RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TRBV7-3A0A075B6L6 115 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 LINC01548A6NM66 108 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 FGF6P10767 208 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 ZFP2Q6ZN57 461 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 SLC25A29Q8N8R3 303 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 NBEAQ8NFP9 2946 aa6.53□□□□□ -1.36
CLIP1-218ENST00000545889 hADV29S1A0JD25 119 aa6.52□□□□□ -1.37
CLIP1-218ENST00000545889 ODF3BA8MYP8 253 aa6.52□□□□□ -1.37
CLIP1-218ENST00000545889 FSTL3O95633 263 aa6.52□□□□□ -1.37
CLIP1-218ENST00000545889 SPAG11BQ08648 103 aa6.52□□□□□ -1.37
CLIP1-218ENST00000545889 DEFB114Q30KQ6 69 aa6.52□□□□□ -1.37
CLIP1-218ENST00000545889 PRR20EP86478 221 aa6.52□□□□□ -1.37
CLIP1-218ENST00000545889 PRR20CP86479 221 aa6.52□□□□□ -1.37
CLIP1-218ENST00000545889 PRR20DP86480 221 aa6.52□□□□□ -1.37
CLIP1-218ENST00000545889 PRR20BP86481 221 aa6.52□□□□□ -1.37
CLIP1-218ENST00000545889 PRR20AP86496 221 aa6.52□□□□□ -1.37
CLIP1-218ENST00000545889 FAM236AA0A1B0GUQ0 79 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 FAM236BA0A1B0GV22 79 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 CRYGDP07320 174 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 DEFB1P60022 68 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 URB1-AS1Q96HZ7 61 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 PSMG3-AS1Q96PY0 264 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 SOCS3O14543 225 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 EGR2P11161 476 aaPredicted RBP6.51□□□□□ -1.37
CLIP1-218ENST00000545889 MIFP14174 115 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 C7orf33Q8WU49 177 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 MUC4Q99102 2169 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.51□□□□□ -1.37
CLIP1-218ENST00000545889 IGKV2D-26A0A0A0MRZ7 120 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 A0A0J9YX75 114 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 LYRM9A8MSI8 78 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 HAMPP81172 84 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 FAM231DQ6ZW35 169 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 NFE4Q86UQ8 179 aa6.51□□□□□ -1.37
CLIP1-218ENST00000545889 TEP1Q99973 2627 aaKnown RBP6.5□□□□□ -1.37
CLIP1-218ENST00000545889 TRAV13-2A0A0B4J235 113 aa6.5□□□□□ -1.37
CLIP1-218ENST00000545889 Q9H8V8 135 aa6.5□□□□□ -1.37
CLIP1-218ENST00000545889 NPYP01303 97 aa6.5□□□□□ -1.37
CLIP1-218ENST00000545889 EIF4EBP1Q13541 118 aaPredicted RBP6.5□□□□□ -1.37
CLIP1-218ENST00000545889 DSCR8Q96T75 97 aa6.5□□□□□ -1.37
CLIP1-218ENST00000545889 MRPL35Q9NZE8 188 aaKnown RBP6.5□□□□□ -1.37
CLIP1-218ENST00000545889 HIST2H2BDQ6DRA6 164 aa6.49□□□□□ -1.37
CLIP1-218ENST00000545889 A0A087WZ39 114 aa6.49□□□□□ -1.37
CLIP1-218ENST00000545889 FAM19A5Q7Z5A7 132 aaPredicted RBP6.49□□□□□ -1.37
CLIP1-218ENST00000545889 TEX22C9J3V5 150 aa6.49□□□□□ -1.37
CLIP1-218ENST00000545889 IGLV2-8P01709 118 aa6.49□□□□□ -1.37
CLIP1-218ENST00000545889 NDUFB1O75438 58 aa6.49□□□□□ -1.37
CLIP1-218ENST00000545889 INAFM2P0DMQ5 153 aa6.49□□□□□ -1.37
CLIP1-218ENST00000545889 F8VRH5 84 aa6.48□□□□□ -1.37
CLIP1-218ENST00000545889 LY6LH3BQJ8 138 aa6.48□□□□□ -1.37
CLIP1-218ENST00000545889 J3QQQ9 107 aa6.48□□□□□ -1.37
CLIP1-218ENST00000545889 RS1O15537 224 aa6.48□□□□□ -1.37
CLIP1-218ENST00000545889 P0C879 139 aa6.48□□□□□ -1.37
CLIP1-218ENST00000545889 HIGD2AQ9BW72 106 aa6.48□□□□□ -1.37
CLIP1-218ENST00000545889 UBL5Q9BZL1 73 aa6.48□□□□□ -1.37
CLIP1-218ENST00000545889 FUSP35637 526 aaKnown RBP eCLIP6.48□□□□□ -1.37
CLIP1-218ENST00000545889 CFAP126Q5VTH2 177 aa6.48□□□□□ -1.37
CLIP1-218ENST00000545889 MBD6Q96DN6 1003 aa6.48□□□□□ -1.37
CLIP1-218ENST00000545889 HIGD2BQ4VC39 106 aa6.47□□□□□ -1.37
CLIP1-218ENST00000545889 Q6ZTI0 123 aa6.47□□□□□ -1.37
CLIP1-218ENST00000545889 HIGD1BQ9P298 99 aa6.47□□□□□ -1.37
CLIP1-218ENST00000545889 PRAC2D3DTV9 90 aa6.47□□□□□ -1.37
CLIP1-218ENST00000545889 HRCT1Q6UXD1 115 aa6.47□□□□□ -1.37
CLIP1-218ENST00000545889 TRBV10-1A0A0K0K1A3 114 aa6.47□□□□□ -1.37
CLIP1-218ENST00000545889 LGALS9O00182 355 aa6.47□□□□□ -1.37
CLIP1-218ENST00000545889 TRACP01848 142 aa6.47□□□□□ -1.37
CLIP1-218ENST00000545889 MORN5Q5VZ52 161 aa6.47□□□□□ -1.37
CLIP1-218ENST00000545889 B9D2Q9BPU9 175 aa6.47□□□□□ -1.37
CLIP1-218ENST00000545889 C10orf99Q6UWK7 81 aa6.46□□□□□ -1.37
CLIP1-218ENST00000545889 TCL1BO95988 128 aa6.46□□□□□ -1.38
CLIP1-218ENST00000545889 P0DMU3 169 aa6.46□□□□□ -1.38
CLIP1-218ENST00000545889 FAM231AP0DMU4 169 aa6.46□□□□□ -1.38
CLIP1-218ENST00000545889 FAM231CP0DMU5 169 aa6.46□□□□□ -1.38
CLIP1-218ENST00000545889 Q6ZS46 218 aa6.46□□□□□ -1.38
CLIP1-218ENST00000545889 AGRNO00468 2067 aa6.46□□□□□ -1.38
CLIP1-218ENST00000545889 ITPR1Q14643 2758 aa6.46□□□□□ -1.38
CLIP1-218ENST00000545889 A0A1B0GXF2 115 aa6.46□□□□□ -1.38
CLIP1-218ENST00000545889 UNC79Q9P2D8 2635 aa6.46□□□□□ -1.38
CLIP1-218ENST00000545889 LINC00322Q6ZN03 302 aaPredicted RBP6.45□□□□□ -1.38
CLIP1-218ENST00000545889 RPL39LQ96EH5 51 aaKnown RBP6.45□□□□□ -1.38
CLIP1-218ENST00000545889 TEX49A0A1B0GTD5 131 aa6.45□□□□□ -1.38
CLIP1-218ENST00000545889 K7EQG2 157 aa6.45□□□□□ -1.38
CLIP1-218ENST00000545889 CXCL5P42830 114 aa6.45□□□□□ -1.38
CLIP1-218ENST00000545889 C9orf47Q6ZRZ4 202 aa6.45□□□□□ -1.38
CLIP1-218ENST00000545889 MAPKAPK5-AS1Q8N8E1 139 aa6.45□□□□□ -1.38
CLIP1-218ENST00000545889 MDFICQ9P1T7 246 aa6.45□□□□□ -1.38
CLIP1-218ENST00000545889 CCDC140Q96MF4 163 aa6.45□□□□□ -1.38
CLIP1-218ENST00000545889 LRBAP50851 2863 aa6.44□□□□□ -1.38
CLIP1-218ENST00000545889 A0A0J9YXV3 536 aa6.44□□□□□ -1.38
CLIP1-218ENST00000545889 WI2-2373I1.2A0A1W2PRP0 233 aa6.44□□□□□ -1.38
CLIP1-218ENST00000545889 GATA1P15976 413 aaPredicted RBP6.44□□□□□ -1.38
CLIP1-218ENST00000545889 RELNP78509 3460 aa6.44□□□□□ -1.38
CLIP1-218ENST00000545889 FSHBP01225 129 aa6.44□□□□□ -1.38
CLIP1-218ENST00000545889 IGLC6P0CF74 106 aa6.44□□□□□ -1.38
CLIP1-218ENST00000545889 KIR2DL5BQ8NHK3 375 aa6.44□□□□□ -1.38
CLIP1-218ENST00000545889 ZNF702PQ9H963 129 aa6.44□□□□□ -1.38
CLIP1-218ENST00000545889 A0A096LNI7 61 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 TRAV12-1A0A0B4J245 112 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 NUPR2A6NF83 97 aa6.43□□□□□ -1.38
CLIP1-218ENST00000545889 NDUFA7O95182 113 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 977.9 ms