1P47992 114 aa9.01□□□□□ -0.97
TROAP-213ENST00000550709 C14orf177Q52M58 125 aa9.01□□□□□ -0.97
TROAP-213ENST00000550709 Q8N8P6 123 aa9.01□□□□□ -0.97
TROAP-213ENST00000550709 MRPL18Q9H0U6 180 aaKnown RBP9.01□□□□□ -0.97
TROAP-213ENST00000550709 PRSS1P07477 247 aa9□□□□□ -0.97
TROAP-213ENST00000550709 IFI27P40305 119 aaPredicted RBP9□□□□□ -0.97
TROAP-213ENST00000550709 COX19Q49B96 90 aa9□□□□□ -0.97
TROAP-213ENST00000550709 LINC01620Q4KN68 170 aa9□□□□□ -0.97
TROAP-213ENST00000550709 Q6ZUT4 128 aa9□□□□□ -0.97
TROAP-213ENST00000550709 OPRPNQ99935 248 aaPredicted RBP9□□□□□ -0.97
TROAP-213ENST00000550709 TRAV13-1A0A0B4J241 112 aa8.99□□□□□ -0.97
TROAP-213ENST00000550709 CCL25O15444 150 aa8.99□□□□□ -0.97
TROAP-213ENST00000550709 MT-ND6P03923 174 aa8.99□□□□□ -0.97
TROAP-213ENST00000550709 SS18Q15532 418 aa8.99□□□□□ -0.97
TROAP-213ENST00000550709 TIMM21Q9BVV7 248 aa8.99□□□□□ -0.97
TROAP-213ENST00000550709 NXT2Q9NPJ8 142 aaKnown RBP8.99□□□□□ -0.97
TROAP-213ENST00000550709 SPANXA1Q9NS26 97 aa8.99□□□□□ -0.97
TROAP-213ENST00000550709 CSDC2Q9Y534 153 aaKnown RBP8.99□□□□□ -0.97
TROAP-213ENST00000550709 HERC2O95714 4834 aa8.99□□□□□ -0.97
TROAP-213ENST00000550709 ALKBH7Q9BT30 221 aaPredicted RBP8.98□□□□□ -0.97
TROAP-213ENST00000550709 TRAPPC1Q9Y5R8 145 aa8.98□□□□□ -0.97
TROAP-213ENST00000550709 hDV102S1A0JD36 115 aa8.97□□□□□ -0.97
TROAP-213ENST00000550709 CDK2AP2O75956 126 aa8.97□□□□□ -0.97
TROAP-213ENST00000550709 FOXI1Q12951 378 aa8.97□□□□□ -0.97
TROAP-213ENST00000550709 CBLN2Q8IUK8 224 aa8.97□□□□□ -0.97
TROAP-213ENST00000550709 PRSS3P2Q8NHM4 247 aa8.97□□□□□ -0.97
TROAP-213ENST00000550709 RYR1P21817 5038 aa8.97□□□□□ -0.97
TROAP-213ENST00000550709 ORMDL2Q53FV1 153 aa8.96□□□□□ -0.98
TROAP-213ENST00000550709 FAM104AQ969W3 186 aa8.96□□□□□ -0.98
TROAP-213ENST00000550709 C1orf196B1AJZ1 125 aa8.95□□□□□ -0.98
TROAP-213ENST00000550709 HAMPP81172 84 aa8.95□□□□□ -0.98
TROAP-213ENST00000550709 HIGD2BQ4VC39 106 aa8.95□□□□□ -0.98
TROAP-213ENST00000550709 CFAP161Q6P656 301 aa8.95□□□□□ -0.98
TROAP-213ENST00000550709 C2orf66Q6UXQ4 117 aa8.95□□□□□ -0.98
TROAP-213ENST00000550709 CYSLTR1Q9Y271 337 aa8.95□□□□□ -0.98
TROAP-213ENST00000550709 IFITM10A6NMD0 228 aa8.94□□□□□ -0.98
TROAP-213ENST00000550709 MRPS36P82909 103 aaKnown RBP8.94□□□□□ -0.98
TROAP-213ENST00000550709 CD164L2Q6UWJ8 174 aa8.94□□□□□ -0.98
TROAP-213ENST00000550709 C15orf56Q8N910 161 aa8.94□□□□□ -0.98
TROAP-213ENST00000550709 YPEL4Q96NS1 127 aa8.94□□□□□ -0.98
TROAP-213ENST00000550709 SMCO4Q9NRQ5 59 aa8.94□□□□□ -0.98
TROAP-213ENST00000550709 AP5S1Q9NUS5 200 aa8.94□□□□□ -0.98
TROAP-213ENST00000550709 FAM30AQ9NZY2 134 aa8.94□□□□□ -0.98
TROAP-213ENST00000550709 APOBP04114 4563 aaKnown RBP8.93□□□□□ -0.98
TROAP-213ENST00000550709 IGLV4-3A0A075B6K6 122 aa8.93□□□□□ -0.98
TROAP-213ENST00000550709 K7EMI3 77 aa8.93□□□□□ -0.98
TROAP-213ENST00000550709 FA2HQ7L5A8 372 aa8.93□□□□□ -0.98
TROAP-213ENST00000550709 HSPG2P98160 4391 aa8.93□□□□□ -0.98
TROAP-213ENST00000550709 COX7A2LO14548 114 aa8.92□□□□□ -0.98
TROAP-213ENST00000550709 XGP55808 180 aa8.92□□□□□ -0.98
TROAP-213ENST00000550709 ZC2HC1BQ5TFG8 222 aa8.92□□□□□ -0.98
TROAP-213ENST00000550709 C5orf38Q86SI9 138 aa8.92□□□□□ -0.98
TROAP-213ENST00000550709 TMEM141Q96I45 108 aa8.92□□□□□ -0.98
TROAP-213ENST00000550709 PYGO1Q9Y3Y4 419 aa8.92□□□□□ -0.98
TROAP-213ENST00000550709 SLPIP03973 132 aa8.91□□□□□ -0.98
TROAP-213ENST00000550709 MALP21145 153 aa8.91□□□□□ -0.98
TROAP-213ENST00000550709 LINC00526Q96FQ7 95 aa8.91□□□□□ -0.98
TROAP-213ENST00000550709 IGHV1-58A0A0C4DH39 117 aa8.9□□□□□ -0.98
TROAP-213ENST00000550709 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
TROAP-213ENST00000550709 G0S2P27469 103 aa8.9□□□□□ -0.98
TROAP-213ENST00000550709 Q6ZN92 141 aa8.9□□□□□ -0.98
TROAP-213ENST00000550709 TEX43Q6ZNM6 134 aa8.9□□□□□ -0.98
TROAP-213ENST00000550709 TOMM6Q96B49 74 aa8.9□□□□□ -0.98
TROAP-213ENST00000550709 VCX2Q9H322 139 aa8.9□□□□□ -0.98
TROAP-213ENST00000550709 CNBPP62633 177 aaKnown RBP8.89□□□□□ -0.99
TROAP-213ENST00000550709 C18orf32Q8TCD1 76 aa8.89□□□□□ -0.99
TROAP-213ENST00000550709 SCGB3A1Q96QR1 104 aa8.89□□□□□ -0.99
TROAP-213ENST00000550709 GVQW2A0A096LPI5 108 aaPredicted RBP8.88□□□□□ -0.99
TROAP-213ENST00000550709 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.88□□□□□ -0.99
TROAP-213ENST00000550709 LINC01546A6NGU7 62 aa8.88□□□□□ -0.99
TROAP-213ENST00000550709 C9orf163Q8N9P6 203 aa8.88□□□□□ -0.99
TROAP-213ENST00000550709 C2orf88Q9BSF0 95 aa8.88□□□□□ -0.99
TROAP-213ENST00000550709 ZNF561-AS1K7EIQ3 104 aa8.87□□□□□ -0.99
TROAP-213ENST00000550709 SMR3BP02814 79 aaPredicted RBP8.87□□□□□ -0.99
TROAP-213ENST00000550709 LINC00173Q6ZV60 143 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms