RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 FAM19A3Q7Z5A8 133 aa9.25□□□□□ -0.93
CALCOCO1-217ENST00000549935 SMIM20Q8N5G0 67 aa9.25□□□□□ -0.93
CALCOCO1-217ENST00000549935 LINC00308Q8TCZ7 52 aa9.25□□□□□ -0.93
CALCOCO1-217ENST00000549935 CDKN2A-AS1Q9UH64 79 aa9.25□□□□□ -0.93
CALCOCO1-217ENST00000549935 KNCNA6PVL3 124 aa9.25□□□□□ -0.93
CALCOCO1-217ENST00000549935 TRACP01848 142 aa9.25□□□□□ -0.93
CALCOCO1-217ENST00000549935 DSCR9P59020 149 aa9.25□□□□□ -0.93
CALCOCO1-217ENST00000549935 NPC2P61916 151 aa9.25□□□□□ -0.93
CALCOCO1-217ENST00000549935 LINC00643Q86TS7 51 aa9.25□□□□□ -0.93
CALCOCO1-217ENST00000549935 LINC01587Q99440 93 aa9.25□□□□□ -0.93
CALCOCO1-217ENST00000549935 CHCHD5Q9BSY4 110 aa9.25□□□□□ -0.93
CALCOCO1-217ENST00000549935 FBN2P35556 2912 aa9.24□□□□□ -0.93
CALCOCO1-217ENST00000549935 LINC00467Q9BRT7 94 aa9.24□□□□□ -0.93
CALCOCO1-217ENST00000549935 VPREB3Q9UKI3 123 aa9.24□□□□□ -0.93
CALCOCO1-217ENST00000549935 IGHV3-53P01767 116 aa9.23□□□□□ -0.93
CALCOCO1-217ENST00000549935 PRM2P04554 102 aa9.23□□□□□ -0.93
CALCOCO1-217ENST00000549935 ATP5G1P05496 136 aa9.23□□□□□ -0.93
CALCOCO1-217ENST00000549935 DEFB136Q30KP8 78 aa9.23□□□□□ -0.93
CALCOCO1-217ENST00000549935 ACACBO00763 2458 aa9.23□□□□□ -0.93
CALCOCO1-217ENST00000549935 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.23□□□□□ -0.93
CALCOCO1-217ENST00000549935 IGKV2-29A2NJV5 120 aaPredicted RBP9.23□□□□□ -0.93
CALCOCO1-217ENST00000549935 HERVK_113P63121 156 aa9.23□□□□□ -0.93
CALCOCO1-217ENST00000549935 HERV-K104P63124 156 aa9.23□□□□□ -0.93
CALCOCO1-217ENST00000549935 ZNF415Q09FC8 603 aa9.23□□□□□ -0.93
CALCOCO1-217ENST00000549935 BEAN1Q3B7T3 259 aa9.23□□□□□ -0.93
CALCOCO1-217ENST00000549935 Q6ZSN1 163 aa9.23□□□□□ -0.93
CALCOCO1-217ENST00000549935 ZNF702PQ9H963 129 aa9.23□□□□□ -0.93
CALCOCO1-217ENST00000549935 A0A096LNT2 108 aa9.22□□□□□ -0.93
CALCOCO1-217ENST00000549935 SLURP1P55000 103 aa9.22□□□□□ -0.93
CALCOCO1-217ENST00000549935 FAM222AQ5U5X8 452 aa9.22□□□□□ -0.93
CALCOCO1-217ENST00000549935 C18orf65Q6ZTR6 163 aa9.22□□□□□ -0.93
CALCOCO1-217ENST00000549935 UBE2E2Q96LR5 201 aa9.22□□□□□ -0.93
CALCOCO1-217ENST00000549935 DEFB131AP59861 70 aa9.22□□□□□ -0.93
CALCOCO1-217ENST00000549935 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.22□□□□□ -0.93
CALCOCO1-217ENST00000549935 DAND5Q8N907 189 aa9.22□□□□□ -0.93
CALCOCO1-217ENST00000549935 Q9UF83 564 aa9.22□□□□□ -0.93
CALCOCO1-217ENST00000549935 FAM208BQ5VWN6 2430 aa9.21□□□□□ -0.93
CALCOCO1-217ENST00000549935 J3QLI3 93 aa9.21□□□□□ -0.94
CALCOCO1-217ENST00000549935 CXCL5P42830 114 aa9.21□□□□□ -0.94
CALCOCO1-217ENST00000549935 PEMTQ9UBM1 199 aa9.21□□□□□ -0.94
CALCOCO1-217ENST00000549935 Q9H8V8 135 aa9.2□□□□□ -0.94
CALCOCO1-217ENST00000549935 FAM236AA0A1B0GUQ0 79 aa9.2□□□□□ -0.94
CALCOCO1-217ENST00000549935 FAM236BA0A1B0GV22 79 aa9.2□□□□□ -0.94
CALCOCO1-217ENST00000549935 Q6YL49 198 aa9.2□□□□□ -0.94
CALCOCO1-217ENST00000549935 SMCR5Q8TEV8 140 aa9.2□□□□□ -0.94
CALCOCO1-217ENST00000549935 CSDC2Q9Y534 153 aaKnown RBP9.2□□□□□ -0.94
CALCOCO1-217ENST00000549935 IGHV3OR16-12A0A075B7B8 117 aa9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 LINC00242Q5T6M2 205 aa9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 MYO9AB2RTY4 2548 aa9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 RBMY1BA6NDE4 496 aaKnown RBP9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 RBMY1EA6NEQ0 496 aaKnown RBP9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 RS1O15537 224 aa9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 RBMY1DP0C7P1 496 aaKnown RBP9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 COX6A2Q02221 97 aa9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 DAZ2Q13117 558 aaKnown RBP9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 SOSTDC1Q6X4U4 206 aa9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 DAZ4Q86SG3 579 aaKnown RBP9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 C5orf38Q86SI9 138 aa9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 C11orf72Q8NBR9 251 aa9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 ZNF625Q96I27 306 aaPredicted RBP9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 DAZ3Q9NR90 486 aaKnown RBP9.19□□□□□ -0.94
CALCOCO1-217ENST00000549935 CFAP161Q6P656 301 aa9.18□□□□□ -0.94
CALCOCO1-217ENST00000549935 C3orf22Q8N5N4 141 aa9.18□□□□□ -0.94
CALCOCO1-217ENST00000549935 C22orf24Q9Y442 160 aa9.18□□□□□ -0.94
CALCOCO1-217ENST00000549935 NACAE9PAV3 2078 aa9.18□□□□□ -0.94
CALCOCO1-217ENST00000549935 SMIM1B2RUZ4 78 aa9.17□□□□□ -0.94
CALCOCO1-217ENST00000549935 UQCRQO14949 82 aa9.17□□□□□ -0.94
CALCOCO1-217ENST00000549935 PF4P02776 101 aa9.17□□□□□ -0.94
CALCOCO1-217ENST00000549935 BAALC-AS2P0C853 105 aa9.17□□□□□ -0.94
CALCOCO1-217ENST00000549935 INAFM2P0DMQ5 153 aa9.17□□□□□ -0.94
CALCOCO1-217ENST00000549935 DGAT2L7PQ6IED9 249 aa9.17□□□□□ -0.94
CALCOCO1-217ENST00000549935 Q8N2B8 174 aa9.17□□□□□ -0.94
CALCOCO1-217ENST00000549935 LRRK2Q5S007 2527 aa9.17□□□□□ -0.94
CALCOCO1-217ENST00000549935 CUBNO60494 3623 aa9.17□□□□□ -0.94
CALCOCO1-217ENST00000549935 TEX15Q9BXT5 2789 aa9.16□□□□□ -0.94
CALCOCO1-217ENST00000549935 KHDC1LQ5JSQ8 128 aa9.16□□□□□ -0.94
CALCOCO1-217ENST00000549935 HIST2H2BDQ6DRA6 164 aa9.16□□□□□ -0.94
CALCOCO1-217ENST00000549935 LINC00526Q96FQ7 95 aa9.16□□□□□ -0.94
CALCOCO1-217ENST00000549935 PTPN13Q12923 2485 aa9.16□□□□□ -0.94
CALCOCO1-217ENST00000549935 IGHV3-38A0A0C4DH36 116 aa9.16□□□□□ -0.94
CALCOCO1-217ENST00000549935 FSHBP01225 129 aa9.16□□□□□ -0.94
CALCOCO1-217ENST00000549935 ZFYVE26Q68DK2 2539 aa9.16□□□□□ -0.94
CALCOCO1-217ENST00000549935 IGHV4-31P0DP07 118 aa9.15□□□□□ -0.94
CALCOCO1-217ENST00000549935 HIST2H2BCQ6DN03 193 aa9.15□□□□□ -0.94
CALCOCO1-217ENST00000549935 ABCA12Q86UK0 2595 aa9.15□□□□□ -0.95
CALCOCO1-217ENST00000549935 F5H768 121 aa9.14□□□□□ -0.95
CALCOCO1-217ENST00000549935 RPL28P46779 137 aaKnown RBP9.14□□□□□ -0.95
CALCOCO1-217ENST00000549935 NDUFA7O95182 113 aa9.14□□□□□ -0.95
CALCOCO1-217ENST00000549935 HIST1H4AP62805 103 aaKnown RBP9.14□□□□□ -0.95
CALCOCO1-217ENST00000549935 PRIMA1Q86XR5 153 aa9.14□□□□□ -0.95
CALCOCO1-217ENST00000549935 OVOL2Q9BRP0 275 aa9.14□□□□□ -0.95
CALCOCO1-217ENST00000549935 ZNF462Q96JM2 2506 aa9.13□□□□□ -0.95
CALCOCO1-217ENST00000549935 TRAV13-2A0A0B4J235 113 aa9.13□□□□□ -0.95
CALCOCO1-217ENST00000549935 C9orf153Q5TBE3 101 aa9.13□□□□□ -0.95
CALCOCO1-217ENST00000549935 FAM218AQ96MZ4 157 aa9.13□□□□□ -0.95
CALCOCO1-217ENST00000549935 MAP6D1Q9H9H5 199 aa9.13□□□□□ -0.95
CALCOCO1-217ENST00000549935 CR1P17927 2039 aa9.13□□□□□ -0.95
CALCOCO1-217ENST00000549935 NAV2Q8IVL1 2488 aa9.13□□□□□ -0.95
CALCOCO1-217ENST00000549935 DYNLRB2Q8TF09 96 aa9.13□□□□□ -0.95
CALCOCO1-217ENST00000549935 TRBV10-1A0A0K0K1A3 114 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms