RNA–Protein interactions for RNA: ENST00000549287.1

TMEM106C-211, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-211ENST00000549287 LINC00643Q86TS7 51 aa5.52□□□□□ -1.53
TMEM106C-211ENST00000549287 C11orf44Q8N8P7 122 aa5.52□□□□□ -1.53
TMEM106C-211ENST00000549287 IL17DQ8TAD2 202 aa5.52□□□□□ -1.53
TMEM106C-211ENST00000549287 CDC42SE2Q9NRR3 84 aa5.52□□□□□ -1.53
TMEM106C-211ENST00000549287 CDKN2A-AS1Q9UH64 79 aa5.52□□□□□ -1.53
TMEM106C-211ENST00000549287 PRRC2AP48634 2157 aaKnown RBP5.52□□□□□ -1.53
TMEM106C-211ENST00000549287 IGHV3-64A0A075B6Q5 118 aa5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 TRAV8-3A0A0A6YYJ7 113 aa5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 TRBV7-7A0A0K0K1E9 115 aa5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 A0A1B0GX51 115 aa5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 H3BQ85 93 aa5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 RBMY1A1P0DJD3 496 aaKnown RBP5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 RBMY1CP0DJD4 496 aa5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 CXCL5P42830 114 aa5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 NDUFV3P56181 108 aaKnown RBP5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 RBMY1FQ15415 496 aaKnown RBP5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 ADAMTSL4-AS1Q5T5F5 129 aa5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 PRIMA1Q86XR5 153 aa5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 DAND5Q8N907 189 aa5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 MUC7Q8TAX7 377 aa5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 Q9H8V8 135 aa5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 GCN1Q92616 2671 aaKnown RBP5.51□□□□□ -1.53
TMEM106C-211ENST00000549287 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 IGHV3-73A0A0B4J1V6 119 aa5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 IGKV2-29A2NJV5 120 aaPredicted RBP5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 RBMY1BA6NDE4 496 aaKnown RBP5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 RBMY1EA6NEQ0 496 aaKnown RBP5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 CYSRT1A8MQ03 144 aa5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 IBA57-AS1B1ANH7 110 aa5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 RBMY1DP0C7P1 496 aaKnown RBP5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 EDN2P20800 178 aa5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 RPL28P46779 137 aaKnown RBP5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 FHL3Q13643 280 aa5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 C15orf53Q8NAA6 179 aa5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 TMEM126AQ9H061 195 aa5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 C16orf95Q9H693 158 aa5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 ASPMQ8IZT6 3477 aa5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 SPTA1P02549 2419 aa5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 FAM208BQ5VWN6 2430 aa5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 KALRNO60229 2985 aa5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 SPTBN1Q01082 2364 aaKnown RBP5.5□□□□□ -1.53
TMEM106C-211ENST00000549287 IGHV3OR16-12A0A075B7B8 117 aa5.49□□□□□ -1.53
TMEM106C-211ENST00000549287 TRGV1A0A0A0MS02 117 aa5.49□□□□□ -1.53
TMEM106C-211ENST00000549287 A0A1W2PRX2 142 aa5.49□□□□□ -1.53
TMEM106C-211ENST00000549287 CCL24O00175 119 aa5.49□□□□□ -1.53
TMEM106C-211ENST00000549287 ZNF625Q96I27 306 aaPredicted RBP5.49□□□□□ -1.53
TMEM106C-211ENST00000549287 ADGRG4Q8IZF6 3080 aa5.49□□□□□ -1.53
TMEM106C-211ENST00000549287 COL6A6A6NMZ7 2263 aa5.49□□□□□ -1.53
TMEM106C-211ENST00000549287 HIVEP3Q5T1R4 2406 aa5.48□□□□□ -1.53
TMEM106C-211ENST00000549287 TEX49A0A1B0GTD5 131 aa5.48□□□□□ -1.53
TMEM106C-211ENST00000549287 SMIM9A6NGZ8 99 aa5.48□□□□□ -1.53
TMEM106C-211ENST00000549287 SMIM1B2RUZ4 78 aa5.48□□□□□ -1.53
TMEM106C-211ENST00000549287 DNAL4O96015 105 aa5.48□□□□□ -1.53
TMEM106C-211ENST00000549287 BAALC-AS2P0C853 105 aa5.48□□□□□ -1.53
TMEM106C-211ENST00000549287 PROK1P58294 105 aa5.48□□□□□ -1.53
TMEM106C-211ENST00000549287 C10orf99Q6UWK7 81 aa5.48□□□□□ -1.53
TMEM106C-211ENST00000549287 Q6ZSN1 163 aa5.48□□□□□ -1.53
TMEM106C-211ENST00000549287 C1orf158Q8N1D5 194 aa5.48□□□□□ -1.53
TMEM106C-211ENST00000549287 CITED2Q99967 270 aaPredicted RBP5.48□□□□□ -1.53
TMEM106C-211ENST00000549287 DMXL1Q9Y485 3027 aa5.48□□□□□ -1.53
TMEM106C-211ENST00000549287 CRPP02741 224 aa5.47□□□□□ -1.53
TMEM106C-211ENST00000549287 KHDC1LQ5JSQ8 128 aa5.47□□□□□ -1.53
TMEM106C-211ENST00000549287 S100A7L2Q5SY68 101 aa5.47□□□□□ -1.53
TMEM106C-211ENST00000549287 CEMP1Q6PRD7 247 aaPredicted RBP5.47□□□□□ -1.53
TMEM106C-211ENST00000549287 KIR2DL5BQ8NHK3 375 aa5.47□□□□□ -1.53
TMEM106C-211ENST00000549287 COX7B2Q8TF08 81 aa5.47□□□□□ -1.53
TMEM106C-211ENST00000549287 XCL2Q9UBD3 114 aa5.47□□□□□ -1.53
TMEM106C-211ENST00000549287 BOD1L1Q8NFC6 3051 aa5.47□□□□□ -1.53
TMEM106C-211ENST00000549287 MED13LQ71F56 2210 aa5.46□□□□□ -1.54
TMEM106C-211ENST00000549287 TRGV2A0A075B6R0 118 aa5.46□□□□□ -1.54
TMEM106C-211ENST00000549287 TRGV4A0A0C4DH28 118 aa5.46□□□□□ -1.54
TMEM106C-211ENST00000549287 A0A1B0GUV1 79 aa5.46□□□□□ -1.54
TMEM106C-211ENST00000549287 F5H768 121 aa5.46□□□□□ -1.54
TMEM106C-211ENST00000549287 COX6A2Q02221 97 aa5.46□□□□□ -1.54
TMEM106C-211ENST00000549287 COX17Q14061 63 aa5.46□□□□□ -1.54
TMEM106C-211ENST00000549287 ODF3L2Q3SX64 289 aa5.46□□□□□ -1.54
TMEM106C-211ENST00000549287 SDIM1Q6ZPB5 146 aa5.46□□□□□ -1.54
TMEM106C-211ENST00000549287 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.46□□□□□ -1.541e-6■■□□□ 14.5
TMEM106C-211ENST00000549287 LRBAP50851 2863 aa5.45□□□□□ -1.54
TMEM106C-211ENST00000549287 SPTBN2O15020 2390 aa5.45□□□□□ -1.54
TMEM106C-211ENST00000549287 TACC2O95359 2948 aa5.45□□□□□ -1.54
TMEM106C-211ENST00000549287 A0A087WZ39 114 aa5.45□□□□□ -1.54
TMEM106C-211ENST00000549287 TRAV13-1A0A0B4J241 112 aa5.45□□□□□ -1.54
TMEM106C-211ENST00000549287 IGHV3-38A0A0C4DH36 116 aa5.45□□□□□ -1.54
TMEM106C-211ENST00000549287 RNASE1P07998 156 aaKnown RBP5.45□□□□□ -1.54
TMEM106C-211ENST00000549287 SS18Q15532 418 aa5.45□□□□□ -1.54
TMEM106C-211ENST00000549287 Q6ZSV7 163 aa5.45□□□□□ -1.54
TMEM106C-211ENST00000549287 DEFB104AQ8WTQ1 72 aa5.45□□□□□ -1.54
TMEM106C-211ENST00000549287 C19orf73Q9NVV2 129 aa5.45□□□□□ -1.54
TMEM106C-211ENST00000549287 DMXL2Q8TDJ6 3036 aa5.45□□□□□ -1.54
TMEM106C-211ENST00000549287 ABCA2Q9BZC7 2435 aa5.44□□□□□ -1.54
TMEM106C-211ENST00000549287 TRBV6-8A0A0A6YYG3 113 aa5.44□□□□□ -1.54
TMEM106C-211ENST00000549287 JMJD7-PLA2G4BH0Y9G9 81 aa5.44□□□□□ -1.54
TMEM106C-211ENST00000549287 MALP21145 153 aa5.44□□□□□ -1.54
TMEM106C-211ENST00000549287 NTM-AS1Q6ZSK4 140 aa5.44□□□□□ -1.54
TMEM106C-211ENST00000549287 CLEC2BQ92478 149 aa5.44□□□□□ -1.54
TMEM106C-211ENST00000549287 SND1-IT1Q9HBX3 110 aa5.44□□□□□ -1.54
TMEM106C-211ENST00000549287 ZFYVE26Q68DK2 2539 aa5.44□□□□□ -1.54
TMEM106C-211ENST00000549287 HRNRQ86YZ3 2850 aaPredicted RBP5.44□□□□□ -1.54
TMEM106C-211ENST00000549287 ATMQ13315 3056 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms