RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 E9PLD3 99 aa6.65□□□□□ -1.34
GNE-206ENST00000543356 DEFB135Q30KP9 77 aa6.65□□□□□ -1.34
GNE-206ENST00000543356 GAGE13Q4V321 117 aa6.65□□□□□ -1.34
GNE-206ENST00000543356 LGALS9CQ6DKI2 356 aa6.65□□□□□ -1.34
GNE-206ENST00000543356 NEXN-AS1Q8NBZ9 246 aa6.65□□□□□ -1.34
GNE-206ENST00000543356 TRRAPQ9Y4A5 3859 aa6.65□□□□□ -1.34
GNE-206ENST00000543356 TSHBP01222 138 aa6.65□□□□□ -1.34
GNE-206ENST00000543356 P0DMU3 169 aa6.65□□□□□ -1.34
GNE-206ENST00000543356 FAM231AP0DMU4 169 aa6.65□□□□□ -1.34
GNE-206ENST00000543356 FAM231CP0DMU5 169 aa6.65□□□□□ -1.34
GNE-206ENST00000543356 PCP2Q8IVA1 136 aa6.65□□□□□ -1.34
GNE-206ENST00000543356 ANK2Q01484 3957 aa6.65□□□□□ -1.35
GNE-206ENST00000543356 TRGV2A0A075B6R0 118 aa6.64□□□□□ -1.35
GNE-206ENST00000543356 TRBV10-1A0A0K0K1A3 114 aa6.64□□□□□ -1.35
GNE-206ENST00000543356 SMCPP49901 116 aaPredicted RBP6.64□□□□□ -1.35
GNE-206ENST00000543356 NDUFV3P56181 108 aaKnown RBP6.64□□□□□ -1.35
GNE-206ENST00000543356 C2orf66Q6UXQ4 117 aa6.64□□□□□ -1.35
GNE-206ENST00000543356 K7EQD1 137 aa6.64□□□□□ -1.35
GNE-206ENST00000543356 GCSHP23434 173 aa6.64□□□□□ -1.35
GNE-206ENST00000543356 LYRM9A8MSI8 78 aa6.63□□□□□ -1.35
GNE-206ENST00000543356 IGLL5B9A064 214 aa6.63□□□□□ -1.35
GNE-206ENST00000543356 MIFP14174 115 aa6.63□□□□□ -1.35
GNE-206ENST00000543356 EMP1P54849 157 aa6.63□□□□□ -1.35
GNE-206ENST00000543356 CARD19Q96LW7 228 aa6.63□□□□□ -1.35
GNE-206ENST00000543356 SCGB3A1Q96QR1 104 aa6.63□□□□□ -1.35
GNE-206ENST00000543356 DNAH3Q8TD57 4116 aa6.63□□□□□ -1.35
GNE-206ENST00000543356 TRBV6-4A0A1B0GX49 114 aa6.63□□□□□ -1.35
GNE-206ENST00000543356 NHP2Q9NX24 153 aaKnown RBP6.63□□□□□ -1.35
GNE-206ENST00000543356 TP53TG1Q9Y2A0 90 aa6.63□□□□□ -1.35
GNE-206ENST00000543356 TRAV12-1A0A0B4J245 112 aa6.62□□□□□ -1.35
GNE-206ENST00000543356 IGHV4-28A0A0C4DH34 117 aa6.62□□□□□ -1.35
GNE-206ENST00000543356 SLC25A29Q8N8R3 303 aa6.62□□□□□ -1.35
GNE-206ENST00000543356 Q8NAQ8 132 aa6.62□□□□□ -1.35
GNE-206ENST00000543356 ZMAT4Q9H898 229 aa6.62□□□□□ -1.35
GNE-206ENST00000543356 Q9UF83 564 aa6.62□□□□□ -1.35
GNE-206ENST00000543356 TRBV7-3A0A075B6L6 115 aa6.62□□□□□ -1.35
GNE-206ENST00000543356 PRSS1P07477 247 aa6.62□□□□□ -1.35
GNE-206ENST00000543356 C20orf203Q8NBC4 194 aa6.62□□□□□ -1.35
GNE-206ENST00000543356 TMEM141Q96I45 108 aa6.62□□□□□ -1.35
GNE-206ENST00000543356 TIMM17AQ99595 171 aa6.62□□□□□ -1.35
GNE-206ENST00000543356 LOC107984640A0A0U1RRK4 108 aa6.61□□□□□ -1.35
GNE-206ENST00000543356 IGIPA6NJ69 53 aa6.61□□□□□ -1.35
GNE-206ENST00000543356 TIRAPP58753 221 aa6.61□□□□□ -1.35
GNE-206ENST00000543356 SEC61GP60059 68 aa6.61□□□□□ -1.35
GNE-206ENST00000543356 RPL36AP83881 106 aaKnown RBP6.61□□□□□ -1.35
GNE-206ENST00000543356 FHL2Q14192 279 aa6.61□□□□□ -1.35
GNE-206ENST00000543356 RPL36ALQ969Q0 106 aaKnown RBP6.61□□□□□ -1.35
GNE-206ENST00000543356 TRGV4A0A0C4DH28 118 aa6.61□□□□□ -1.35
GNE-206ENST00000543356 FAM222AQ5U5X8 452 aa6.61□□□□□ -1.35
GNE-206ENST00000543356 TTTY13Q9BZ97 58 aa6.61□□□□□ -1.35
GNE-206ENST00000543356 DKK2Q9UBU2 259 aa6.61□□□□□ -1.35
GNE-206ENST00000543356 DEFB130BP0DP73 79 aa6.6□□□□□ -1.35
GNE-206ENST00000543356 DEFB130AP0DP74 79 aa6.6□□□□□ -1.35
GNE-206ENST00000543356 UBE2D3P61077 147 aa6.6□□□□□ -1.35
GNE-206ENST00000543356 UBE2D2P62837 147 aa6.6□□□□□ -1.35
GNE-206ENST00000543356 RPL39P62891 51 aaKnown RBP6.6□□□□□ -1.35
GNE-206ENST00000543356 MEIG1Q5JSS6 88 aa6.6□□□□□ -1.35
GNE-206ENST00000543356 DAZ4Q86SG3 579 aaKnown RBP6.6□□□□□ -1.35
GNE-206ENST00000543356 ATP6V0E2Q8NHE4 81 aa6.6□□□□□ -1.35
GNE-206ENST00000543356 ZNRF2Q8NHG8 242 aa6.6□□□□□ -1.35
GNE-206ENST00000543356 BAALCQ8WXS3 180 aa6.6□□□□□ -1.35
GNE-206ENST00000543356 DAZ3Q9NR90 486 aaKnown RBP6.6□□□□□ -1.35
GNE-206ENST00000543356 STAB1Q9NY15 2570 aa6.6□□□□□ -1.35
GNE-206ENST00000543356 NMUP48645 174 aa6.6□□□□□ -1.35
GNE-206ENST00000543356 DEFB104AQ8WTQ1 72 aa6.6□□□□□ -1.35
GNE-206ENST00000543356 MDFIQ99750 246 aa6.59□□□□□ -1.35
GNE-206ENST00000543356 CHCHD7Q9BUK0 85 aa6.59□□□□□ -1.35
GNE-206ENST00000543356 DPM2O94777 84 aa6.59□□□□□ -1.36
GNE-206ENST00000543356 LINC00694P0DN24 101 aa6.59□□□□□ -1.36
GNE-206ENST00000543356 PRADC1Q9BSG0 188 aa6.59□□□□□ -1.36
GNE-206ENST00000543356 PYGO1Q9Y3Y4 419 aa6.59□□□□□ -1.36
GNE-206ENST00000543356 IGHV3-38A0A0C4DH36 116 aa6.58□□□□□ -1.36
GNE-206ENST00000543356 F8VRH5 84 aa6.58□□□□□ -1.36
GNE-206ENST00000543356 ZNF561-AS1K7EIQ3 104 aa6.58□□□□□ -1.36
GNE-206ENST00000543356 IGKCP01834 107 aa6.58□□□□□ -1.36
GNE-206ENST00000543356 PLNP26678 52 aa6.58□□□□□ -1.36
GNE-206ENST00000543356 KPRPQ5T749 579 aaPredicted RBP6.58□□□□□ -1.36
GNE-206ENST00000543356 NOTCH3Q9UM47 2321 aa6.58□□□□□ -1.36
GNE-206ENST00000543356 CHAC1Q9BUX1 264 aa6.58□□□□□ -1.36
GNE-206ENST00000543356 MRPL35Q9NZE8 188 aaKnown RBP6.58□□□□□ -1.36
GNE-206ENST00000543356 DEFB4AO15263 64 aa6.57□□□□□ -1.36
GNE-206ENST00000543356 SPART-AS1P0CW21 52 aa6.57□□□□□ -1.36
GNE-206ENST00000543356 IFITM1P13164 125 aa6.57□□□□□ -1.36
GNE-206ENST00000543356 GAGE2BQ13066 116 aa6.57□□□□□ -1.36
GNE-206ENST00000543356 PMVKQ15126 192 aa6.57□□□□□ -1.36
GNE-206ENST00000543356 GAGE2EQ4V326 116 aa6.57□□□□□ -1.36
GNE-206ENST00000543356 SPANXA1Q9NS26 97 aa6.57□□□□□ -1.36
GNE-206ENST00000543356 GAGE2DQ9UEU5 116 aa6.57□□□□□ -1.36
GNE-206ENST00000543356 HHLA3Q9XRX5 114 aa6.57□□□□□ -1.36
GNE-206ENST00000543356 IGKV2D-26A0A0A0MRZ7 120 aa6.57□□□□□ -1.36
GNE-206ENST00000543356 DAD1P61803 113 aa6.57□□□□□ -1.36
GNE-206ENST00000543356 MRPL23Q16540 153 aaKnown RBP6.57□□□□□ -1.36
GNE-206ENST00000543356 CELA1Q9UNI1 258 aa6.57□□□□□ -1.36
GNE-206ENST00000543356 LOC100131303A0A0U1RQF7 123 aa6.56□□□□□ -1.36
GNE-206ENST00000543356 C12orf74Q32Q52 190 aa6.56□□□□□ -1.36
GNE-206ENST00000543356 PAPPA-AS1Q5QFB9 102 aa6.56□□□□□ -1.36
GNE-206ENST00000543356 PRO0255Q9UI72 69 aa6.56□□□□□ -1.36
GNE-206ENST00000543356 IGLV4-3A0A075B6K6 122 aa6.56□□□□□ -1.36
GNE-206ENST00000543356 TTC32Q5I0X7 151 aa6.56□□□□□ -1.36
GNE-206ENST00000543356 CEND1Q8N111 149 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 226.9 ms