RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 ATRAIDQ6UW56 229 aa4.36□□□□□ -1.71
UBE2N-204ENST00000549833 SH2D6Q7Z4S9 175 aa4.36□□□□□ -1.71
UBE2N-204ENST00000549833 ATP5L2Q7Z4Y8 100 aa4.36□□□□□ -1.71
UBE2N-204ENST00000549833 DEFB104AQ8WTQ1 72 aa4.36□□□□□ -1.71
UBE2N-204ENST00000549833 IMMP2LQ96T52 175 aa4.36□□□□□ -1.71
UBE2N-204ENST00000549833 MRPS16Q9Y3D3 137 aaKnown RBP4.36□□□□□ -1.71
UBE2N-204ENST00000549833 RYR2Q92736 4967 aa4.35□□□□□ -1.71
UBE2N-204ENST00000549833 H7C1H1 209 aa4.35□□□□□ -1.71
UBE2N-204ENST00000549833 S100A8P05109 93 aa4.35□□□□□ -1.71
UBE2N-204ENST00000549833 S100PP25815 95 aa4.35□□□□□ -1.71
UBE2N-204ENST00000549833 RPS10P46783 165 aaKnown RBP4.35□□□□□ -1.71
UBE2N-204ENST00000549833 MAJINQ3KP22 176 aa4.35□□□□□ -1.71
UBE2N-204ENST00000549833 ZC2HC1BQ5TFG8 222 aa4.35□□□□□ -1.71
UBE2N-204ENST00000549833 WFDC10BQ8IUB3 73 aa4.35□□□□□ -1.71
UBE2N-204ENST00000549833 BTF3L4Q96K17 158 aa4.35□□□□□ -1.71
UBE2N-204ENST00000549833 DNAJC30Q96LL9 226 aa4.35□□□□□ -1.71
UBE2N-204ENST00000549833 OPRPNQ99935 248 aaPredicted RBP4.35□□□□□ -1.71
UBE2N-204ENST00000549833 GTSF1LQ9H1H1 148 aa4.35□□□□□ -1.71
UBE2N-204ENST00000549833 NIT2Q9NQR4 276 aa4.35□□□□□ -1.71
UBE2N-204ENST00000549833 TMEM242Q9NWH2 141 aa4.35□□□□□ -1.71
UBE2N-204ENST00000549833 FRAS1Q86XX4 4008 aa4.35□□□□□ -1.71
UBE2N-204ENST00000549833 TRAV9-1A0A075B6T8 112 aa4.34□□□□□ -1.71
UBE2N-204ENST00000549833 A0A087X002 238 aa4.34□□□□□ -1.71
UBE2N-204ENST00000549833 TGIF2-C20orf24A0A0A6YYL0 155 aa4.34□□□□□ -1.71
UBE2N-204ENST00000549833 M0R2N4 97 aa4.34□□□□□ -1.71
UBE2N-204ENST00000549833 OR10J3Q5JRS4 329 aa4.34□□□□□ -1.71
UBE2N-204ENST00000549833 LELP1Q5T871 98 aa4.34□□□□□ -1.71
UBE2N-204ENST00000549833 TMEM136Q6ZRR5 245 aa4.34□□□□□ -1.71
UBE2N-204ENST00000549833 MRAP2Q96G30 205 aa4.34□□□□□ -1.71
UBE2N-204ENST00000549833 UPK3BQ9BT76 320 aa4.34□□□□□ -1.71
UBE2N-204ENST00000549833 Q9HAA7 133 aa4.34□□□□□ -1.71
UBE2N-204ENST00000549833 TRAV8-6A0A0B4J262 113 aa4.33□□□□□ -1.72
UBE2N-204ENST00000549833 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
UBE2N-204ENST00000549833 D6R8Y8 96 aa4.33□□□□□ -1.72
UBE2N-204ENST00000549833 SIVA1O15304 175 aa4.33□□□□□ -1.72
UBE2N-204ENST00000549833 CKS2P33552 79 aa4.33□□□□□ -1.72
UBE2N-204ENST00000549833 ELOBQ15370 118 aa4.33□□□□□ -1.72
UBE2N-204ENST00000549833 NTM-AS1Q6ZSK4 140 aa4.33□□□□□ -1.72
UBE2N-204ENST00000549833 DAZ4Q86SG3 579 aaKnown RBP4.33□□□□□ -1.72
UBE2N-204ENST00000549833 CBLN2Q8IUK8 224 aa4.33□□□□□ -1.72
UBE2N-204ENST00000549833 FRZBQ92765 325 aa4.33□□□□□ -1.72
UBE2N-204ENST00000549833 ST20Q9HBF5 79 aa4.33□□□□□ -1.72
UBE2N-204ENST00000549833 DAZ3Q9NR90 486 aaKnown RBP4.33□□□□□ -1.72
UBE2N-204ENST00000549833 TRBV6-8A0A0A6YYG3 113 aa4.32□□□□□ -1.72
UBE2N-204ENST00000549833 TRBV6-5A0A0K0K1A5 114 aa4.32□□□□□ -1.72
UBE2N-204ENST00000549833 NBDYA0A0U1RRE5 68 aa4.32□□□□□ -1.72
UBE2N-204ENST00000549833 NPYP01303 97 aa4.32□□□□□ -1.72
UBE2N-204ENST00000549833 IGHV3-30P01768 117 aa4.32□□□□□ -1.72
UBE2N-204ENST00000549833 IGHV3-33P01772 117 aa4.32□□□□□ -1.72
UBE2N-204ENST00000549833 IGHV3-30-3P0DP02 117 aa4.32□□□□□ -1.72
UBE2N-204ENST00000549833 IGHV3-30-5P0DP03 117 aa4.32□□□□□ -1.72
UBE2N-204ENST00000549833 Q6ZR54 194 aa4.32□□□□□ -1.72
UBE2N-204ENST00000549833 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.32□□□□□ -1.72
UBE2N-204ENST00000549833 PRELID3AQ96N28 172 aa4.32□□□□□ -1.72
UBE2N-204ENST00000549833 YPEL4Q96NS1 127 aa4.32□□□□□ -1.72
UBE2N-204ENST00000549833 TMEM70Q9BUB7 260 aa4.32□□□□□ -1.72
UBE2N-204ENST00000549833 DNAH10Q8IVF4 4471 aa4.32□□□□□ -1.72
UBE2N-204ENST00000549833 RYR3Q15413 4870 aa4.31□□□□□ -1.72
UBE2N-204ENST00000549833 TRBV25-1A0A075B6N4 114 aa4.31□□□□□ -1.72
UBE2N-204ENST00000549833 SCO1O75880 301 aa4.31□□□□□ -1.72
UBE2N-204ENST00000549833 APCSP02743 223 aa4.31□□□□□ -1.72
UBE2N-204ENST00000549833 DNAH10OSP0CZ25 163 aa4.31□□□□□ -1.72
UBE2N-204ENST00000549833 PMCHP20382 165 aa4.31□□□□□ -1.72
UBE2N-204ENST00000549833 POLR2KP53803 58 aaKnown RBP4.31□□□□□ -1.72
UBE2N-204ENST00000549833 COTL1Q14019 142 aa4.31□□□□□ -1.72
UBE2N-204ENST00000549833 LINC01620Q4KN68 170 aa4.31□□□□□ -1.72
UBE2N-204ENST00000549833 ORMDL3Q8N138 153 aa4.31□□□□□ -1.72
UBE2N-204ENST00000549833 GNB1LQ9BYB4 327 aa4.31□□□□□ -1.72
UBE2N-204ENST00000549833 SMCO4Q9NRQ5 59 aa4.31□□□□□ -1.72
UBE2N-204ENST00000549833 DNAH17Q9UFH2 4485 aa4.31□□□□□ -1.72
UBE2N-204ENST00000549833 TRBV24-1A0A075B6N3 115 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 IGHV1-24A0A0C4DH33 117 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 TRBV27A0A0K0K1C4 114 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 I3L3M4 83 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 PPP1R17O96001 155 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 HLA-DQA1P01909 254 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 PPBPP02775 128 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 FABP9Q0Z7S8 132 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 IQCJQ1A5X6 159 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 TMEM97Q5BJF2 176 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 LINC01556Q5JQF7 62 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 NIT1Q86X76 327 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 KRTAP7-1Q8IUC3 87 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 CHCHD5Q9BSY4 110 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 TMEM243Q9BU79 118 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
UBE2N-204ENST00000549833 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.29□□□□□ -1.72
UBE2N-204ENST00000549833 LOC389332A0A1B0GUA5 103 aa4.29□□□□□ -1.72
UBE2N-204ENST00000549833 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
UBE2N-204ENST00000549833 IGKV2-29A2NJV5 120 aaPredicted RBP4.29□□□□□ -1.72
UBE2N-204ENST00000549833 TMEM262E9PQX1 116 aa4.29□□□□□ -1.72
UBE2N-204ENST00000549833 PHOX2AO14813 284 aa4.29□□□□□ -1.72
UBE2N-204ENST00000549833 TCAPO15273 167 aa4.29□□□□□ -1.72
UBE2N-204ENST00000549833 MT-ND6P03923 174 aa4.29□□□□□ -1.72
UBE2N-204ENST00000549833 COX19Q49B96 90 aa4.29□□□□□ -1.72
UBE2N-204ENST00000549833 MPV17L2Q567V2 206 aa4.29□□□□□ -1.72
UBE2N-204ENST00000549833 TTC32Q5I0X7 151 aa4.29□□□□□ -1.72
UBE2N-204ENST00000549833 C20orf78Q9BR46 151 aa4.29□□□□□ -1.72
UBE2N-204ENST00000549833 CHCHD7Q9BUK0 85 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms