RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 OR5A1Q8NGJ0 315 aa11.7□□□□□ -0.54
RAPGEF3-220ENST00000549347 TIMM21Q9BVV7 248 aa11.7□□□□□ -0.54
RAPGEF3-220ENST00000549347 MRPL18Q9H0U6 180 aaKnown RBP11.7□□□□□ -0.54
RAPGEF3-220ENST00000549347 LOC389332A0A1B0GUA5 103 aa11.69□□□□□ -0.54
RAPGEF3-220ENST00000549347 Q8N814 137 aa11.69□□□□□ -0.54
RAPGEF3-220ENST00000549347 DNAH5Q8TE73 4624 aa11.68□□□□□ -0.54
RAPGEF3-220ENST00000549347 K7EMI3 77 aa11.68□□□□□ -0.54
RAPGEF3-220ENST00000549347 RAB5AP20339 215 aa11.68□□□□□ -0.54
RAPGEF3-220ENST00000549347 CDPF1Q6NVV7 123 aa11.68□□□□□ -0.54
RAPGEF3-220ENST00000549347 ALKBH7Q9BT30 221 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF3-220ENST00000549347 NXT2Q9NPJ8 142 aaKnown RBP11.68□□□□□ -0.54
RAPGEF3-220ENST00000549347 CDC42SE2Q9NRR3 84 aa11.68□□□□□ -0.54
RAPGEF3-220ENST00000549347 IGLV10-54A0A075B6I4 117 aa11.67□□□□□ -0.54
RAPGEF3-220ENST00000549347 C16orf90A8MZG2 172 aa11.67□□□□□ -0.54
RAPGEF3-220ENST00000549347 RPL39P62891 51 aaKnown RBP11.67□□□□□ -0.54
RAPGEF3-220ENST00000549347 BAALCQ8WXS3 180 aa11.67□□□□□ -0.54
RAPGEF3-220ENST00000549347 SMCO4Q9NRQ5 59 aa11.67□□□□□ -0.54
RAPGEF3-220ENST00000549347 PGPEP1Q9NXJ5 209 aa11.67□□□□□ -0.54
RAPGEF3-220ENST00000549347 LECT2O14960 151 aa11.66□□□□□ -0.54
RAPGEF3-220ENST00000549347 FABP9Q0Z7S8 132 aa11.66□□□□□ -0.54
RAPGEF3-220ENST00000549347 DGAT2L7PQ6IED9 249 aa11.66□□□□□ -0.54
RAPGEF3-220ENST00000549347 CBLN2Q8IUK8 224 aa11.66□□□□□ -0.54
RAPGEF3-220ENST00000549347 ZNF664Q8N3J9 261 aa11.66□□□□□ -0.54
RAPGEF3-220ENST00000549347 SPANXA1Q9NS26 97 aa11.66□□□□□ -0.54
RAPGEF3-220ENST00000549347 NTN5Q8WTR8 489 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF3-220ENST00000549347 TRAPPC1Q9Y5R8 145 aa11.65□□□□□ -0.54
RAPGEF3-220ENST00000549347 IGKV3OR2-268A0A0C4DH90 116 aa11.64□□□□□ -0.55
RAPGEF3-220ENST00000549347 IFI27P40305 119 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-220ENST00000549347 ORMDL2Q53FV1 153 aa11.64□□□□□ -0.55
RAPGEF3-220ENST00000549347 Q6ZUT4 128 aa11.64□□□□□ -0.55
RAPGEF3-220ENST00000549347 LINC00959A0A1B0GUT2 108 aa11.63□□□□□ -0.55
RAPGEF3-220ENST00000549347 LRP1BQ9NZR2 4599 aa11.62□□□□□ -0.55
RAPGEF3-220ENST00000549347 FUSP35637 526 aaKnown RBP eCLIP11.62□□□□□ -0.55
RAPGEF3-220ENST00000549347 MRPS36P82909 103 aaKnown RBP11.62□□□□□ -0.55
RAPGEF3-220ENST00000549347 CHCHD10Q8WYQ3 142 aaPredicted RBP11.62□□□□□ -0.55
RAPGEF3-220ENST00000549347 FAM104AQ969W3 186 aa11.62□□□□□ -0.55
RAPGEF3-220ENST00000549347 PYGO1Q9Y3Y4 419 aa11.62□□□□□ -0.55
RAPGEF3-220ENST00000549347 LINC01546A6NGU7 62 aa11.61□□□□□ -0.55
RAPGEF3-220ENST00000549347 USP17L23D6RBM5 183 aa11.61□□□□□ -0.55
RAPGEF3-220ENST00000549347 C14orf177Q52M58 125 aa11.61□□□□□ -0.55
RAPGEF3-220ENST00000549347 CYSLTR1Q9Y271 337 aa11.61□□□□□ -0.55
RAPGEF3-220ENST00000549347 IGLV5-52A0A0A0MRZ9 124 aa11.6□□□□□ -0.55
RAPGEF3-220ENST00000549347 GAGE12HA6NDE8 117 aa11.6□□□□□ -0.55
RAPGEF3-220ENST00000549347 RNASE13Q5GAN3 156 aaKnown RBP11.6□□□□□ -0.55
RAPGEF3-220ENST00000549347 C2orf66Q6UXQ4 117 aa11.6□□□□□ -0.55
RAPGEF3-220ENST00000549347 PRSS3P2Q8NHM4 247 aa11.6□□□□□ -0.55
RAPGEF3-220ENST00000549347 SS18Q15532 418 aa11.59□□□□□ -0.55
RAPGEF3-220ENST00000549347 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.58□□□□□ -0.56
RAPGEF3-220ENST00000549347 CCL25O15444 150 aa11.58□□□□□ -0.56
RAPGEF3-220ENST00000549347 G0S2P27469 103 aa11.58□□□□□ -0.56
RAPGEF3-220ENST00000549347 FOXI1Q12951 378 aa11.58□□□□□ -0.56
RAPGEF3-220ENST00000549347 C18orf32Q8TCD1 76 aa11.58□□□□□ -0.56
RAPGEF3-220ENST00000549347 IGLV4-3A0A075B6K6 122 aa11.57□□□□□ -0.56
RAPGEF3-220ENST00000549347 C1orf196B1AJZ1 125 aa11.57□□□□□ -0.56
RAPGEF3-220ENST00000549347 NPSP0C0P6 89 aa11.57□□□□□ -0.56
RAPGEF3-220ENST00000549347 XCL1P47992 114 aa11.57□□□□□ -0.56
RAPGEF3-220ENST00000549347 OPRPNQ99935 248 aaPredicted RBP11.57□□□□□ -0.56
RAPGEF3-220ENST00000549347 CD164L2Q6UWJ8 174 aa11.56□□□□□ -0.56
RAPGEF3-220ENST00000549347 FA2HQ7L5A8 372 aa11.56□□□□□ -0.56
RAPGEF3-220ENST00000549347 TOMM6Q96B49 74 aa11.56□□□□□ -0.56
RAPGEF3-220ENST00000549347 KIAA1109Q2LD37 5005 aa11.55□□□□□ -0.56
RAPGEF3-220ENST00000549347 TRAV13-1A0A0B4J241 112 aa11.55□□□□□ -0.56
RAPGEF3-220ENST00000549347 IGIPA6NJ69 53 aa11.55□□□□□ -0.56
RAPGEF3-220ENST00000549347 PRSS1P07477 247 aa11.55□□□□□ -0.56
RAPGEF3-220ENST00000549347 GCSHP23434 173 aa11.55□□□□□ -0.56
RAPGEF3-220ENST00000549347 C15orf56Q8N910 161 aa11.55□□□□□ -0.56
RAPGEF3-220ENST00000549347 TMEM141Q96I45 108 aa11.55□□□□□ -0.56
RAPGEF3-220ENST00000549347 TIMM17AQ99595 171 aa11.54□□□□□ -0.56
RAPGEF3-220ENST00000549347 LINC01549A6NIU2 74 aa11.53□□□□□ -0.56
RAPGEF3-220ENST00000549347 IFITM10A6NMD0 228 aa11.53□□□□□ -0.56
RAPGEF3-220ENST00000549347 KRTAP10-1P60331 282 aa11.53□□□□□ -0.56
RAPGEF3-220ENST00000549347 CFAP161Q6P656 301 aa11.53□□□□□ -0.56
RAPGEF3-220ENST00000549347 URB1-AS1Q96HZ7 61 aa11.53□□□□□ -0.56
RAPGEF3-220ENST00000549347 AP5S1Q9NUS5 200 aa11.53□□□□□ -0.56
RAPGEF3-220ENST00000549347 APOBP04114 4563 aaKnown RBP11.53□□□□□ -0.56
RAPGEF3-220ENST00000549347 COLCA2A8K830 154 aa11.52□□□□□ -0.57
RAPGEF3-220ENST00000549347 CDK2AP2O75956 126 aa11.52□□□□□ -0.57
RAPGEF3-220ENST00000549347 Q6ZN92 141 aa11.52□□□□□ -0.57
RAPGEF3-220ENST00000549347 TEX43Q6ZNM6 134 aa11.52□□□□□ -0.57
RAPGEF3-220ENST00000549347 AMELXQ99217 191 aa11.52□□□□□ -0.57
RAPGEF3-220ENST00000549347 hDV102S1A0JD36 115 aa11.51□□□□□ -0.57
RAPGEF3-220ENST00000549347 LINC00614P0C842 121 aa11.51□□□□□ -0.57
RAPGEF3-220ENST00000549347 LINC00173Q6ZV60 143 aa11.51□□□□□ -0.57
RAPGEF3-220ENST00000549347 RYR1P21817 5038 aa11.51□□□□□ -0.57
RAPGEF3-220ENST00000549347 GVQW2A0A096LPI5 108 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF3-220ENST00000549347 PAPPA-AS1Q5QFB9 102 aa11.5□□□□□ -0.57
RAPGEF3-220ENST00000549347 ERASQ7Z444 233 aa11.5□□□□□ -0.57
RAPGEF3-220ENST00000549347 C2orf88Q9BSF0 95 aa11.5□□□□□ -0.57
RAPGEF3-220ENST00000549347 IGHV1-58A0A0C4DH39 117 aa11.49□□□□□ -0.57
RAPGEF3-220ENST00000549347 COX7A2LO14548 114 aa11.49□□□□□ -0.57
RAPGEF3-220ENST00000549347 SCO1O75880 301 aa11.49□□□□□ -0.57
RAPGEF3-220ENST00000549347 TRGC2P03986 189 aa11.49□□□□□ -0.57
RAPGEF3-220ENST00000549347 RAB5BP61020 215 aa11.49□□□□□ -0.57
RAPGEF3-220ENST00000549347 CNBPP62633 177 aaKnown RBP11.49□□□□□ -0.57
RAPGEF3-220ENST00000549347 A0A096LNJ9 63 aa11.48□□□□□ -0.57
RAPGEF3-220ENST00000549347 UBE2D1P51668 147 aa11.48□□□□□ -0.57
RAPGEF3-220ENST00000549347 SCGB3A1Q96QR1 104 aa11.48□□□□□ -0.57
RAPGEF3-220ENST00000549347 VCX2Q9H322 139 aa11.48□□□□□ -0.57
RAPGEF3-220ENST00000549347 HERC2O95714 4834 aa11.47□□□□□ -0.57
RAPGEF3-220ENST00000549347 IGHV3OR16-9A0A0B4J2B5 98 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms