RNA–Protein interactions for RNA: ENST00000548122.2

PTPRB-206, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-206ENST00000548122 WFDC9Q8NEX5 89 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 CLEC2BQ92478 149 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 Q9H3A6 140 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 U3KQK5 164 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 LOC107984640A0A0U1RRK4 108 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 WI2-2373I1.2A0A1W2PRP0 233 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 DSCAML1Q8TD84 2053 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 A0A0B4J2C4 111 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 SOSTDC1Q6X4U4 206 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 UBE2DNLQ8IWF7 75 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 NRACQ8N912 160 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 TOMM6Q96B49 74 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 IFI27L1Q96BM0 104 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 M0R381 172 aa4.15□□□□□ -1.74
PTPRB-206ENST00000548122 IGLV1-51P01701 117 aa4.15□□□□□ -1.74
PTPRB-206ENST00000548122 TMEM170BQ5T4T1 132 aa4.15□□□□□ -1.74
PTPRB-206ENST00000548122 TMEM254Q8TBM7 123 aa4.15□□□□□ -1.74
PTPRB-206ENST00000548122 Q9UF83 564 aa4.15□□□□□ -1.74
PTPRB-206ENST00000548122 TP53TG1Q9Y2A0 90 aa4.15□□□□□ -1.74
PTPRB-206ENST00000548122 PAX4O43316 350 aa4.15□□□□□ -1.75
PTPRB-206ENST00000548122 EIF4EBP1Q13541 118 aaPredicted RBP4.15□□□□□ -1.75
PTPRB-206ENST00000548122 PIK3CD-AS1Q5SR53 167 aa4.15□□□□□ -1.75
PTPRB-206ENST00000548122 CDIP1Q9H305 208 aa4.15□□□□□ -1.75
PTPRB-206ENST00000548122 NOTCH1P46531 2555 aa4.15□□□□□ -1.75
PTPRB-206ENST00000548122 WFDC2Q14508 124 aa4.15□□□□□ -1.75
PTPRB-206ENST00000548122 HBDP02042 147 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 ORMDL3Q8N138 153 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 VGLL1Q99990 258 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 C11orf1Q9H5F2 150 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 K7EMI3 77 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 IGKV1-17P01599 117 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 PLEKHB2Q96CS7 222 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 SHANK2-AS3Q9BTD1 123 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 TMEM14CQ9P0S9 112 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 PMS2P5A8MQ11 134 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 H3BT86 120 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 SPATA12Q7Z6I5 190 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 WFDC10AQ9H1F0 79 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 PHLDA3Q9Y5J5 127 aa4.14□□□□□ -1.75
PTPRB-206ENST00000548122 A0A1B0GX51 115 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 SMIM27A0A1W2PRY6 76 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 D6R8Y8 96 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 INSP01308 110 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 IFI27P40305 119 aaPredicted RBP4.13□□□□□ -1.75
PTPRB-206ENST00000548122 C12orf74Q32Q52 190 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 IGFL4Q6B9Z1 124 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 MUSTN1Q8IVN3 82 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 SCRT2Q9NQ03 307 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 ADARB2-AS1A8MUL3 147 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 C3orf22Q8N5N4 141 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 KLK5Q9Y337 293 aaPredicted RBP4.13□□□□□ -1.75
PTPRB-206ENST00000548122 TRAV12-2A0A075B6T6 113 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 PCP2Q8IVA1 136 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 TMEM75Q8N9X5 138 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 TRGV2A0A075B6R0 118 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 IGKCP01834 107 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 ATP5EP56381 51 aaPredicted RBP4.13□□□□□ -1.75
PTPRB-206ENST00000548122 ZC2HC1BQ5TFG8 222 aa4.13□□□□□ -1.75
PTPRB-206ENST00000548122 CELSR1Q9NYQ6 3014 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 ATXN8Q156A1 80 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 C2orf82Q6UX34 121 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 MAP6D1Q9H9H5 199 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 K7EIL1 84 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 CDK2AP2O75956 126 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 DEFB130BP0DP73 79 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 DEFB130AP0DP74 79 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 SPINK13Q1W4C9 94 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 MRPL36Q9P0J6 103 aaKnown RBP4.12□□□□□ -1.75
PTPRB-206ENST00000548122 ZNF492Q9P255 531 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 IGHV4-4A0A075B6R2 117 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 IGLL5B9A064 214 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 DEFB4AO15263 64 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 CRPP02741 224 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 PRM2P04554 102 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 MGPP08493 103 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 B9D2Q9BPU9 175 aa4.12□□□□□ -1.75
PTPRB-206ENST00000548122 C11orf52Q96A22 123 aa4.11□□□□□ -1.75
PTPRB-206ENST00000548122 GFRA4Q9GZZ7 299 aa4.11□□□□□ -1.75
PTPRB-206ENST00000548122 A0A0J9YXY3 114 aa4.11□□□□□ -1.75
PTPRB-206ENST00000548122 RNASE4P34096 147 aaKnown RBP4.11□□□□□ -1.75
PTPRB-206ENST00000548122 REG3GQ6UW15 175 aa4.11□□□□□ -1.75
PTPRB-206ENST00000548122 TTTY13Q9BZ97 58 aa4.11□□□□□ -1.75
PTPRB-206ENST00000548122 TCL1BO95988 128 aa4.11□□□□□ -1.75
PTPRB-206ENST00000548122 ARMS2P0C7Q2 107 aa4.11□□□□□ -1.75
PTPRB-206ENST00000548122 WWC2-AS2Q96NR7 200 aa4.11□□□□□ -1.75
PTPRB-206ENST00000548122 ZFHX3Q15911 3703 aa4.11□□□□□ -1.75
PTPRB-206ENST00000548122 H3BRN7 92 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 CHKB-CPT1BH3BT56 60 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 SLC25A20O43772 301 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 FXYD2P54710 66 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 KRTAP10-11P60412 298 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 C11orf45Q8TAV5 145 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 C20orf78Q9BR46 151 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 MSRB1Q9NZV6 116 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 H3BMM0 161 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 P0C879 139 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 C2orf91Q6ZV80 131 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 RETNLBQ9BQ08 111 aa4.1□□□□□ -1.75
PTPRB-206ENST00000548122 DKK2Q9UBU2 259 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms