RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	XG	P55808	180 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	NANOS2	P60321	138 aa	Known RBP	4.57	□□□□□ -1.68
CIT-213	ENST00000543324	UBE2D3	P61077	147 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	LYZ	P61626	148 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	UBE2D2	P62837	147 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	GAGE5	Q13069	117 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	GAGE6	Q13070	117 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	XP32	Q5T750	250 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324		Q6Q795	121 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324		Q6ZSN1	163 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	TEN1	Q86WV5	123 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	STH	Q8IWL8	128 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	RNF125	Q96EQ8	232 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	C20orf78	Q9BR46	151 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	APLN	Q9ULZ1	77 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	TRBV20-1	A0A075B6N2	111 aa		4.56	□□□□□ -1.68
CIT-213	ENST00000543324		F8VRH5	84 aa		4.56	□□□□□ -1.68
CIT-213	ENST00000543324	TNFRSF6B	O95407	300 aa		4.56	□□□□□ -1.68
CIT-213	ENST00000543324	PRSS1	P07477	247 aa		4.56	□□□□□ -1.68
CIT-213	ENST00000543324		Q6ZR54	194 aa		4.56	□□□□□ -1.68
CIT-213	ENST00000543324	C11orf45	Q8TAV5	145 aa		4.56	□□□□□ -1.68
CIT-213	ENST00000543324	C8orf49	Q96NF6	230 aa		4.56	□□□□□ -1.68
CIT-213	ENST00000543324	HIST1H4G	Q99525	98 aa		4.56	□□□□□ -1.68
CIT-213	ENST00000543324	AAMDC	Q9H7C9	122 aa		4.56	□□□□□ -1.68
CIT-213	ENST00000543324	CELA1	Q9UNI1	258 aa		4.56	□□□□□ -1.68
CIT-213	ENST00000543324	MYMX	A0A1B0GTQ4	84 aa		4.55	□□□□□ -1.68
CIT-213	ENST00000543324	SMKR1	H3BMG3	65 aa		4.55	□□□□□ -1.68
CIT-213	ENST00000543324		H3BTX0	84 aa		4.55	□□□□□ -1.68
CIT-213	ENST00000543324		H7C1H1	209 aa		4.55	□□□□□ -1.68
CIT-213	ENST00000543324	DEFB4A	O15263	64 aa		4.55	□□□□□ -1.68
CIT-213	ENST00000543324	MT-ATP8	P03928	68 aa		4.55	□□□□□ -1.68
CIT-213	ENST00000543324	RPL11	P62913	178 aa	Known RBP	4.55	□□□□□ -1.68
CIT-213	ENST00000543324	LAGE3	Q14657	143 aa		4.55	□□□□□ -1.68
CIT-213	ENST00000543324	CARD19	Q96LW7	228 aa		4.55	□□□□□ -1.68
CIT-213	ENST00000543324	MRPL35	Q9NZE8	188 aa	Known RBP	4.55	□□□□□ -1.68
CIT-213	ENST00000543324	IGHV4-4	A0A075B6R2	117 aa		4.54	□□□□□ -1.68
CIT-213	ENST00000543324	RBAKDN	A6NC62	111 aa		4.54	□□□□□ -1.68
CIT-213	ENST00000543324	LINC01549	A6NIU2	74 aa		4.54	□□□□□ -1.68
CIT-213	ENST00000543324	FXYD7	P58549	80 aa		4.54	□□□□□ -1.68
CIT-213	ENST00000543324	SNRPD3	P62318	126 aa	Known RBP	4.54	□□□□□ -1.68
CIT-213	ENST00000543324	AMTN	Q6UX39	209 aa		4.54	□□□□□ -1.68
CIT-213	ENST00000543324		Q6ZTC4	211 aa		4.54	□□□□□ -1.68
CIT-213	ENST00000543324	NFE4	Q86UQ8	179 aa		4.54	□□□□□ -1.68
CIT-213	ENST00000543324	NRAC	Q8N912	160 aa		4.54	□□□□□ -1.68
CIT-213	ENST00000543324	TTTY13	Q9BZ97	58 aa		4.54	□□□□□ -1.68
CIT-213	ENST00000543324		A0A0J9YX75	114 aa		4.53	□□□□□ -1.68
CIT-213	ENST00000543324	FABP5P3	A8MUU1	101 aa		4.53	□□□□□ -1.68
CIT-213	ENST00000543324	RHOD	O00212	210 aa		4.53	□□□□□ -1.68
CIT-213	ENST00000543324	RPL7	P18124	248 aa	Known RBP	4.53	□□□□□ -1.68
CIT-213	ENST00000543324	HLA-DMB	P28068	263 aa		4.53	□□□□□ -1.68
CIT-213	ENST00000543324	DEFB1	P60022	68 aa		4.53	□□□□□ -1.68
CIT-213	ENST00000543324	MRPL23	Q16540	153 aa	Known RBP	4.53	□□□□□ -1.68
CIT-213	ENST00000543324	ORMDL2	Q53FV1	153 aa		4.53	□□□□□ -1.68
CIT-213	ENST00000543324	C20orf173	Q96LM9	149 aa		4.53	□□□□□ -1.68
CIT-213	ENST00000543324	ANAPC13	Q9BS18	74 aa		4.53	□□□□□ -1.68
CIT-213	ENST00000543324	TPPP3	Q9BW30	176 aa		4.53	□□□□□ -1.68
CIT-213	ENST00000543324	TMSB15B	A0A087X1C1	80 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	TRAV8-2	A0A0B4J237	113 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	TRAV10	A0A0B4J240	114 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	SMIM9	A6NGZ8	99 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324		A8MWV9	139 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	FAM229A	H3BQW9	127 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324		M0R381	172 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324		M0R3E3	92 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	ZNF80	P51504	273 aa	Predicted RBP	4.52	□□□□□ -1.69
CIT-213	ENST00000543324	ERCC8	Q13216	396 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	PAPPA-AS1	Q5QFB9	102 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	TMEM78	Q5T7P6	136 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	C1orf134	Q5TEV5	83 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	C1orf158	Q8N1D5	194 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	POM121L12	Q8N7R1	296 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	NEXN-AS1	Q8NBZ9	246 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	TOMM6	Q96B49	74 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	MRPL53	Q96EL3	112 aa	Known RBP	4.52	□□□□□ -1.69
CIT-213	ENST00000543324	XCL2	Q9UBD3	114 aa		4.52	□□□□□ -1.69
CIT-213	ENST00000543324	TRBV7-9	A0A0J9YWB2	115 aa		4.51	□□□□□ -1.69
CIT-213	ENST00000543324	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.51	□□□□□ -1.69
CIT-213	ENST00000543324	SMR3B	P02814	79 aa	Predicted RBP	4.51	□□□□□ -1.69
CIT-213	ENST00000543324		P0DMU3	169 aa		4.51	□□□□□ -1.69
CIT-213	ENST00000543324	FAM231A	P0DMU4	169 aa		4.51	□□□□□ -1.69
CIT-213	ENST00000543324	FAM231C	P0DMU5	169 aa		4.51	□□□□□ -1.69
CIT-213	ENST00000543324	RPL32	P62910	135 aa	Known RBP	4.51	□□□□□ -1.69
CIT-213	ENST00000543324	SLC50A1	Q9BRV3	221 aa		4.51	□□□□□ -1.69
CIT-213	ENST00000543324	SMIM2	Q9BVW6	85 aa		4.51	□□□□□ -1.69
CIT-213	ENST00000543324	SPANXD	Q9BXN6	97 aa		4.51	□□□□□ -1.69
CIT-213	ENST00000543324	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.5	□□□□□ -1.69
CIT-213	ENST00000543324	PLAC8L1	A1L4L8	177 aa		4.5	□□□□□ -1.69
CIT-213	ENST00000543324		F6UB75	175 aa		4.5	□□□□□ -1.69
CIT-213	ENST00000543324	TCL1B	O95988	128 aa		4.5	□□□□□ -1.69
CIT-213	ENST00000543324	OXT	P01178	125 aa		4.5	□□□□□ -1.69
CIT-213	ENST00000543324	IGKV2D-40	P01614	121 aa	Predicted RBP	4.5	□□□□□ -1.69
CIT-213	ENST00000543324	RPL13A	P40429	203 aa	Known RBP	4.5	□□□□□ -1.69
CIT-213	ENST00000543324	ID1	P41134	155 aa		4.5	□□□□□ -1.69
CIT-213	ENST00000543324	PSMB2	P49721	201 aa		4.5	□□□□□ -1.69
CIT-213	ENST00000543324	C10orf126	Q8N4M7	172 aa		4.5	□□□□□ -1.69
CIT-213	ENST00000543324	PRADC1	Q9BSG0	188 aa		4.5	□□□□□ -1.69
CIT-213	ENST00000543324	KRTAP4-8	Q9BYQ9	185 aa		4.5	□□□□□ -1.69
CIT-213	ENST00000543324	MSRB1	Q9NZV6	116 aa		4.5	□□□□□ -1.69
CIT-213	ENST00000543324	SS18L2	Q9UHA2	77 aa		4.5	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms