RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 KRTAP9-7A8MTY7 169 aa6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 UPK1BO75841 260 aa6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 APCSP02743 223 aa6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 TRGC1P0CF51 173 aa6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 RPL13AP40429 203 aaKnown RBP6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 RPL18AQ02543 176 aaKnown RBP6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 SS18Q15532 418 aa6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 CD164L2Q6UWJ8 174 aa6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 TMUB2Q71RG4 321 aa6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 KRTAP11-1Q8IUC1 163 aa6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 NUP35Q8NFH5 326 aa6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 OR2D3Q8NGH3 330 aa6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 TMEM101Q96IK0 257 aa6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 BTF3L4Q96K17 158 aa6.45□□□□□ -1.38
TRAFD1-206ENST00000549358 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.44□□□□□ -1.38
TRAFD1-206ENST00000549358 NCR2O95944 276 aa6.44□□□□□ -1.38
TRAFD1-206ENST00000549358 ZNF25P17030 456 aaPredicted RBP6.44□□□□□ -1.38
TRAFD1-206ENST00000549358 MEF2BQ02080 365 aaPredicted RBP6.44□□□□□ -1.38
TRAFD1-206ENST00000549358 Q5BKY6 102 aa6.44□□□□□ -1.38
TRAFD1-206ENST00000549358 GATD1Q8NB37 220 aa6.44□□□□□ -1.38
TRAFD1-206ENST00000549358 S100ZQ8WXG8 99 aa6.44□□□□□ -1.38
TRAFD1-206ENST00000549358 CAMK2N2Q96S95 79 aa6.44□□□□□ -1.38
TRAFD1-206ENST00000549358 OPRPNQ99935 248 aaPredicted RBP6.44□□□□□ -1.38
TRAFD1-206ENST00000549358 F2Z2F3 143 aa6.43□□□□□ -1.38
TRAFD1-206ENST00000549358 DEFA1P59665 94 aa6.43□□□□□ -1.38
TRAFD1-206ENST00000549358 RPS20P60866 119 aaKnown RBP6.43□□□□□ -1.38
TRAFD1-206ENST00000549358 LYZL1Q6UWQ5 148 aa6.43□□□□□ -1.38
TRAFD1-206ENST00000549358 CRCT1Q9UGL9 99 aa6.43□□□□□ -1.38
TRAFD1-206ENST00000549358 A0A1B0GV50 99 aa6.42□□□□□ -1.38
TRAFD1-206ENST00000549358 FAM168BA1KXE4 195 aa6.42□□□□□ -1.38
TRAFD1-206ENST00000549358 PFDN1O60925 122 aa6.42□□□□□ -1.38
TRAFD1-206ENST00000549358 EIF5AL1Q6IS14 154 aaKnown RBP6.42□□□□□ -1.38
TRAFD1-206ENST00000549358 RPL39LQ96EH5 51 aaKnown RBP6.42□□□□□ -1.38
TRAFD1-206ENST00000549358 KRTAP4-11Q9BYQ6 195 aa6.42□□□□□ -1.38
TRAFD1-206ENST00000549358 B5MCH6 92 aa6.41□□□□□ -1.38
TRAFD1-206ENST00000549358 BCL2L11O43521 198 aa6.41□□□□□ -1.38
TRAFD1-206ENST00000549358 RPL35P42766 123 aaKnown RBP6.41□□□□□ -1.38
TRAFD1-206ENST00000549358 TWIST1Q15672 202 aa6.41□□□□□ -1.38
TRAFD1-206ENST00000549358 LINC00299Q6ZSB3 139 aa6.41□□□□□ -1.38
TRAFD1-206ENST00000549358 TSKUQ8WUA8 353 aa6.41□□□□□ -1.38
TRAFD1-206ENST00000549358 SFT2D1Q8WV19 159 aa6.41□□□□□ -1.38
TRAFD1-206ENST00000549358 COX7A2LO14548 114 aa6.4□□□□□ -1.38
TRAFD1-206ENST00000549358 CDC42SE2Q9NRR3 84 aa6.4□□□□□ -1.38
TRAFD1-206ENST00000549358 CARHSP1Q9Y2V2 147 aaKnown RBP6.4□□□□□ -1.38
TRAFD1-206ENST00000549358 ALG5Q9Y673 324 aa6.4□□□□□ -1.38
TRAFD1-206ENST00000549358 XKRY2A2RUG3 117 aa6.39□□□□□ -1.39
TRAFD1-206ENST00000549358 C19orf71A6NCJ1 209 aa6.39□□□□□ -1.39
TRAFD1-206ENST00000549358 SDHAF1A6NFY7 115 aa6.39□□□□□ -1.39
TRAFD1-206ENST00000549358 I3L3M4 83 aa6.39□□□□□ -1.39
TRAFD1-206ENST00000549358 IFNA1P01562 189 aa6.39□□□□□ -1.39
TRAFD1-206ENST00000549358 PMCHP20382 165 aa6.39□□□□□ -1.39
TRAFD1-206ENST00000549358 FAM19A5Q7Z5A7 132 aaPredicted RBP6.39□□□□□ -1.39
TRAFD1-206ENST00000549358 C9orf62Q8N4C0 152 aa6.39□□□□□ -1.39
TRAFD1-206ENST00000549358 C2orf48Q96LS8 159 aa6.39□□□□□ -1.39
TRAFD1-206ENST00000549358 FXYD6-FXYD2A0A087WZ82 144 aa6.38□□□□□ -1.39
TRAFD1-206ENST00000549358 C1orf196B1AJZ1 125 aa6.38□□□□□ -1.39
TRAFD1-206ENST00000549358 ESDP10768 282 aa6.38□□□□□ -1.39
TRAFD1-206ENST00000549358 CENPWQ5EE01 88 aa6.38□□□□□ -1.39
TRAFD1-206ENST00000549358 KCNRGQ8N5I3 272 aa6.38□□□□□ -1.39
TRAFD1-206ENST00000549358 NDUFA13Q9P0J0 144 aa6.38□□□□□ -1.39
TRAFD1-206ENST00000549358 FOXA3P55318 350 aaPredicted RBP6.37□□□□□ -1.39
TRAFD1-206ENST00000549358 UBE2BP63146 152 aa6.37□□□□□ -1.39
TRAFD1-206ENST00000549358 RNF151Q2KHN1 245 aa6.37□□□□□ -1.39
TRAFD1-206ENST00000549358 C5orf38Q86SI9 138 aa6.37□□□□□ -1.39
TRAFD1-206ENST00000549358 FAM213BQ8TBF2 198 aa6.37□□□□□ -1.39
TRAFD1-206ENST00000549358 MBD3L1Q8WWY6 194 aa6.37□□□□□ -1.39
TRAFD1-206ENST00000549358 MRAP2Q96G30 205 aa6.37□□□□□ -1.39
TRAFD1-206ENST00000549358 CYTL1Q9NRR1 136 aa6.37□□□□□ -1.39
TRAFD1-206ENST00000549358 RAB19A4D1S5 217 aa6.36□□□□□ -1.39
TRAFD1-206ENST00000549358 GAGE10A6NGK3 116 aa6.36□□□□□ -1.39
TRAFD1-206ENST00000549358 TSHBP01222 138 aa6.36□□□□□ -1.39
TRAFD1-206ENST00000549358 CTRLP40313 264 aa6.36□□□□□ -1.39
TRAFD1-206ENST00000549358 SPAG11BQ08648 103 aa6.36□□□□□ -1.39
TRAFD1-206ENST00000549358 MRPL52Q86TS9 123 aaKnown RBP6.36□□□□□ -1.39
TRAFD1-206ENST00000549358 NUDT10Q8NFP7 164 aa6.36□□□□□ -1.39
TRAFD1-206ENST00000549358 NUDT11Q96G61 164 aa6.36□□□□□ -1.39
TRAFD1-206ENST00000549358 RPP21Q9H633 154 aaKnown RBP6.36□□□□□ -1.39
TRAFD1-206ENST00000549358 G3V3Q6 166 aa6.35□□□□□ -1.39
TRAFD1-206ENST00000549358 TEX261Q6UWH6 196 aa6.35□□□□□ -1.39
TRAFD1-206ENST00000549358 KRTAP7-1Q8IUC3 87 aa6.35□□□□□ -1.39
TRAFD1-206ENST00000549358 IMMP2LQ96T52 175 aa6.35□□□□□ -1.39
TRAFD1-206ENST00000549358 RETNLBQ9BQ08 111 aa6.35□□□□□ -1.39
TRAFD1-206ENST00000549358 TMEM242Q9NWH2 141 aa6.35□□□□□ -1.39
TRAFD1-206ENST00000549358 MRPL35Q9NZE8 188 aaKnown RBP6.35□□□□□ -1.39
TRAFD1-206ENST00000549358 TRAV13-1A0A0B4J241 112 aa6.34□□□□□ -1.39
TRAFD1-206ENST00000549358 M0QXV9 152 aa6.34□□□□□ -1.39
TRAFD1-206ENST00000549358 GNG4P50150 75 aa6.34□□□□□ -1.39
TRAFD1-206ENST00000549358 GAGE2EQ4V326 116 aa6.34□□□□□ -1.39
TRAFD1-206ENST00000549358 RNASE13Q5GAN3 156 aaKnown RBP6.34□□□□□ -1.39
TRAFD1-206ENST00000549358 SMIM15Q7Z3B0 74 aa6.34□□□□□ -1.39
TRAFD1-206ENST00000549358 CNFNQ9BYD5 112 aa6.34□□□□□ -1.39
TRAFD1-206ENST00000549358 GAGE2DQ9UEU5 116 aa6.34□□□□□ -1.39
TRAFD1-206ENST00000549358 MUC17Q685J3 4493 aa6.34□□□□□ -1.4
TRAFD1-206ENST00000549358 A0A087X002 238 aa6.33□□□□□ -1.4
TRAFD1-206ENST00000549358 TRBV6-5A0A0K0K1A5 114 aa6.33□□□□□ -1.4
TRAFD1-206ENST00000549358 ZNF861PO60384 105 aa6.33□□□□□ -1.4
TRAFD1-206ENST00000549358 GIPP09681 153 aaPredicted RBP6.33□□□□□ -1.4
TRAFD1-206ENST00000549358 C10orf25Q5T742 122 aa6.33□□□□□ -1.4
TRAFD1-206ENST00000549358 TYMSOSQ8TAI1 123 aa6.33□□□□□ -1.4
TRAFD1-206ENST00000549358 C11orf52Q96A22 123 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms