RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SMIM8Q96KF7 97 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 C11orf1Q9H5F2 150 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 TMEM262E9PQX1 116 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 H3BP45 60 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 COX7A2P2O60397 106 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 MT-ND6P03923 174 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 TAS2R30P59541 319 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 PKIAP61925 76 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 SSBP1Q04837 148 aaKnown RBP1.31□□□□□ -2.2
SNHG1-224ENST00000545688 IQCJQ1A5X6 159 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 KRTAP19-6Q3LI70 58 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 MIC13Q5XKP0 118 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 PHF5AQ7RTV0 110 aaKnown RBP1.31□□□□□ -2.2
SNHG1-224ENST00000545688 SNX29P2Q8IUI4 249 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 C12orf45Q8N5I9 185 aaPredicted RBP1.31□□□□□ -2.2
SNHG1-224ENST00000545688 MITD1Q8WV92 249 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 ASB13Q8WXK3 278 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 DIRAS2Q96HU8 199 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 PFDN5Q99471 154 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 RETNLBQ9BQ08 111 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 MED28Q9H204 178 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 IL36BQ9NZH7 164 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 COMMD3Q9UBI1 195 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 RABL2BQ9UNT1 228 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 C14orf166Q9Y224 244 aaKnown RBP1.31□□□□□ -2.2
SNHG1-224ENST00000545688 KMT2DO14686 5537 aa1.31□□□□□ -2.2
SNHG1-224ENST00000545688 PIGBOS1A0A0B4J2F0 54 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 TRBV6-1A0A0K0K1D8 114 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 LOC100506127A0A0U1RQW1 187 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 SMCO3A2RU48 225 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 PTTG1O95997 202 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 METTL15P1P0C7V9 234 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 AQP4P55087 323 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 GABARAPL2P60520 117 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 RRAS2P62070 204 aaPredicted RBP1.3□□□□□ -2.2
SNHG1-224ENST00000545688 KRTAP20-1Q3LI63 56 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 SCGB2B2Q4G0G5 96 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 TMEM128Q5BJH2 165 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 C9orf116Q5BN46 136 aaPredicted RBP1.3□□□□□ -2.2
SNHG1-224ENST00000545688 GCSAMLQ5JQS6 135 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 AMMECR1LQ6DCA0 310 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 CLPSL2Q6UWE3 100 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 FP248Q71RG6 208 aaPredicted RBP1.3□□□□□ -2.2
SNHG1-224ENST00000545688 OR5C1Q8NGR4 320 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 DYNC2LI1Q8TCX1 351 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 TSKUQ8WUA8 353 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 SFRP2Q96HF1 295 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 ATP5SQ99766 215 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 PRRT1Q99946 306 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 TMEM243Q9BU79 118 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 SLIRPQ9GZT3 109 aaKnown RBP1.3□□□□□ -2.2
SNHG1-224ENST00000545688 PSENENQ9NZ42 101 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 CCDC59Q9P031 241 aaKnown RBP1.3□□□□□ -2.2
SNHG1-224ENST00000545688 NAGKQ9UJ70 344 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 PAIP2BQ9ULR5 123 aaKnown RBP1.3□□□□□ -2.2
SNHG1-224ENST00000545688 TIMM9Q9Y5J7 89 aa1.3□□□□□ -2.2
SNHG1-224ENST00000545688 SMIM31A0A1B0GVY4 71 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 ANKRD20A5PA0PJZ0 165 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 DISC1C4P0D8 188 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 F6UZH7 168 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 HPGDSO60760 199 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 SFT2D2O95562 160 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 AKAIN1P0CW23 69 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 FGF6P10767 208 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 UBE2D1P51668 147 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 RAB2AP61019 212 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 RANP62826 216 aaKnown RBP1.29□□□□□ -2.2
SNHG1-224ENST00000545688 TMEM97Q5BJF2 176 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 MIR17HGQ75NE6 70 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 NUP35Q8NFH5 326 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 SMIM4Q8WVI0 70 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 SCGB3A2Q96PL1 93 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 VCX2Q9H322 139 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 TREM1Q9NP99 234 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 OR5AC2Q9NZP5 309 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 RSL24D1Q9UHA3 163 aaKnown RBP1.29□□□□□ -2.2
SNHG1-224ENST00000545688 PKIGQ9Y2B9 76 aa1.29□□□□□ -2.2
SNHG1-224ENST00000545688 LOC107984640A0A0U1RRK4 108 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 SSSCA1O60232 199 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 GCGP01275 180 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 ARMS2P0C7Q2 107 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 FGF7P21781 194 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 CSN1S1P47710 185 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 CRIP1P50238 77 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 RAB5CP51148 216 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 S100A10P60903 97 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 RAB4BP61018 213 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 MRPS10P82664 201 aaKnown RBP1.28□□□□□ -2.2
SNHG1-224ENST00000545688 PPP1R1AQ13522 171 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 LGALSLQ3ZCW2 172 aaPredicted RBP1.28□□□□□ -2.2
SNHG1-224ENST00000545688 LINC00469Q8N7U9 141 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 LINC00526Q96FQ7 95 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 CARD19Q96LW7 228 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 AQP10Q96PS8 301 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 BCL7BQ9BQE9 202 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 ZNF471Q9BX82 626 aaPredicted RBP1.28□□□□□ -2.2
SNHG1-224ENST00000545688 OTORQ9NRC9 128 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 LYRM2Q9NU23 88 aaPredicted RBP1.28□□□□□ -2.2
SNHG1-224ENST00000545688 BLOC1S6Q9UL45 172 aa1.28□□□□□ -2.2
SNHG1-224ENST00000545688 TRBV25-1A0A075B6N4 114 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms