RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 K7EP34 96 aa3.4□□□□□ -1.87
ATP2B1-206ENST00000549727 NDUFA4O00483 81 aa3.4□□□□□ -1.87
ATP2B1-206ENST00000549727 NPFFO15130 113 aa3.4□□□□□ -1.87
ATP2B1-206ENST00000549727 SMIM17P0DL12 118 aa3.4□□□□□ -1.87
ATP2B1-206ENST00000549727 S100A4P26447 101 aaKnown RBP3.4□□□□□ -1.87
ATP2B1-206ENST00000549727 NDPQ00604 133 aa3.4□□□□□ -1.87
ATP2B1-206ENST00000549727 SCXQ7RTU7 201 aa3.4□□□□□ -1.87
ATP2B1-206ENST00000549727 DYNAPQ8N1N2 210 aa3.4□□□□□ -1.87
ATP2B1-206ENST00000549727 TMEM158Q8WZ71 300 aa3.4□□□□□ -1.87
ATP2B1-206ENST00000549727 USMG5Q96IX5 58 aa3.4□□□□□ -1.87
ATP2B1-206ENST00000549727 AGPAT4-IT1Q9H0P7 198 aa3.4□□□□□ -1.87
ATP2B1-206ENST00000549727 C11orf68Q9H3H3 251 aaKnown RBP3.4□□□□□ -1.87
ATP2B1-206ENST00000549727 PLXNB1O43157 2135 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 DSPP15924 2871 aaKnown RBP3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 CEP250Q9BV73 2442 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 A0A1B0GVX0 72 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 A0A1W2PPM0 123 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 H3BUT2 72 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 LY6HO94772 140 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 ASIPP42127 132 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 PCP2Q8IVA1 136 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 POM121L12Q8N7R1 296 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 C15orf56Q8N910 161 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 TM2D3Q9BRN9 247 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 DPH3P1Q9H4G8 78 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 HHLA3Q9XRX5 114 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 PHLDA3Q9Y5J5 127 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 SPCS1Q9Y6A9 102 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 ROS1P08922 2347 aa3.39□□□□□ -1.87
ATP2B1-206ENST00000549727 PKDREJQ9NTG1 2253 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 MAP1BP46821 2468 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 IGLV2-18A0A075B6J9 118 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 CLPSL1A2RUU4 121 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 IGLL5B9A064 214 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 C9JAW5 83 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 F8VRH5 84 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 F8W1H4 67 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 TRGV3P03979 118 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 HLA-DMBP28068 263 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 CEND1Q8N111 149 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 RNF182Q8N6D2 247 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 C5orf56Q8N8D9 126 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 LINC01006Q8NI28 216 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 B9D2Q9BPU9 175 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 SMIM2Q9BVW6 85 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 NBEAQ8NFP9 2946 aa3.38□□□□□ -1.87
ATP2B1-206ENST00000549727 TRBV25-1A0A075B6N4 114 aa3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 TRAV40A0A0B4J280 105 aa3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 G3V318 75 aa3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 IGHV1-69P01742 117 aa3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 FXYD7P58549 80 aa3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 HIGD2BQ4VC39 106 aa3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 GPHB5Q86YW7 130 aa3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 ITLN2Q8WWU7 325 aaPredicted RBP3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 RAB37Q96AX2 223 aa3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 SCGB3A1Q96QR1 104 aa3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 MRPL35Q9NZE8 188 aaKnown RBP3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 KLK5Q9Y337 293 aaPredicted RBP3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 ACACAQ13085 2346 aa3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 POLEQ07864 2286 aa3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 ANKHD1Q8IWZ3 2542 aaKnown RBP3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 ZNF292O60281 2723 aa3.37□□□□□ -1.87
ATP2B1-206ENST00000549727 TTC28Q96AY4 2481 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 ABCA1O95477 2261 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 IGHV3OR16-8A0A075B7F1 116 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 H3BVH4 76 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 UBE2L6O14933 153 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 GIG44P09565 113 aaPredicted RBP3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 KRTAP13-3Q3SY46 172 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 TMEM141Q96I45 108 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 BPESC1Q9GZL8 116 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 NHP2Q9NX24 153 aaKnown RBP3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 TP73-AS1Q9UF72 201 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 ERG28Q9UKR5 140 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 CELSR3Q9NYQ7 3312 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 PCNX1Q96RV3 2341 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 ANKRD11Q6UB99 2663 aaPredicted RBP3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 WDFY4Q6ZS81 3184 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 TPRP12270 2363 aaKnown RBP3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 COL6A3P12111 3177 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 MYMXA0A1B0GTQ4 84 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 P0DMU3 169 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 FAM231AP0DMU4 169 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 FAM231CP0DMU5 169 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 PRB4P10163 310 aaPredicted RBP3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 FOXI2Q6ZQN5 318 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 PRR15Q8IV56 129 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 C10orf126Q8N4M7 172 aa3.36□□□□□ -1.87
ATP2B1-206ENST00000549727 ZFHX2Q9C0A1 2572 aaPredicted RBP3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 PRRC2AP48634 2157 aaKnown RBP3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 IGKV2D-26A0A0A0MRZ7 120 aa3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 K7ERS5 55 aa3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 APC2O95996 2303 aa3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 MGPP08493 103 aa3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 TLX1NBP0CAT3 122 aa3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 RNASE4P34096 147 aaKnown RBP3.35□□□□□ -1.87
ATP2B1-206ENST00000549727 FXYD2P54710 66 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms