RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 PPIBP23284 216 aaKnown RBP2.15□□□□□ -2.07
LIMA1-205ENST00000550592 CRYBB3P26998 211 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 PSMB8P28062 276 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 BLVRBP30043 206 aaPredicted RBP2.15□□□□□ -2.07
LIMA1-205ENST00000550592 FAUP35544 74 aaKnown RBP2.15□□□□□ -2.07
LIMA1-205ENST00000550592 ZNF93P35789 620 aaPredicted RBP2.15□□□□□ -2.07
LIMA1-205ENST00000550592 RBM11P57052 281 aaKnown RBP2.15□□□□□ -2.07
LIMA1-205ENST00000550592 SEC11AP67812 179 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 PSG9Q00887 426 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 CATR1Q13166 79 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 ELOBQ15370 118 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 DEFB135Q30KP9 77 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 TDRG1Q3Y452 100 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 LYRM7Q5U5X0 104 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 FOXI2Q6ZQN5 318 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 GOLT1AQ6ZVE7 132 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 MSRB3Q8IXL7 192 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 C5orf56Q8N8D9 126 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 VSTM2AQ8TAG5 236 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 MYOZ3Q8TDC0 251 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 S100A16Q96FQ6 103 aaKnown RBP2.15□□□□□ -2.07
LIMA1-205ENST00000550592 PMCHL2Q9BQD1 86 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 SLC25A21Q9BQT8 299 aaPredicted RBP2.15□□□□□ -2.07
LIMA1-205ENST00000550592 WFDC6Q9BQY6 131 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 PRADC1Q9BSG0 188 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 WDR61Q9GZS3 305 aaKnown RBP2.15□□□□□ -2.07
LIMA1-205ENST00000550592 ST20Q9HBF5 79 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 NPVFQ9HCQ7 196 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 IDI2-AS1Q9NZ38 188 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 WASHC3Q9Y3C0 194 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 FIS1Q9Y3D6 152 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 TRAV5A0A0B4J249 113 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 A0A1B0GW64 132 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 IRGMA1A4Y4 181 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 OR4C45A6NMZ5 311 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 FNDC10F2Z333 226 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 H3BRM9 83 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 GEMIN2O14893 280 aaKnown RBP2.14□□□□□ -2.07
LIMA1-205ENST00000550592 TAX1BP3O14907 124 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 HYPMO75409 117 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 SCTP09683 121 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 ZNF728P0DKX0 622 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 PSMB3P49720 205 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 POLR2JP52435 117 aaKnown RBP2.14□□□□□ -2.07
LIMA1-205ENST00000550592 C4orf26Q17RF5 130 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 GLYATL3Q5SZD4 288 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 AADACL3Q5VUY0 350 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 DPPA3Q6W0C5 159 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 ZNF826PQ6ZT77 177 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 GAFA1Q96PS6 74 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 RNASE7Q9H1E1 156 aaKnown RBP2.14□□□□□ -2.07
LIMA1-205ENST00000550592 C11orf68Q9H3H3 251 aaKnown RBP2.14□□□□□ -2.07
LIMA1-205ENST00000550592 LAMTOR3Q9UHA4 124 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 RABAC1Q9UI14 185 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 PKIGQ9Y2B9 76 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 POLR1DQ9Y2S0 133 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 MED31Q9Y3C7 131 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 DSCAML1Q8TD84 2053 aa2.14□□□□□ -2.07
LIMA1-205ENST00000550592 TRGV10A0A0A0MS01 117 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 NBDYA0A0U1RRE5 68 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 ODAMA1E959 279 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 OR2T8A6NH00 312 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 C17orf98A8MV24 154 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 GSTZ1O43708 216 aaPredicted RBP2.13□□□□□ -2.07
LIMA1-205ENST00000550592 SNCGO76070 127 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 DPM2O94777 84 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 SFT2D2O95562 160 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 LGALS1P09382 135 aaKnown RBP2.13□□□□□ -2.07
LIMA1-205ENST00000550592 LINC00694P0DN24 101 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 CCL3L1P16619 93 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 SRIP30626 198 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 REG1BP48304 166 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 FAM27BQ5VT28 67 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 SFXN4Q6P4A7 337 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 Q6Q795 121 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 LCN15Q6UWW0 184 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 SDIM1Q6ZPB5 146 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 C10orf126Q8N4M7 172 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 LINC00471Q8N535 108 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 TMEM75Q8N9X5 138 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 OR5D14Q8NGL3 314 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 OR4C16Q8NGL9 310 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 OR10AG1Q8NH19 301 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 OR51H1Q8NH63 302 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 GNPNAT1Q96EK6 184 aaPredicted RBP2.13□□□□□ -2.07
LIMA1-205ENST00000550592 WFDC10AQ9H1F0 79 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 TMEM133Q9H2Q1 129 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 RPRMQ9NS64 109 aa2.13□□□□□ -2.07
LIMA1-205ENST00000550592 LRP1Q07954 4544 aaKnown RBP2.12□□□□□ -2.07
LIMA1-205ENST00000550592 DEFB131BA0A096LNP1 70 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 OOSP1A8MZH6 123 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 CCDC179H3BU77 68 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 GABARAPH6UMI1 98 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 NDUFB2O95178 105 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 RBP4P02753 201 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 MT-ND6P03923 174 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 REG1AP05451 166 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 CXCL1P09341 107 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 IGLC6P0CF74 106 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 PIPP12273 146 aaPredicted RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms