RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 CHCHD7Q9BUK0 85 aa6.57□□□□□ -1.36
YBX3-215ENST00000544504 PYGO1Q9Y3Y4 419 aa6.57□□□□□ -1.36
YBX3-215ENST00000544504 CSDC2Q9Y534 153 aaKnown RBP6.57□□□□□ -1.36
YBX3-215ENST00000544504 A0A096LNJ9 63 aa6.56□□□□□ -1.36
YBX3-215ENST00000544504 FABP4P15090 132 aa6.56□□□□□ -1.36
YBX3-215ENST00000544504 AKR1D1P51857 326 aa6.56□□□□□ -1.36
YBX3-215ENST00000544504 PMCHL1Q16048 86 aa6.56□□□□□ -1.36
YBX3-215ENST00000544504 Q6ZN92 141 aa6.56□□□□□ -1.36
YBX3-215ENST00000544504 HIST1H2BLQ99880 126 aa6.56□□□□□ -1.36
YBX3-215ENST00000544504 MAP1LC3CQ9BXW4 147 aa6.56□□□□□ -1.36
YBX3-215ENST00000544504 DNAH6Q9C0G6 4158 aa6.56□□□□□ -1.36
YBX3-215ENST00000544504 DNAH17Q9UFH2 4485 aa6.56□□□□□ -1.36
YBX3-215ENST00000544504 A0A087WX48 190 aa6.55□□□□□ -1.36
YBX3-215ENST00000544504 A0A1B0GUV1 79 aa6.55□□□□□ -1.36
YBX3-215ENST00000544504 FGF6P10767 208 aa6.55□□□□□ -1.36
YBX3-215ENST00000544504 MRPS36P82909 103 aaKnown RBP6.55□□□□□ -1.36
YBX3-215ENST00000544504 LGALS9CQ6DKI2 356 aa6.55□□□□□ -1.36
YBX3-215ENST00000544504 OR5A1Q8NGJ0 315 aa6.55□□□□□ -1.36
YBX3-215ENST00000544504 IFI27L1Q96BM0 104 aa6.55□□□□□ -1.36
YBX3-215ENST00000544504 PKD1P98161 4303 aa6.55□□□□□ -1.36
YBX3-215ENST00000544504 HSPG2P98160 4391 aa6.54□□□□□ -1.36
YBX3-215ENST00000544504 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.54□□□□□ -1.36
YBX3-215ENST00000544504 IGKV2-29A2NJV5 120 aaPredicted RBP6.54□□□□□ -1.36
YBX3-215ENST00000544504 IGIPA6NJ69 53 aa6.54□□□□□ -1.36
YBX3-215ENST00000544504 TMEM262E9PQX1 116 aa6.54□□□□□ -1.36
YBX3-215ENST00000544504 RPL39P62891 51 aaKnown RBP6.54□□□□□ -1.36
YBX3-215ENST00000544504 ESRGQ1W209 222 aa6.54□□□□□ -1.36
YBX3-215ENST00000544504 DEFB104AQ8WTQ1 72 aa6.54□□□□□ -1.36
YBX3-215ENST00000544504 APLNQ9ULZ1 77 aa6.54□□□□□ -1.36
YBX3-215ENST00000544504 UBE2D4Q9Y2X8 147 aa6.54□□□□□ -1.36
YBX3-215ENST00000544504 MRPS16Q9Y3D3 137 aaKnown RBP6.54□□□□□ -1.36
YBX3-215ENST00000544504 C20orf202A1L168 122 aa6.53□□□□□ -1.36
YBX3-215ENST00000544504 PRSS1P07477 247 aa6.53□□□□□ -1.36
YBX3-215ENST00000544504 GAGE6Q13070 117 aa6.53□□□□□ -1.36
YBX3-215ENST00000544504 PET117Q6UWS5 81 aa6.53□□□□□ -1.36
YBX3-215ENST00000544504 C2orf88Q9BSF0 95 aa6.53□□□□□ -1.36
YBX3-215ENST00000544504 UPK3BQ9BT76 320 aa6.53□□□□□ -1.36
YBX3-215ENST00000544504 VCX2Q9H322 139 aa6.53□□□□□ -1.36
YBX3-215ENST00000544504 K7EP13 123 aa6.52□□□□□ -1.37
YBX3-215ENST00000544504 KRTDAPP60985 99 aa6.52□□□□□ -1.37
YBX3-215ENST00000544504 PMVKQ15126 192 aa6.52□□□□□ -1.37
YBX3-215ENST00000544504 TEX43Q6ZNM6 134 aa6.52□□□□□ -1.37
YBX3-215ENST00000544504 SPATA12Q7Z6I5 190 aa6.52□□□□□ -1.37
YBX3-215ENST00000544504 UBE2DNLQ8IWF7 75 aa6.52□□□□□ -1.37
YBX3-215ENST00000544504 OR10D4PQ8NGN7 298 aa6.52□□□□□ -1.37
YBX3-215ENST00000544504 IGLV4-3A0A075B6K6 122 aa6.51□□□□□ -1.37
YBX3-215ENST00000544504 TRAV9-2A0A087WT02 112 aa6.51□□□□□ -1.37
YBX3-215ENST00000544504 TRAV12-1A0A0B4J245 112 aa6.51□□□□□ -1.37
YBX3-215ENST00000544504 IFITM10A6NMD0 228 aa6.51□□□□□ -1.37
YBX3-215ENST00000544504 SYS1-DBNDD2H3BUS1 97 aa6.51□□□□□ -1.37
YBX3-215ENST00000544504 CCL25O15444 150 aa6.51□□□□□ -1.37
YBX3-215ENST00000544504 RBX1P62877 108 aa6.51□□□□□ -1.37
YBX3-215ENST00000544504 ZNF664Q8N3J9 261 aa6.51□□□□□ -1.37
YBX3-215ENST00000544504 SIVA1O15304 175 aa6.5□□□□□ -1.37
YBX3-215ENST00000544504 C3orf79P0CE67 100 aa6.5□□□□□ -1.37
YBX3-215ENST00000544504 DNAH10OSP0CZ25 163 aa6.5□□□□□ -1.37
YBX3-215ENST00000544504 SEC11AP67812 179 aa6.5□□□□□ -1.37
YBX3-215ENST00000544504 LINC01556Q5JQF7 62 aa6.5□□□□□ -1.37
YBX3-215ENST00000544504 LINC00336Q6ZUF6 198 aa6.5□□□□□ -1.37
YBX3-215ENST00000544504 C10orf126Q8N4M7 172 aa6.5□□□□□ -1.37
YBX3-215ENST00000544504 BAALCQ8WXS3 180 aa6.5□□□□□ -1.37
YBX3-215ENST00000544504 CDC42SE2Q9NRR3 84 aa6.5□□□□□ -1.37
YBX3-215ENST00000544504 LINC00588Q9Y4M8 146 aa6.5□□□□□ -1.37
YBX3-215ENST00000544504 ANGP03950 147 aaKnown RBP6.49□□□□□ -1.37
YBX3-215ENST00000544504 MPV17L2Q567V2 206 aa6.49□□□□□ -1.37
YBX3-215ENST00000544504 Q6ZUT4 128 aa6.49□□□□□ -1.37
YBX3-215ENST00000544504 LINC00173Q6ZV60 143 aa6.49□□□□□ -1.37
YBX3-215ENST00000544504 WFDC10BQ8IUB3 73 aa6.49□□□□□ -1.37
YBX3-215ENST00000544504 AMELXQ99217 191 aa6.49□□□□□ -1.37
YBX3-215ENST00000544504 KRTAP4-5Q9BYR2 181 aa6.49□□□□□ -1.37
YBX3-215ENST00000544504 CST9LQ9H4G1 147 aa6.49□□□□□ -1.37
YBX3-215ENST00000544504 PRSS29PA6NIE9 313 aa6.48□□□□□ -1.37
YBX3-215ENST00000544504 F8VRH5 84 aa6.48□□□□□ -1.37
YBX3-215ENST00000544504 H0Y8G0 127 aa6.48□□□□□ -1.37
YBX3-215ENST00000544504 CRPP02741 224 aa6.48□□□□□ -1.37
YBX3-215ENST00000544504 PLNP26678 52 aa6.48□□□□□ -1.37
YBX3-215ENST00000544504 LINC01545Q5VT33 79 aa6.48□□□□□ -1.37
YBX3-215ENST00000544504 CHTOPQ9Y3Y2 248 aaKnown RBP6.48□□□□□ -1.37
YBX3-215ENST00000544504 IGLV4-60A0A075B6I1 120 aa6.47□□□□□ -1.37
YBX3-215ENST00000544504 LOC105371267A0A1B0GV96 52 aa6.47□□□□□ -1.37
YBX3-215ENST00000544504 A0A1B0GVY2 172 aa6.47□□□□□ -1.37
YBX3-215ENST00000544504 SCGB1D1O95968 90 aa6.47□□□□□ -1.37
YBX3-215ENST00000544504 ODF1Q14990 250 aa6.47□□□□□ -1.37
YBX3-215ENST00000544504 JOSD1Q15040 202 aaPredicted RBP6.47□□□□□ -1.37
YBX3-215ENST00000544504 SS18Q15532 418 aa6.47□□□□□ -1.37
YBX3-215ENST00000544504 TTC32Q5I0X7 151 aa6.47□□□□□ -1.37
YBX3-215ENST00000544504 Q8N976 141 aa6.47□□□□□ -1.37
YBX3-215ENST00000544504 Q9H8V8 135 aa6.47□□□□□ -1.37
YBX3-215ENST00000544504 TRAV8-4A0A0B4J246 113 aa6.46□□□□□ -1.38
YBX3-215ENST00000544504 DPM2O94777 84 aa6.46□□□□□ -1.38
YBX3-215ENST00000544504 IGHV3-30P01768 117 aa6.46□□□□□ -1.38
YBX3-215ENST00000544504 IGHV3-33P01772 117 aa6.46□□□□□ -1.38
YBX3-215ENST00000544504 IGHV3-30-3P0DP02 117 aa6.46□□□□□ -1.38
YBX3-215ENST00000544504 IGHV3-30-5P0DP03 117 aa6.46□□□□□ -1.38
YBX3-215ENST00000544504 REG3AQ06141 175 aa6.46□□□□□ -1.38
YBX3-215ENST00000544504 MIAQ16674 131 aa6.46□□□□□ -1.38
YBX3-215ENST00000544504 FAM19A3Q7Z5A8 133 aa6.46□□□□□ -1.38
YBX3-215ENST00000544504 OPRPNQ99935 248 aaPredicted RBP6.46□□□□□ -1.38
YBX3-215ENST00000544504 GEMIN7Q9H840 131 aaKnown RBP6.46□□□□□ -1.38
YBX3-215ENST00000544504 PRR34Q9NV39 138 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms