RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 TMEM263Q8WUH6 116 aaKnown RBP10.76□□□□□ -0.69
HOXC11-202ENST00000546378 LEPROTO15243 131 aa10.76□□□□□ -0.69
HOXC11-202ENST00000546378 RBMY1A1P0DJD3 496 aaKnown RBP10.76□□□□□ -0.69
HOXC11-202ENST00000546378 RBMY1CP0DJD4 496 aa10.76□□□□□ -0.69
HOXC11-202ENST00000546378 DSCR9P59020 149 aa10.76□□□□□ -0.69
HOXC11-202ENST00000546378 GAGE6Q13070 117 aa10.76□□□□□ -0.69
HOXC11-202ENST00000546378 RBMY1FQ15415 496 aaKnown RBP10.76□□□□□ -0.69
HOXC11-202ENST00000546378 CLPSL2Q6UWE3 100 aa10.76□□□□□ -0.69
HOXC11-202ENST00000546378 DCANP1Q8TF63 244 aa10.76□□□□□ -0.69
HOXC11-202ENST00000546378 A0A096LPF7 62 aa10.76□□□□□ -0.69
HOXC11-202ENST00000546378 SCGB1A1P11684 91 aa10.76□□□□□ -0.69
HOXC11-202ENST00000546378 NDUFV3P56181 108 aaKnown RBP10.76□□□□□ -0.69
HOXC11-202ENST00000546378 PRIMA1Q86XR5 153 aa10.76□□□□□ -0.69
HOXC11-202ENST00000546378 PFN2P35080 140 aa10.75□□□□□ -0.69
HOXC11-202ENST00000546378 MRPL53Q96EL3 112 aaKnown RBP10.75□□□□□ -0.69
HOXC11-202ENST00000546378 LINC01546A6NGU7 62 aa10.75□□□□□ -0.69
HOXC11-202ENST00000546378 GAGE2AQ6NT46 116 aa10.75□□□□□ -0.69
HOXC11-202ENST00000546378 KMT2BQ9UMN6 2715 aaPredicted RBP10.74□□□□□ -0.69
HOXC11-202ENST00000546378 A0A0J9YX75 114 aa10.74□□□□□ -0.69
HOXC11-202ENST00000546378 HERV-K104P63124 156 aa10.74□□□□□ -0.69
HOXC11-202ENST00000546378 TIMM17AQ99595 171 aa10.74□□□□□ -0.69
HOXC11-202ENST00000546378 GAGE7O76087 117 aa10.73□□□□□ -0.69
HOXC11-202ENST00000546378 GAGE12FP0CL80 117 aa10.73□□□□□ -0.69
HOXC11-202ENST00000546378 GAGE12GP0CL81 117 aa10.73□□□□□ -0.69
HOXC11-202ENST00000546378 GAGE12IP0CL82 117 aa10.73□□□□□ -0.69
HOXC11-202ENST00000546378 USMG5Q96IX5 58 aa10.73□□□□□ -0.69
HOXC11-202ENST00000546378 TRGV11A0A075B6L2 103 aa10.73□□□□□ -0.69
HOXC11-202ENST00000546378 TRBV27A0A0K0K1C4 114 aa10.73□□□□□ -0.69
HOXC11-202ENST00000546378 FAM236AA0A1B0GUQ0 79 aa10.73□□□□□ -0.69
HOXC11-202ENST00000546378 FAM236BA0A1B0GV22 79 aa10.73□□□□□ -0.69
HOXC11-202ENST00000546378 H7C423 109 aa10.73□□□□□ -0.69
HOXC11-202ENST00000546378 KLLNB2CW77 178 aa10.72□□□□□ -0.69
HOXC11-202ENST00000546378 IGHG2P01859 326 aa10.72□□□□□ -0.69
HOXC11-202ENST00000546378 COX6A2Q02221 97 aa10.72□□□□□ -0.69
HOXC11-202ENST00000546378 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.72□□□□□ -0.69
HOXC11-202ENST00000546378 ATP5G1P05496 136 aa10.72□□□□□ -0.69
HOXC11-202ENST00000546378 AMELXQ99217 191 aa10.72□□□□□ -0.69
HOXC11-202ENST00000546378 LENEPQ9Y5L5 61 aa10.72□□□□□ -0.69
HOXC11-202ENST00000546378 RPL35AP18077 110 aaKnown RBP10.71□□□□□ -0.69
HOXC11-202ENST00000546378 TMEM61Q8N0U2 210 aa10.71□□□□□ -0.69
HOXC11-202ENST00000546378 LGALS9O00182 355 aa10.71□□□□□ -0.7
HOXC11-202ENST00000546378 TINCRA0A1B0GVN0 87 aa10.7□□□□□ -0.7
HOXC11-202ENST00000546378 Q8N2B8 174 aa10.7□□□□□ -0.7
HOXC11-202ENST00000546378 WFDC10AQ9H1F0 79 aa10.7□□□□□ -0.7
HOXC11-202ENST00000546378 KLK5Q9Y337 293 aaPredicted RBP10.7□□□□□ -0.7
HOXC11-202ENST00000546378 IGHV4-31P0DP07 118 aa10.7□□□□□ -0.7
HOXC11-202ENST00000546378 LINC00694P0DN24 101 aa10.69□□□□□ -0.7
HOXC11-202ENST00000546378 SLPIP03973 132 aa10.69□□□□□ -0.7
HOXC11-202ENST00000546378 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.69□□□□□ -0.7
HOXC11-202ENST00000546378 ESM1Q9NQ30 184 aa10.69□□□□□ -0.7
HOXC11-202ENST00000546378 IGKV3D-7A0A0C4DH55 119 aa10.68□□□□□ -0.7
HOXC11-202ENST00000546378 NHLRC4P0CG21 123 aaPredicted RBP10.68□□□□□ -0.7
HOXC11-202ENST00000546378 LINC00158P58513 81 aa10.68□□□□□ -0.7
HOXC11-202ENST00000546378 ATP6V0E2Q8NHE4 81 aa10.68□□□□□ -0.7
HOXC11-202ENST00000546378 TRBV10-2A0A0K0K1G8 114 aa10.68□□□□□ -0.7
HOXC11-202ENST00000546378 CIRBPQ14011 172 aaKnown RBP10.68□□□□□ -0.7
HOXC11-202ENST00000546378 ODF3Q96PU9 254 aa10.68□□□□□ -0.7
HOXC11-202ENST00000546378 TRGV2A0A075B6R0 118 aa10.67□□□□□ -0.7
HOXC11-202ENST00000546378 TRBV7-9A0A0J9YWB2 115 aa10.67□□□□□ -0.7
HOXC11-202ENST00000546378 LOC100131303A0A0U1RQF7 123 aa10.67□□□□□ -0.7
HOXC11-202ENST00000546378 IGHV1-58A0A0C4DH39 117 aa10.66□□□□□ -0.7
HOXC11-202ENST00000546378 ATRQ13535 2644 aa10.66□□□□□ -0.7
HOXC11-202ENST00000546378 A6NDX4 124 aa10.66□□□□□ -0.7
HOXC11-202ENST00000546378 C19orf54Q5BKX5 351 aa10.66□□□□□ -0.7
HOXC11-202ENST00000546378 C5orf38Q86SI9 138 aa10.66□□□□□ -0.7
HOXC11-202ENST00000546378 AKAP9Q99996 3911 aa10.66□□□□□ -0.7
HOXC11-202ENST00000546378 SHISA2Q6UWI4 295 aa10.66□□□□□ -0.7
HOXC11-202ENST00000546378 EDA2RQ9HAV5 297 aa10.66□□□□□ -0.7
HOXC11-202ENST00000546378 YAE1D1Q9NRH1 226 aa10.66□□□□□ -0.7
HOXC11-202ENST00000546378 UBE2L6O14933 153 aa10.65□□□□□ -0.7
HOXC11-202ENST00000546378 NSUN5P1Q3KNT7 163 aa10.65□□□□□ -0.7
HOXC11-202ENST00000546378 RHOHQ15669 191 aa10.65□□□□□ -0.7
HOXC11-202ENST00000546378 VSIG2Q96IQ7 327 aa10.65□□□□□ -0.7
HOXC11-202ENST00000546378 Q6ZTI0 123 aa10.64□□□□□ -0.71
HOXC11-202ENST00000546378 TMEM101Q96IK0 257 aa10.64□□□□□ -0.71
HOXC11-202ENST00000546378 NOP10Q9NPE3 64 aaKnown RBP10.64□□□□□ -0.71
HOXC11-202ENST00000546378 A0A096LNT2 108 aa10.64□□□□□ -0.71
HOXC11-202ENST00000546378 K7EQG2 157 aa10.64□□□□□ -0.71
HOXC11-202ENST00000546378 PDZD2O15018 2839 aa10.64□□□□□ -0.71
HOXC11-202ENST00000546378 DEFB130BP0DP73 79 aa10.64□□□□□ -0.71
HOXC11-202ENST00000546378 DEFB130AP0DP74 79 aa10.64□□□□□ -0.71
HOXC11-202ENST00000546378 C9orf85Q96MD7 179 aa10.64□□□□□ -0.71
HOXC11-202ENST00000546378 ZNF469Q96JG9 3925 aaPredicted RBP10.63□□□□□ -0.71
HOXC11-202ENST00000546378 TEP1Q99973 2627 aaKnown RBP10.63□□□□□ -0.71
HOXC11-202ENST00000546378 BAALC-AS2P0C853 105 aa10.63□□□□□ -0.71
HOXC11-202ENST00000546378 DAZ2Q13117 558 aaKnown RBP10.63□□□□□ -0.71
HOXC11-202ENST00000546378 DAZ4Q86SG3 579 aaKnown RBP10.63□□□□□ -0.71
HOXC11-202ENST00000546378 SMR3AQ99954 134 aa10.63□□□□□ -0.71
HOXC11-202ENST00000546378 DAZ3Q9NR90 486 aaKnown RBP10.63□□□□□ -0.71
HOXC11-202ENST00000546378 RBMY1BA6NDE4 496 aaKnown RBP10.62□□□□□ -0.71
HOXC11-202ENST00000546378 RBMY1EA6NEQ0 496 aaKnown RBP10.62□□□□□ -0.71
HOXC11-202ENST00000546378 PAX4O43316 350 aa10.62□□□□□ -0.71
HOXC11-202ENST00000546378 RBMY1DP0C7P1 496 aaKnown RBP10.62□□□□□ -0.71
HOXC11-202ENST00000546378 MIAQ16674 131 aa10.62□□□□□ -0.71
HOXC11-202ENST00000546378 SDIM1Q6ZPB5 146 aa10.62□□□□□ -0.71
HOXC11-202ENST00000546378 HIVEP1P15822 2718 aa10.61□□□□□ -0.71
HOXC11-202ENST00000546378 A0A0B4J2C4 111 aa10.61□□□□□ -0.71
HOXC11-202ENST00000546378 DNAL4O96015 105 aa10.61□□□□□ -0.71
HOXC11-202ENST00000546378 STHQ8IWL8 128 aa10.61□□□□□ -0.71
HOXC11-202ENST00000546378 C14orf132Q9NPU4 83 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms