RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 EML5Q05BV3 1969 aa6.76□□□□□ -1.33
PPFIA2-216ENST00000549396 A0A1W2PPR1 153 aa6.76□□□□□ -1.33
PPFIA2-216ENST00000549396 MP68P56378 58 aa6.76□□□□□ -1.33
PPFIA2-216ENST00000549396 SS18L2Q9UHA2 77 aa6.76□□□□□ -1.33
PPFIA2-216ENST00000549396 ETDBQ3ZM63 59 aa6.75□□□□□ -1.33
PPFIA2-216ENST00000549396 LINC00173Q6ZV60 143 aa6.75□□□□□ -1.33
PPFIA2-216ENST00000549396 PTPRQQ9UMZ3 2332 aa6.75□□□□□ -1.33
PPFIA2-216ENST00000549396 K7ERJ3 54 aa6.74□□□□□ -1.33
PPFIA2-216ENST00000549396 LINC00959A0A1B0GUT2 108 aa6.74□□□□□ -1.33
PPFIA2-216ENST00000549396 NUPR1O60356 82 aa6.74□□□□□ -1.33
PPFIA2-216ENST00000549396 YPEL4Q96NS1 127 aa6.74□□□□□ -1.33
PPFIA2-216ENST00000549396 H3BNG1 76 aa6.74□□□□□ -1.33
PPFIA2-216ENST00000549396 KIAA1549Q9HCM3 1950 aa6.74□□□□□ -1.33
PPFIA2-216ENST00000549396 ATOX1O00244 68 aa6.73□□□□□ -1.33
PPFIA2-216ENST00000549396 DEFB105AQ8NG35 78 aa6.73□□□□□ -1.33
PPFIA2-216ENST00000549396 CDKN2A-AS1Q9UH64 79 aa6.73□□□□□ -1.33
PPFIA2-216ENST00000549396 EGFEM1PQ0D2K5 195 aa6.73□□□□□ -1.33
PPFIA2-216ENST00000549396 LECT2O14960 151 aa6.73□□□□□ -1.33
PPFIA2-216ENST00000549396 UBE2D1P51668 147 aa6.73□□□□□ -1.33
PPFIA2-216ENST00000549396 TTC28Q96AY4 2481 aa6.73□□□□□ -1.33
PPFIA2-216ENST00000549396 PCNX1Q96RV3 2341 aa6.73□□□□□ -1.33
PPFIA2-216ENST00000549396 C9orf153Q5TBE3 101 aa6.73□□□□□ -1.33
PPFIA2-216ENST00000549396 Q6ZS46 218 aa6.73□□□□□ -1.33
PPFIA2-216ENST00000549396 LINC00308Q8TCZ7 52 aa6.73□□□□□ -1.33
PPFIA2-216ENST00000549396 A0A1B0GUV1 79 aa6.72□□□□□ -1.33
PPFIA2-216ENST00000549396 C2orf48Q96LS8 159 aa6.72□□□□□ -1.33
PPFIA2-216ENST00000549396 PRR9Q5T870 116 aa6.72□□□□□ -1.33
PPFIA2-216ENST00000549396 C18orf65Q6ZTR6 163 aa6.72□□□□□ -1.33
PPFIA2-216ENST00000549396 RNASE8Q8TDE3 154 aaKnown RBP6.72□□□□□ -1.33
PPFIA2-216ENST00000549396 CDC42SE2Q9NRR3 84 aa6.72□□□□□ -1.33
PPFIA2-216ENST00000549396 FSHBP01225 129 aa6.71□□□□□ -1.33
PPFIA2-216ENST00000549396 FRMD6-AS1P0C7T7 363 aa6.71□□□□□ -1.33
PPFIA2-216ENST00000549396 FXYD2P54710 66 aa6.71□□□□□ -1.33
PPFIA2-216ENST00000549396 A0A0J9YWU9 116 aa6.71□□□□□ -1.34
PPFIA2-216ENST00000549396 CACNA1GO43497 2377 aa6.71□□□□□ -1.34
PPFIA2-216ENST00000549396 CDPF1Q6NVV7 123 aa6.7□□□□□ -1.34
PPFIA2-216ENST00000549396 C11orf21Q9P2W6 132 aa6.7□□□□□ -1.34
PPFIA2-216ENST00000549396 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.7□□□□□ -1.34
PPFIA2-216ENST00000549396 TRAV23DV6A0A075B6W5 121 aa6.7□□□□□ -1.34
PPFIA2-216ENST00000549396 FAM19A1Q7Z5A9 133 aa6.7□□□□□ -1.34
PPFIA2-216ENST00000549396 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.69□□□□□ -1.34
PPFIA2-216ENST00000549396 IGKV2D-26A0A0A0MRZ7 120 aa6.69□□□□□ -1.34
PPFIA2-216ENST00000549396 NDUFS5O43920 106 aa6.69□□□□□ -1.34
PPFIA2-216ENST00000549396 LINC00643Q86TS7 51 aa6.69□□□□□ -1.34
PPFIA2-216ENST00000549396 C1orf158Q8N1D5 194 aa6.69□□□□□ -1.34
PPFIA2-216ENST00000549396 TMEM258P61165 79 aa6.68□□□□□ -1.34
PPFIA2-216ENST00000549396 CEMP1Q6PRD7 247 aaPredicted RBP6.68□□□□□ -1.34
PPFIA2-216ENST00000549396 FHL2Q14192 279 aa6.68□□□□□ -1.34
PPFIA2-216ENST00000549396 TAX1BP3O14907 124 aa6.68□□□□□ -1.34
PPFIA2-216ENST00000549396 RAI1Q7Z5J4 1906 aaPredicted RBP6.67□□□□□ -1.34
PPFIA2-216ENST00000549396 A0A087WZ39 114 aa6.67□□□□□ -1.34
PPFIA2-216ENST00000549396 IGIPA6NJ69 53 aa6.67□□□□□ -1.34
PPFIA2-216ENST00000549396 ARFGEF3Q5TH69 2177 aa6.67□□□□□ -1.34
PPFIA2-216ENST00000549396 OXLD1Q5BKU9 147 aa6.67□□□□□ -1.34
PPFIA2-216ENST00000549396 UPK3BQ9BT76 320 aa6.67□□□□□ -1.34
PPFIA2-216ENST00000549396 PLCE1Q9P212 2302 aa6.67□□□□□ -1.34
PPFIA2-216ENST00000549396 FAM208BQ5VWN6 2430 aa6.66□□□□□ -1.34
PPFIA2-216ENST00000549396 IGKV2-24A0A0C4DH68 120 aa6.66□□□□□ -1.34
PPFIA2-216ENST00000549396 RPL28P46779 137 aaKnown RBP6.66□□□□□ -1.34
PPFIA2-216ENST00000549396 NANOS2P60321 138 aaKnown RBP6.66□□□□□ -1.34
PPFIA2-216ENST00000549396 SPTAN1Q13813 2472 aaKnown RBP6.66□□□□□ -1.34
PPFIA2-216ENST00000549396 NDUFC2O95298 119 aa6.66□□□□□ -1.34
PPFIA2-216ENST00000549396 FOXI1Q12951 378 aa6.65□□□□□ -1.34
PPFIA2-216ENST00000549396 DAND5Q8N907 189 aa6.65□□□□□ -1.34
PPFIA2-216ENST00000549396 AMELXQ99217 191 aa6.65□□□□□ -1.34
PPFIA2-216ENST00000549396 FAM19A4Q96LR4 140 aa6.64□□□□□ -1.35
PPFIA2-216ENST00000549396 SMR3AQ99954 134 aa6.64□□□□□ -1.35
PPFIA2-216ENST00000549396 HIGD2AQ9BW72 106 aa6.64□□□□□ -1.35
PPFIA2-216ENST00000549396 ACACBO00763 2458 aa6.64□□□□□ -1.35
PPFIA2-216ENST00000549396 BPY2O14599 106 aa6.64□□□□□ -1.35
PPFIA2-216ENST00000549396 TCL1BO95988 128 aa6.63□□□□□ -1.35
PPFIA2-216ENST00000549396 WFDC10AQ9H1F0 79 aa6.63□□□□□ -1.35
PPFIA2-216ENST00000549396 LY6G6CO95867 125 aa6.63□□□□□ -1.35
PPFIA2-216ENST00000549396 LINC01546A6NGU7 62 aa6.63□□□□□ -1.35
PPFIA2-216ENST00000549396 NBASA2RRP1 2371 aa6.63□□□□□ -1.35
PPFIA2-216ENST00000549396 PTPRBP23467 1997 aa6.63□□□□□ -1.35
PPFIA2-216ENST00000549396 G3V4G9 280 aa6.63□□□□□ -1.35
PPFIA2-216ENST00000549396 Q6JHZ5 121 aa6.63□□□□□ -1.35
PPFIA2-216ENST00000549396 PRYO14603 147 aa6.62□□□□□ -1.35
PPFIA2-216ENST00000549396 FAM19A5Q7Z5A7 132 aaPredicted RBP6.62□□□□□ -1.35
PPFIA2-216ENST00000549396 CLEC2BQ92478 149 aa6.62□□□□□ -1.35
PPFIA2-216ENST00000549396 LINC00242Q5T6M2 205 aa6.62□□□□□ -1.35
PPFIA2-216ENST00000549396 C1orf134Q5TEV5 83 aa6.61□□□□□ -1.35
PPFIA2-216ENST00000549396 POM121L12Q8N7R1 296 aa6.61□□□□□ -1.35
PPFIA2-216ENST00000549396 ZNF73O43830 326 aaPredicted RBP6.61□□□□□ -1.35
PPFIA2-216ENST00000549396 CHKB-CPT1BH3BT56 60 aa6.6□□□□□ -1.35
PPFIA2-216ENST00000549396 PIEZO1Q92508 2521 aa6.6□□□□□ -1.35
PPFIA2-216ENST00000549396 LINC01556Q5JQF7 62 aa6.6□□□□□ -1.35
PPFIA2-216ENST00000549396 LYPD5Q6UWN5 251 aa6.6□□□□□ -1.35
PPFIA2-216ENST00000549396 IMUPQ9GZP8 106 aa6.6□□□□□ -1.35
PPFIA2-216ENST00000549396 NACAE9PAV3 2078 aa6.6□□□□□ -1.35
PPFIA2-216ENST00000549396 LOC100131303A0A0U1RQF7 123 aa6.6□□□□□ -1.35
PPFIA2-216ENST00000549396 CUL9Q8IWT3 2517 aa6.6□□□□□ -1.35
PPFIA2-216ENST00000549396 CYSRT1A8MQ03 144 aa6.59□□□□□ -1.35
PPFIA2-216ENST00000549396 C6orf99Q4VX62 202 aa6.59□□□□□ -1.35
PPFIA2-216ENST00000549396 WFDC9Q8NEX5 89 aa6.59□□□□□ -1.35
PPFIA2-216ENST00000549396 PLAC8L1A1L4L8 177 aa6.59□□□□□ -1.35
PPFIA2-216ENST00000549396 SMIM1B2RUZ4 78 aa6.59□□□□□ -1.35
PPFIA2-216ENST00000549396 LST1O00453 97 aa6.59□□□□□ -1.35
PPFIA2-216ENST00000549396 HCFC1P51610 2035 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms