RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 IGLV4-69A0A075B6H9 119 aa8.1□□□□□ -1.11
CCDC59-202ENST00000547758 FXYD6-FXYD2A0A087WZ82 144 aa8.1□□□□□ -1.11
CCDC59-202ENST00000547758 APOMO95445 188 aa8.1□□□□□ -1.11
CCDC59-202ENST00000547758 RPL35P42766 123 aaKnown RBP8.1□□□□□ -1.11
CCDC59-202ENST00000547758 SRSF3P84103 164 aaKnown RBP8.1□□□□□ -1.11
CCDC59-202ENST00000547758 GATD1Q8NB37 220 aa8.1□□□□□ -1.11
CCDC59-202ENST00000547758 NUP35Q8NFH5 326 aa8.1□□□□□ -1.11
CCDC59-202ENST00000547758 BTF3L4Q96K17 158 aa8.1□□□□□ -1.11
CCDC59-202ENST00000547758 A0A1B0GV50 99 aa8.09□□□□□ -1.11
CCDC59-202ENST00000547758 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.09□□□□□ -1.11
CCDC59-202ENST00000547758 KRTAP1-4P0C5Y4 121 aa8.09□□□□□ -1.11
CCDC59-202ENST00000547758 MEF2BQ02080 365 aaPredicted RBP8.09□□□□□ -1.11
CCDC59-202ENST00000547758 RPL18AQ02543 176 aaKnown RBP8.09□□□□□ -1.11
CCDC59-202ENST00000547758 SS18Q15532 418 aa8.09□□□□□ -1.11
CCDC59-202ENST00000547758 CD164L2Q6UWJ8 174 aa8.09□□□□□ -1.11
CCDC59-202ENST00000547758 LYZL1Q6UWQ5 148 aa8.09□□□□□ -1.11
CCDC59-202ENST00000547758 TMEM101Q96IK0 257 aa8.09□□□□□ -1.11
CCDC59-202ENST00000547758 XKRY2A2RUG3 117 aa8.08□□□□□ -1.12
CCDC59-202ENST00000547758 C19orf71A6NCJ1 209 aa8.08□□□□□ -1.12
CCDC59-202ENST00000547758 UBE2D1P51668 147 aa8.08□□□□□ -1.12
CCDC59-202ENST00000547758 EIF5AP63241 154 aaKnown RBP8.08□□□□□ -1.12
CCDC59-202ENST00000547758 SFT2D1Q8WV19 159 aa8.08□□□□□ -1.12
CCDC59-202ENST00000547758 RPL39LQ96EH5 51 aaKnown RBP8.08□□□□□ -1.12
CCDC59-202ENST00000547758 CAMK2N2Q96S95 79 aa8.08□□□□□ -1.12
CCDC59-202ENST00000547758 TRAV1-1A0A0B4J248 108 aa8.07□□□□□ -1.12
CCDC59-202ENST00000547758 IFNA1P01562 189 aa8.07□□□□□ -1.12
CCDC59-202ENST00000547758 GIPP09681 153 aaPredicted RBP8.07□□□□□ -1.12
CCDC59-202ENST00000547758 RPL13AP40429 203 aaKnown RBP8.07□□□□□ -1.12
CCDC59-202ENST00000547758 CENPWQ5EE01 88 aa8.07□□□□□ -1.12
CCDC59-202ENST00000547758 EIF5AL1Q6IS14 154 aaKnown RBP8.07□□□□□ -1.12
CCDC59-202ENST00000547758 MBD3L1Q8WWY6 194 aa8.07□□□□□ -1.12
CCDC59-202ENST00000547758 A0A087WZ39 114 aa8.06□□□□□ -1.12
CCDC59-202ENST00000547758 SDHAF1A6NFY7 115 aa8.06□□□□□ -1.12
CCDC59-202ENST00000547758 MALP21145 153 aa8.06□□□□□ -1.12
CCDC59-202ENST00000547758 TWIST1Q15672 202 aa8.06□□□□□ -1.12
CCDC59-202ENST00000547758 KCNRGQ8N5I3 272 aa8.06□□□□□ -1.12
CCDC59-202ENST00000547758 CYTL1Q9NRR1 136 aa8.06□□□□□ -1.12
CCDC59-202ENST00000547758 MUC17Q685J3 4493 aa8.05□□□□□ -1.12
CCDC59-202ENST00000547758 BCL2L11O43521 198 aa8.05□□□□□ -1.12
CCDC59-202ENST00000547758 CTRLP40313 264 aa8.05□□□□□ -1.12
CCDC59-202ENST00000547758 KRTAP11-1Q8IUC1 163 aa8.05□□□□□ -1.12
CCDC59-202ENST00000547758 C9orf62Q8N4C0 152 aa8.05□□□□□ -1.12
CCDC59-202ENST00000547758 FAM213BQ8TBF2 198 aa8.05□□□□□ -1.12
CCDC59-202ENST00000547758 TSKUQ8WUA8 353 aa8.05□□□□□ -1.12
CCDC59-202ENST00000547758 I3L3M4 83 aa8.04□□□□□ -1.12
CCDC59-202ENST00000547758 C11orf52Q96A22 123 aa8.04□□□□□ -1.12
CCDC59-202ENST00000547758 C2orf48Q96LS8 159 aa8.04□□□□□ -1.12
CCDC59-202ENST00000547758 OPRPNQ99935 248 aaPredicted RBP8.04□□□□□ -1.12
CCDC59-202ENST00000547758 CNFNQ9BYD5 112 aa8.04□□□□□ -1.12
CCDC59-202ENST00000547758 CDC42SE2Q9NRR3 84 aa8.04□□□□□ -1.12
CCDC59-202ENST00000547758 COX7A2LO14548 114 aa8.03□□□□□ -1.12
CCDC59-202ENST00000547758 ESDP10768 282 aa8.03□□□□□ -1.12
CCDC59-202ENST00000547758 PMCHP20382 165 aa8.03□□□□□ -1.12
CCDC59-202ENST00000547758 MRAP2Q96G30 205 aa8.03□□□□□ -1.12
CCDC59-202ENST00000547758 TEX261Q6UWH6 196 aa8.02□□□□□ -1.13
CCDC59-202ENST00000547758 MRPL52Q86TS9 123 aaKnown RBP8.02□□□□□ -1.13
CCDC59-202ENST00000547758 SMIM12Q96EX1 92 aa8.02□□□□□ -1.13
CCDC59-202ENST00000547758 FAM168BA1KXE4 195 aa8.01□□□□□ -1.13
CCDC59-202ENST00000547758 C1orf196B1AJZ1 125 aa8.01□□□□□ -1.13
CCDC59-202ENST00000547758 UMAD1C9J7I0 102 aa8.01□□□□□ -1.13
CCDC59-202ENST00000547758 TSHBP01222 138 aa8.01□□□□□ -1.13
CCDC59-202ENST00000547758 GNG4P50150 75 aa8.01□□□□□ -1.13
CCDC59-202ENST00000547758 RNF151Q2KHN1 245 aa8.01□□□□□ -1.13
CCDC59-202ENST00000547758 ANKRD39Q53RE8 183 aa8.01□□□□□ -1.13
CCDC59-202ENST00000547758 RAB19A4D1S5 217 aa8□□□□□ -1.13
CCDC59-202ENST00000547758 ARPC5O15511 151 aa8□□□□□ -1.13
CCDC59-202ENST00000547758 TSPAN13O95857 204 aa8□□□□□ -1.13
CCDC59-202ENST00000547758 CCL20P78556 96 aa8□□□□□ -1.13
CCDC59-202ENST00000547758 SPAG11BQ08648 103 aa8□□□□□ -1.13
CCDC59-202ENST00000547758 SMIM15Q7Z3B0 74 aa8□□□□□ -1.13
CCDC59-202ENST00000547758 TMEM242Q9NWH2 141 aa8□□□□□ -1.13
CCDC59-202ENST00000547758 CARHSP1Q9Y2V2 147 aaKnown RBP8□□□□□ -1.13
CCDC59-202ENST00000547758 TRBV6-5A0A0K0K1A5 114 aa7.99□□□□□ -1.13
CCDC59-202ENST00000547758 G3V3Q6 166 aa7.99□□□□□ -1.13
CCDC59-202ENST00000547758 FOXA3P55318 350 aaPredicted RBP7.99□□□□□ -1.13
CCDC59-202ENST00000547758 FAM19A5Q7Z5A7 132 aaPredicted RBP7.99□□□□□ -1.13
CCDC59-202ENST00000547758 MANBALQ9NQG1 85 aa7.99□□□□□ -1.13
CCDC59-202ENST00000547758 BIN3Q9NQY0 253 aa7.99□□□□□ -1.13
CCDC59-202ENST00000547758 GNG13Q9P2W3 67 aa7.99□□□□□ -1.13
CCDC59-202ENST00000547758 C5orf38Q86SI9 138 aa7.98□□□□□ -1.13
CCDC59-202ENST00000547758 NUDT10Q8NFP7 164 aa7.98□□□□□ -1.13
CCDC59-202ENST00000547758 NUDT11Q96G61 164 aa7.98□□□□□ -1.13
CCDC59-202ENST00000547758 FAM210AQ96ND0 272 aa7.98□□□□□ -1.13
CCDC59-202ENST00000547758 MRPL35Q9NZE8 188 aaKnown RBP7.98□□□□□ -1.13
CCDC59-202ENST00000547758 TRBV20OR9-2A0A075B6H5 130 aa7.97□□□□□ -1.13
CCDC59-202ENST00000547758 C7orf77A4D0Y5 90 aa7.97□□□□□ -1.13
CCDC59-202ENST00000547758 UBE2BP63146 152 aa7.97□□□□□ -1.13
CCDC59-202ENST00000547758 IMMP2LQ96T52 175 aa7.97□□□□□ -1.13
CCDC59-202ENST00000547758 RNASE7Q9H1E1 156 aaKnown RBP7.97□□□□□ -1.13
CCDC59-202ENST00000547758 TRAV13-1A0A0B4J241 112 aa7.96□□□□□ -1.14
CCDC59-202ENST00000547758 RNASE13Q5GAN3 156 aaKnown RBP7.96□□□□□ -1.14
CCDC59-202ENST00000547758 OR10D4PQ8NGN7 298 aa7.96□□□□□ -1.14
CCDC59-202ENST00000547758 RPP21Q9H633 154 aaKnown RBP7.96□□□□□ -1.14
CCDC59-202ENST00000547758 ST20Q9HBF5 79 aa7.96□□□□□ -1.14
CCDC59-202ENST00000547758 M0QXV9 152 aa7.95□□□□□ -1.14
CCDC59-202ENST00000547758 KRTAP7-1Q8IUC3 87 aa7.95□□□□□ -1.14
CCDC59-202ENST00000547758 TLX1NBP0CAT3 122 aa7.94□□□□□ -1.14
CCDC59-202ENST00000547758 POLR2KP53803 58 aaKnown RBP7.94□□□□□ -1.14
CCDC59-202ENST00000547758 CSDC2Q9Y534 153 aaKnown RBP7.94□□□□□ -1.14
CCDC59-202ENST00000547758 FSIP2Q5CZC0 6907 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms