RNA–Protein interactions for RNA: ENST00000548399.1

PRPF40B-207, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-207ENST00000548399 MIAQ16674 131 aa9.18□□□□□ -0.94
PRPF40B-207ENST00000548399 LINC00269Q8N2A0 174 aa9.18□□□□□ -0.94
PRPF40B-207ENST00000548399 Q8N8P6 123 aa9.18□□□□□ -0.94
PRPF40B-207ENST00000548399 A0A1B0GUV1 79 aa9.17□□□□□ -0.94
PRPF40B-207ENST00000548399 CLPSL2Q6UWE3 100 aa9.17□□□□□ -0.94
PRPF40B-207ENST00000548399 BAGE3Q86Y29 109 aa9.17□□□□□ -0.94
PRPF40B-207ENST00000548399 Q8N814 137 aa9.17□□□□□ -0.94
PRPF40B-207ENST00000548399 KIR2DL4Q99706 377 aa9.17□□□□□ -0.94
PRPF40B-207ENST00000548399 PRR34Q9NV39 138 aa9.17□□□□□ -0.94
PRPF40B-207ENST00000548399 DNAH11Q96DT5 4516 aa9.17□□□□□ -0.94
PRPF40B-207ENST00000548399 TCAPO15273 167 aa9.16□□□□□ -0.94
PRPF40B-207ENST00000548399 TSHBP01222 138 aa9.16□□□□□ -0.94
PRPF40B-207ENST00000548399 FUSP35637 526 aaKnown RBP eCLIP9.16□□□□□ -0.94
PRPF40B-207ENST00000548399 AMMECR1LQ6DCA0 310 aa9.16□□□□□ -0.94
PRPF40B-207ENST00000548399 FA2HQ7L5A8 372 aa9.16□□□□□ -0.94
PRPF40B-207ENST00000548399 MAPKAPK5-AS1Q8N8E1 139 aa9.16□□□□□ -0.94
PRPF40B-207ENST00000548399 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
PRPF40B-207ENST00000548399 NTN5Q8WTR8 489 aaPredicted RBP9.16□□□□□ -0.94
PRPF40B-207ENST00000548399 BAALCQ8WXS3 180 aa9.16□□□□□ -0.94
PRPF40B-207ENST00000548399 IGLV4-60A0A075B6I1 120 aa9.15□□□□□ -0.94
PRPF40B-207ENST00000548399 H7C423 109 aa9.15□□□□□ -0.94
PRPF40B-207ENST00000548399 K7EMI3 77 aa9.15□□□□□ -0.94
PRPF40B-207ENST00000548399 LECT2O14960 151 aa9.15□□□□□ -0.94
PRPF40B-207ENST00000548399 LINC00614P0C842 121 aa9.15□□□□□ -0.94
PRPF40B-207ENST00000548399 REG3AQ06141 175 aa9.15□□□□□ -0.94
PRPF40B-207ENST00000548399 WFDC2Q14508 124 aa9.15□□□□□ -0.94
PRPF40B-207ENST00000548399 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.14□□□□□ -0.95
PRPF40B-207ENST00000548399 IGLV5-52A0A0A0MRZ9 124 aa9.14□□□□□ -0.95
PRPF40B-207ENST00000548399 IGKV2-29A2NJV5 120 aaPredicted RBP9.14□□□□□ -0.95
PRPF40B-207ENST00000548399 LINC01546A6NGU7 62 aa9.14□□□□□ -0.95
PRPF40B-207ENST00000548399 FCER1GP30273 86 aa9.14□□□□□ -0.95
PRPF40B-207ENST00000548399 NDUFA6P56556 154 aa9.14□□□□□ -0.95
PRPF40B-207ENST00000548399 RNASEKQ6P5S7 137 aaKnown RBP9.14□□□□□ -0.95
PRPF40B-207ENST00000548399 CHCHD1Q96BP2 118 aaKnown RBP9.14□□□□□ -0.95
PRPF40B-207ENST00000548399 AP5S1Q9NUS5 200 aa9.14□□□□□ -0.95
PRPF40B-207ENST00000548399 CDK2AP2O75956 126 aa9.13□□□□□ -0.95
PRPF40B-207ENST00000548399 FGF6P10767 208 aa9.13□□□□□ -0.95
PRPF40B-207ENST00000548399 ORMDL2Q53FV1 153 aa9.13□□□□□ -0.95
PRPF40B-207ENST00000548399 COA6Q5JTJ3 125 aaKnown RBP9.13□□□□□ -0.95
PRPF40B-207ENST00000548399 URB1-AS1Q96HZ7 61 aa9.13□□□□□ -0.95
PRPF40B-207ENST00000548399 KIAA1109Q2LD37 5005 aa9.12□□□□□ -0.95
PRPF40B-207ENST00000548399 TRAV8-4A0A0B4J246 113 aa9.12□□□□□ -0.95
PRPF40B-207ENST00000548399 SERF1AO75920 110 aa9.12□□□□□ -0.95
PRPF40B-207ENST00000548399 S100A6P06703 90 aa9.12□□□□□ -0.95
PRPF40B-207ENST00000548399 ESDP10768 282 aa9.12□□□□□ -0.95
PRPF40B-207ENST00000548399 ZNF25P17030 456 aaPredicted RBP9.12□□□□□ -0.95
PRPF40B-207ENST00000548399 GCSHP23434 173 aa9.12□□□□□ -0.95
PRPF40B-207ENST00000548399 DYNC1H1Q14204 4646 aaKnown RBP9.12□□□□□ -0.95
PRPF40B-207ENST00000548399 IGLV10-54A0A075B6I4 117 aa9.11□□□□□ -0.95
PRPF40B-207ENST00000548399 LINC00310P59036 64 aa9.11□□□□□ -0.95
PRPF40B-207ENST00000548399 TMEM101Q96IK0 257 aa9.11□□□□□ -0.95
PRPF40B-207ENST00000548399 TMA7Q9Y2S6 64 aaKnown RBP9.11□□□□□ -0.95
PRPF40B-207ENST00000548399 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.1□□□□□ -0.95
PRPF40B-207ENST00000548399 HSBP1O75506 76 aa9.1□□□□□ -0.95
PRPF40B-207ENST00000548399 G0S2P27469 103 aa9.1□□□□□ -0.95
PRPF40B-207ENST00000548399 C14orf177Q52M58 125 aa9.1□□□□□ -0.95
PRPF40B-207ENST00000548399 OR5A1Q8NGJ0 315 aa9.1□□□□□ -0.95
PRPF40B-207ENST00000548399 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
PRPF40B-207ENST00000548399 NUPR1O60356 82 aa9.09□□□□□ -0.95
PRPF40B-207ENST00000548399 KRTAP10-1P60331 282 aa9.09□□□□□ -0.95
PRPF40B-207ENST00000548399 KRTAP26-1Q6PEX3 210 aa9.09□□□□□ -0.95
PRPF40B-207ENST00000548399 MRPL52Q86TS9 123 aaKnown RBP9.09□□□□□ -0.95
PRPF40B-207ENST00000548399 USP17L23D6RBM5 183 aa9.08□□□□□ -0.96
PRPF40B-207ENST00000548399 SMAGPQ0VAQ4 97 aa9.08□□□□□ -0.96
PRPF40B-207ENST00000548399 TMEM18Q96B42 140 aa9.08□□□□□ -0.96
PRPF40B-207ENST00000548399 LINC01549A6NIU2 74 aa9.07□□□□□ -0.96
PRPF40B-207ENST00000548399 DGAT2L7PQ6IED9 249 aa9.07□□□□□ -0.96
PRPF40B-207ENST00000548399 C2orf66Q6UXQ4 117 aa9.07□□□□□ -0.96
PRPF40B-207ENST00000548399 CYSLTR1Q9Y271 337 aa9.07□□□□□ -0.96
PRPF40B-207ENST00000548399 C5orf52A6NGY3 159 aa9.06□□□□□ -0.96
PRPF40B-207ENST00000548399 HBDP02042 147 aa9.06□□□□□ -0.96
PRPF40B-207ENST00000548399 SNRPEP62304 92 aaKnown RBP9.06□□□□□ -0.96
PRPF40B-207ENST00000548399 PMCHL1Q16048 86 aa9.06□□□□□ -0.96
PRPF40B-207ENST00000548399 FAM19A2Q8N3H0 131 aa9.06□□□□□ -0.96
PRPF40B-207ENST00000548399 TOMM6Q96B49 74 aa9.06□□□□□ -0.96
PRPF40B-207ENST00000548399 HERC2O95714 4834 aa9.06□□□□□ -0.96
PRPF40B-207ENST00000548399 A0A096LNJ9 63 aa9.05□□□□□ -0.96
PRPF40B-207ENST00000548399 ZNF664Q8N3J9 261 aa9.05□□□□□ -0.96
PRPF40B-207ENST00000548399 CDC42SE2Q9NRR3 84 aa9.05□□□□□ -0.96
PRPF40B-207ENST00000548399 CSDC2Q9Y534 153 aaKnown RBP9.05□□□□□ -0.96
PRPF40B-207ENST00000548399 GAGE12HA6NDE8 117 aa9.04□□□□□ -0.96
PRPF40B-207ENST00000548399 S100A2P29034 98 aa9.04□□□□□ -0.96
PRPF40B-207ENST00000548399 RPL39P62891 51 aaKnown RBP9.04□□□□□ -0.96
PRPF40B-207ENST00000548399 PDZD11Q5EBL8 140 aa9.04□□□□□ -0.96
PRPF40B-207ENST00000548399 HIST3H2BBQ8N257 126 aa9.04□□□□□ -0.96
PRPF40B-207ENST00000548399 CHCHD10Q8WYQ3 142 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-207ENST00000548399 TIMM21Q9BVV7 248 aa9.04□□□□□ -0.96
PRPF40B-207ENST00000548399 UBE2D4Q9Y2X8 147 aa9.04□□□□□ -0.96
PRPF40B-207ENST00000548399 LRP1BQ9NZR2 4599 aa9.04□□□□□ -0.96
PRPF40B-207ENST00000548399 PRSS1P07477 247 aa9.03□□□□□ -0.96
PRPF40B-207ENST00000548399 PACRGQ96M98 296 aaPredicted RBP9.03□□□□□ -0.96
PRPF40B-207ENST00000548399 SPANXA1Q9NS26 97 aa9.03□□□□□ -0.96
PRPF40B-207ENST00000548399 LINC00959A0A1B0GUT2 108 aa9.02□□□□□ -0.97
PRPF40B-207ENST00000548399 XCL1P47992 114 aa9.02□□□□□ -0.97
PRPF40B-207ENST00000548399 SS18Q15532 418 aa9.02□□□□□ -0.97
PRPF40B-207ENST00000548399 ERASQ7Z444 233 aa9.02□□□□□ -0.97
PRPF40B-207ENST00000548399 SCGB3A1Q96QR1 104 aa9.02□□□□□ -0.97
PRPF40B-207ENST00000548399 PYGO1Q9Y3Y4 419 aa9.02□□□□□ -0.97
PRPF40B-207ENST00000548399 hDV102S1A0JD36 115 aa9.01□□□□□ -0.97
PRPF40B-207ENST00000548399 IGIPA6NJ69 53 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms