RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 SPANXA1Q9NS26 97 aa15.51■□□□□ 0.07
SMARCD1-203ENST00000547247 C2orf66Q6UXQ4 117 aa15.5■□□□□ 0.07
SMARCD1-203ENST00000547247 TM2D2Q9BX73 214 aa15.5■□□□□ 0.07
SMARCD1-203ENST00000547247 LINC00614P0C842 121 aa15.49■□□□□ 0.07
SMARCD1-203ENST00000547247 RAB5BP61020 215 aa15.49■□□□□ 0.07
SMARCD1-203ENST00000547247 LINC00336Q6ZUF6 198 aa15.49■□□□□ 0.07
SMARCD1-203ENST00000547247 ZNF664Q8N3J9 261 aa15.49■□□□□ 0.07
SMARCD1-203ENST00000547247 AP5S1Q9NUS5 200 aa15.49■□□□□ 0.07
SMARCD1-203ENST00000547247 IGKV2D-24A0A075B6R9 120 aa15.49■□□□□ 0.07
SMARCD1-203ENST00000547247 COX11Q9Y6N1 276 aa15.49■□□□□ 0.07
SMARCD1-203ENST00000547247 FRAS1Q86XX4 4008 aa15.48■□□□□ 0.07
SMARCD1-203ENST00000547247 PSCAO43653 123 aa15.48■□□□□ 0.07
SMARCD1-203ENST00000547247 URB1-AS1Q96HZ7 61 aa15.48■□□□□ 0.07
SMARCD1-203ENST00000547247 C1orf43Q9BWL3 253 aa15.48■□□□□ 0.07
SMARCD1-203ENST00000547247 DNAH17Q9UFH2 4485 aa15.47■□□□□ 0.07
SMARCD1-203ENST00000547247 PYGO1Q9Y3Y4 419 aa15.47■□□□□ 0.07
SMARCD1-203ENST00000547247 TRAV8-4A0A0B4J246 113 aa15.46■□□□□ 0.07
SMARCD1-203ENST00000547247 IGKV3OR2-268A0A0C4DH90 116 aa15.46■□□□□ 0.07
SMARCD1-203ENST00000547247 EPPK1P58107 5090 aaKnown RBP15.46■□□□□ 0.07
SMARCD1-203ENST00000547247 PRSS29PA6NIE9 313 aa15.45■□□□□ 0.06
SMARCD1-203ENST00000547247 Q6ZUT4 128 aa15.45■□□□□ 0.06
SMARCD1-203ENST00000547247 MRPS36P82909 103 aaKnown RBP15.45■□□□□ 0.06
SMARCD1-203ENST00000547247 TOMM6Q96B49 74 aa15.45■□□□□ 0.06
SMARCD1-203ENST00000547247 IGLV10-54A0A075B6I4 117 aa15.44■□□□□ 0.06
SMARCD1-203ENST00000547247 LINC01549A6NIU2 74 aa15.44■□□□□ 0.06
SMARCD1-203ENST00000547247 TNP2Q05952 138 aa15.44■□□□□ 0.06
SMARCD1-203ENST00000547247 RNASE13Q5GAN3 156 aaKnown RBP15.44■□□□□ 0.06
SMARCD1-203ENST00000547247 BAGE3Q86Y29 109 aa15.44■□□□□ 0.06
SMARCD1-203ENST00000547247 OPRPNQ99935 248 aaPredicted RBP15.43■□□□□ 0.06
SMARCD1-203ENST00000547247 FAM104AQ969W3 186 aa15.42■□□□□ 0.06
SMARCD1-203ENST00000547247 CHCHD1Q96BP2 118 aaKnown RBP15.42■□□□□ 0.06
SMARCD1-203ENST00000547247 FAT2Q9NYQ8 4349 aa15.42■□□□□ 0.06
SMARCD1-203ENST00000547247 IGLV4-3A0A075B6K6 122 aa15.41■□□□□ 0.06
SMARCD1-203ENST00000547247 LINC00959A0A1B0GUT2 108 aa15.41■□□□□ 0.06
SMARCD1-203ENST00000547247 IGIPA6NJ69 53 aa15.41■□□□□ 0.06
SMARCD1-203ENST00000547247 NPSP0C0P6 89 aa15.41■□□□□ 0.06
SMARCD1-203ENST00000547247 TMEM141Q96I45 108 aa15.41■□□□□ 0.06
SMARCD1-203ENST00000547247 ERASQ7Z444 233 aa15.4■□□□□ 0.06
SMARCD1-203ENST00000547247 SCGB3A1Q96QR1 104 aa15.4■□□□□ 0.06
SMARCD1-203ENST00000547247 SS18Q15532 418 aa15.39■□□□□ 0.05
SMARCD1-203ENST00000547247 TIMM17AQ99595 171 aa15.39■□□□□ 0.05
SMARCD1-203ENST00000547247 HBDP02042 147 aa15.38■□□□□ 0.05
SMARCD1-203ENST00000547247 KRTAP26-1Q6PEX3 210 aa15.38■□□□□ 0.05
SMARCD1-203ENST00000547247 Q6ZN92 141 aa15.38■□□□□ 0.05
SMARCD1-203ENST00000547247 MAPKAPK5-AS1Q8N8E1 139 aa15.38■□□□□ 0.05
SMARCD1-203ENST00000547247 CHCHD10Q8WYQ3 142 aaPredicted RBP15.38■□□□□ 0.05
SMARCD1-203ENST00000547247 A0A096LNJ9 63 aa15.37■□□□□ 0.05
SMARCD1-203ENST00000547247 CCL25O15444 150 aa15.37■□□□□ 0.05
SMARCD1-203ENST00000547247 PMCHL1Q16048 86 aa15.37■□□□□ 0.05
SMARCD1-203ENST00000547247 TRAV13-1A0A0B4J241 112 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 HIST1H2BKO60814 126 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 HIST1H2BJP06899 126 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 HIST1H2BOP23527 126 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 HIST1H2BBP33778 126 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 HIST1H2BDP58876 126 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 HIST1H2BCP62807 126 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 HIST2H2BEQ16778 126 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 PAPPA-AS1Q5QFB9 102 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 HIST1H2BHQ93079 126 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 HIST1H2BNQ99877 126 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 HIST1H2BMQ99879 126 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 A0A087WTM6 91 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 C1orf196B1AJZ1 125 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 HSBP1O75506 76 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 TEX43Q6ZNM6 134 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 VCX2Q9H322 139 aa15.36■□□□□ 0.05
SMARCD1-203ENST00000547247 LRCOL1A6NCL2 159 aa15.35■□□□□ 0.05
SMARCD1-203ENST00000547247 IFITM10A6NMD0 228 aa15.35■□□□□ 0.05
SMARCD1-203ENST00000547247 SERF1AO75920 110 aa15.35■□□□□ 0.05
SMARCD1-203ENST00000547247 BAALCQ8WXS3 180 aa15.35■□□□□ 0.05
SMARCD1-203ENST00000547247 GAGE12HA6NDE8 117 aa15.34■□□□□ 0.05
SMARCD1-203ENST00000547247 EREGO14944 169 aa15.34■□□□□ 0.05
SMARCD1-203ENST00000547247 XCL1P47992 114 aa15.33■□□□□ 0.05
SMARCD1-203ENST00000547247 AMELXQ99217 191 aa15.33■□□□□ 0.05
SMARCD1-203ENST00000547247 C2orf88Q9BSF0 95 aa15.33■□□□□ 0.05
SMARCD1-203ENST00000547247 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.32■□□□□ 0.04
SMARCD1-203ENST00000547247 LINC00310P59036 64 aa15.32■□□□□ 0.04
SMARCD1-203ENST00000547247 LINC00173Q6ZV60 143 aa15.32■□□□□ 0.04
SMARCD1-203ENST00000547247 LECT2O14960 151 aa15.31■□□□□ 0.04
SMARCD1-203ENST00000547247 PDZD11Q5EBL8 140 aa15.31■□□□□ 0.04
SMARCD1-203ENST00000547247 ZC2HC1BQ5TFG8 222 aa15.31■□□□□ 0.04
SMARCD1-203ENST00000547247 CD164L2Q6UWJ8 174 aa15.31■□□□□ 0.04
SMARCD1-203ENST00000547247 A0A1B0GVY2 172 aa15.3■□□□□ 0.04
SMARCD1-203ENST00000547247 FAM19A2Q8N3H0 131 aa15.3■□□□□ 0.04
SMARCD1-203ENST00000547247 FOXI1Q12951 378 aa15.29■□□□□ 0.04
SMARCD1-203ENST00000547247 WFDC2Q14508 124 aa15.29■□□□□ 0.04
SMARCD1-203ENST00000547247 NUPR1O60356 82 aa15.28■□□□□ 0.04
SMARCD1-203ENST00000547247 ATP5LO75964 103 aa15.28■□□□□ 0.04
SMARCD1-203ENST00000547247 UBE2D1P51668 147 aa15.28■□□□□ 0.04
SMARCD1-203ENST00000547247 HECTD4Q9Y4D8 3996 aa15.27■□□□□ 0.04
SMARCD1-203ENST00000547247 USP17L23D6RBM5 183 aa15.27■□□□□ 0.03
SMARCD1-203ENST00000547247 PKD1P98161 4303 aa15.26■□□□□ 0.03
SMARCD1-203ENST00000547247 Q8N814 137 aa15.26■□□□□ 0.03
SMARCD1-203ENST00000547247 PMVKQ15126 192 aa15.25■□□□□ 0.03
SMARCD1-203ENST00000547247 C14orf177Q52M58 125 aa15.25■□□□□ 0.03
SMARCD1-203ENST00000547247 LINC00242Q5T6M2 205 aa15.25■□□□□ 0.03
SMARCD1-203ENST00000547247 DNAH11Q96DT5 4516 aa15.25■□□□□ 0.03
SMARCD1-203ENST00000547247 CST9LQ9H4G1 147 aa15.24■□□□□ 0.03
SMARCD1-203ENST00000547247 COX7A2LO14548 114 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms