RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 PAX4O43316 350 aa10.43□□□□□ -0.74
CACNB3-209ENST00000548860 DSCR9P59020 149 aa10.43□□□□□ -0.74
CACNB3-209ENST00000548860 TIMM17AQ99595 171 aa10.43□□□□□ -0.74
CACNB3-209ENST00000548860 CITED2Q99967 270 aaPredicted RBP10.43□□□□□ -0.74
CACNB3-209ENST00000548860 GAGE2BQ13066 116 aa10.42□□□□□ -0.74
CACNB3-209ENST00000548860 ATXN8Q156A1 80 aa10.42□□□□□ -0.74
CACNB3-209ENST00000548860 GAGE2EQ4V326 116 aa10.42□□□□□ -0.74
CACNB3-209ENST00000548860 C1QTNF4Q9BXJ3 329 aa10.42□□□□□ -0.74
CACNB3-209ENST00000548860 GAGE2DQ9UEU5 116 aa10.42□□□□□ -0.74
CACNB3-209ENST00000548860 TEX49A0A1B0GTD5 131 aa10.42□□□□□ -0.74
CACNB3-209ENST00000548860 LEPROTO15243 131 aa10.42□□□□□ -0.74
CACNB3-209ENST00000548860 NFE4Q86UQ8 179 aa10.42□□□□□ -0.74
CACNB3-209ENST00000548860 IGHV4-4A0A075B6R2 117 aa10.42□□□□□ -0.74
CACNB3-209ENST00000548860 A0A0J9YXY3 114 aa10.42□□□□□ -0.74
CACNB3-209ENST00000548860 CCL24O00175 119 aa10.42□□□□□ -0.74
CACNB3-209ENST00000548860 MAP6D1Q9H9H5 199 aa10.42□□□□□ -0.74
CACNB3-209ENST00000548860 GATA3P23771 443 aa10.42□□□□□ -0.74
CACNB3-209ENST00000548860 RBMY1A1P0DJD3 496 aaKnown RBP10.41□□□□□ -0.74
CACNB3-209ENST00000548860 RBMY1CP0DJD4 496 aa10.41□□□□□ -0.74
CACNB3-209ENST00000548860 RBMY1FQ15415 496 aaKnown RBP10.41□□□□□ -0.74
CACNB3-209ENST00000548860 CARD19Q96LW7 228 aa10.41□□□□□ -0.74
CACNB3-209ENST00000548860 SLC25A29Q8N8R3 303 aa10.41□□□□□ -0.74
CACNB3-209ENST00000548860 LOC100131303A0A0U1RQF7 123 aa10.41□□□□□ -0.74
CACNB3-209ENST00000548860 RHOHQ15669 191 aa10.41□□□□□ -0.74
CACNB3-209ENST00000548860 F8P00451 2351 aa10.41□□□□□ -0.74
CACNB3-209ENST00000548860 TEP1Q99973 2627 aaKnown RBP10.41□□□□□ -0.74
CACNB3-209ENST00000548860 UBR5O95071 2799 aaPredicted RBP10.4□□□□□ -0.74
CACNB3-209ENST00000548860 IGLV10-54A0A075B6I4 117 aa10.4□□□□□ -0.74
CACNB3-209ENST00000548860 CRLF1O75462 422 aa10.4□□□□□ -0.74
CACNB3-209ENST00000548860 DNAL4O96015 105 aa10.4□□□□□ -0.74
CACNB3-209ENST00000548860 TRBV27A0A0K0K1C4 114 aa10.4□□□□□ -0.75
CACNB3-209ENST00000548860 IGHV3-30P01768 117 aa10.39□□□□□ -0.75
CACNB3-209ENST00000548860 IGHV3-30-5P0DP03 117 aa10.39□□□□□ -0.75
CACNB3-209ENST00000548860 LINC00315P59091 139 aa10.39□□□□□ -0.75
CACNB3-209ENST00000548860 ZFAND6Q6FIF0 208 aa10.39□□□□□ -0.75
CACNB3-209ENST00000548860 TEN1Q86WV5 123 aa10.39□□□□□ -0.75
CACNB3-209ENST00000548860 IGHV4-31P0DP07 118 aa10.38□□□□□ -0.75
CACNB3-209ENST00000548860 XCL1P47992 114 aa10.38□□□□□ -0.75
CACNB3-209ENST00000548860 ZNF702PQ9H963 129 aa10.38□□□□□ -0.75
CACNB3-209ENST00000548860 LGALS9O00182 355 aa10.38□□□□□ -0.75
CACNB3-209ENST00000548860 DEFB113Q30KQ7 82 aa10.38□□□□□ -0.75
CACNB3-209ENST00000548860 KIF25-AS1Q9Y6Z4 181 aa10.38□□□□□ -0.75
CACNB3-209ENST00000548860 MXRA5Q9NR99 2828 aa10.38□□□□□ -0.75
CACNB3-209ENST00000548860 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
CACNB3-209ENST00000548860 LINC01620Q4KN68 170 aa10.37□□□□□ -0.75
CACNB3-209ENST00000548860 PIK3CD-AS1Q5SR53 167 aa10.37□□□□□ -0.75
CACNB3-209ENST00000548860 C6orf226Q5I0X4 101 aa10.37□□□□□ -0.75
CACNB3-209ENST00000548860 BBC3Q96PG8 261 aaPredicted RBP10.37□□□□□ -0.75
CACNB3-209ENST00000548860 UBE2WQ96B02 151 aa10.37□□□□□ -0.75
CACNB3-209ENST00000548860 TRIAP1O43715 76 aa10.36□□□□□ -0.75
CACNB3-209ENST00000548860 MED14OSP0DP75 135 aa10.36□□□□□ -0.75
CACNB3-209ENST00000548860 ADAMTSL4-AS1Q5T5F5 129 aa10.36□□□□□ -0.75
CACNB3-209ENST00000548860 CFAP126Q5VTH2 177 aa10.36□□□□□ -0.75
CACNB3-209ENST00000548860 POM121L12Q8N7R1 296 aa10.36□□□□□ -0.75
CACNB3-209ENST00000548860 Q9HAA7 133 aa10.36□□□□□ -0.75
CACNB3-209ENST00000548860 C15orf53Q8NAA6 179 aa10.36□□□□□ -0.75
CACNB3-209ENST00000548860 C9orf85Q96MD7 179 aa10.36□□□□□ -0.75
CACNB3-209ENST00000548860 IGHV3-33P01772 117 aa10.35□□□□□ -0.75
CACNB3-209ENST00000548860 ICOSQ9Y6W8 199 aa10.35□□□□□ -0.75
CACNB3-209ENST00000548860 RBMY1BA6NDE4 496 aaKnown RBP10.35□□□□□ -0.75
CACNB3-209ENST00000548860 RBMY1EA6NEQ0 496 aaKnown RBP10.35□□□□□ -0.75
CACNB3-209ENST00000548860 RBMY1DP0C7P1 496 aaKnown RBP10.35□□□□□ -0.75
CACNB3-209ENST00000548860 XGP55808 180 aa10.35□□□□□ -0.75
CACNB3-209ENST00000548860 DEFB114Q30KQ6 69 aa10.35□□□□□ -0.75
CACNB3-209ENST00000548860 GAGE2AQ6NT46 116 aa10.35□□□□□ -0.75
CACNB3-209ENST00000548860 ITPR2Q14571 2701 aa10.35□□□□□ -0.75
CACNB3-209ENST00000548860 IGHV1-58A0A0C4DH39 117 aa10.34□□□□□ -0.75
CACNB3-209ENST00000548860 Q6YL49 198 aa10.34□□□□□ -0.75
CACNB3-209ENST00000548860 LINC00694P0DN24 101 aa10.34□□□□□ -0.75
CACNB3-209ENST00000548860 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
CACNB3-209ENST00000548860 SMR3AQ99954 134 aa10.33□□□□□ -0.76
CACNB3-209ENST00000548860 RNF183Q96D59 192 aa10.33□□□□□ -0.76
CACNB3-209ENST00000548860 VSIG2Q96IQ7 327 aa10.33□□□□□ -0.76
CACNB3-209ENST00000548860 NIPBLQ6KC79 2804 aaeCLIP10.33□□□□□ -0.76
CACNB3-209ENST00000548860 DNAJC9-AS1A6NH13 148 aa10.32□□□□□ -0.76
CACNB3-209ENST00000548860 CRPP02741 224 aa10.32□□□□□ -0.76
CACNB3-209ENST00000548860 SMCPP49901 116 aaPredicted RBP10.32□□□□□ -0.76
CACNB3-209ENST00000548860 TINCRA0A1B0GVN0 87 aa10.32□□□□□ -0.76
CACNB3-209ENST00000548860 ATP5G1P05496 136 aa10.32□□□□□ -0.76
CACNB3-209ENST00000548860 COX6A2Q02221 97 aa10.32□□□□□ -0.76
CACNB3-209ENST00000548860 SETXQ7Z333 2677 aaKnown RBP10.32□□□□□ -0.76
CACNB3-209ENST00000548860 J3QLI3 93 aa10.31□□□□□ -0.76
CACNB3-209ENST00000548860 UBE2D1P51668 147 aa10.31□□□□□ -0.76
CACNB3-209ENST00000548860 MALP21145 153 aa10.3□□□□□ -0.76
CACNB3-209ENST00000548860 LINC00482Q8N8I6 264 aa10.29□□□□□ -0.76
CACNB3-209ENST00000548860 ODF3L2Q3SX64 289 aa10.29□□□□□ -0.76
CACNB3-209ENST00000548860 SPANXA1Q9NS26 97 aa10.29□□□□□ -0.76
CACNB3-209ENST00000548860 MIR7-3HGQ8N6C7 128 aa10.28□□□□□ -0.76
CACNB3-209ENST00000548860 TRBV6-5A0A0K0K1A5 114 aa10.28□□□□□ -0.76
CACNB3-209ENST00000548860 K7EQD1 137 aa10.28□□□□□ -0.76
CACNB3-209ENST00000548860 LINC00526Q96FQ7 95 aa10.28□□□□□ -0.76
CACNB3-209ENST00000548860 HERVK_113P63121 156 aa10.27□□□□□ -0.76
CACNB3-209ENST00000548860 UBE2D4Q9Y2X8 147 aa10.27□□□□□ -0.76
CACNB3-209ENST00000548860 EIF4EBP3O60516 100 aaPredicted RBP10.27□□□□□ -0.77
CACNB3-209ENST00000548860 MGAM2Q2M2H8 2515 aa10.27□□□□□ -0.77
CACNB3-209ENST00000548860 TRAV4A0A0B4J268 109 aa10.26□□□□□ -0.77
CACNB3-209ENST00000548860 GYPEP15421 78 aa10.26□□□□□ -0.77
CACNB3-209ENST00000548860 TMEM89A2RUT3 159 aa10.26□□□□□ -0.77
CACNB3-209ENST00000548860 F5H768 121 aa10.26□□□□□ -0.77
CACNB3-209ENST00000548860 BAALC-AS2P0C853 105 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms