RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 LINC00467Q9BRT7 94 aa14.63□□□□□ -0.07
HDAC4-215ENST00000543185 PMAIP1Q13794 54 aa14.63□□□□□ -0.07
HDAC4-215ENST00000543185 YPEL4Q96NS1 127 aa14.63□□□□□ -0.07
HDAC4-215ENST00000543185 IGLV4-3A0A075B6K6 122 aa14.63□□□□□ -0.07
HDAC4-215ENST00000543185 IGF2RP11717 2491 aa14.62□□□□□ -0.07
HDAC4-215ENST00000543185 LINC00269Q8N2A0 174 aa14.62□□□□□ -0.07
HDAC4-215ENST00000543185 WFDC11Q8NEX6 87 aa14.62□□□□□ -0.07
HDAC4-215ENST00000543185 ZNF22P17026 224 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-215ENST00000543185 CCDC179H3BU77 68 aa14.62□□□□□ -0.07
HDAC4-215ENST00000543185 MYCNOSP40205 109 aa14.62□□□□□ -0.07
HDAC4-215ENST00000543185 TRBV6-5A0A0K0K1A5 114 aa14.61□□□□□ -0.07
HDAC4-215ENST00000543185 IGLV2-8P01709 118 aa14.61□□□□□ -0.07
HDAC4-215ENST00000543185 C2orf91Q6ZV80 131 aa14.61□□□□□ -0.07
HDAC4-215ENST00000543185 MRPS12O15235 138 aaKnown RBP14.61□□□□□ -0.07
HDAC4-215ENST00000543185 UBE2D2P62837 147 aa14.61□□□□□ -0.07
HDAC4-215ENST00000543185 CHCHD10Q8WYQ3 142 aaPredicted RBP14.61□□□□□ -0.07
HDAC4-215ENST00000543185 IGKV1D-37A0A075B6S9 117 aa14.6□□□□□ -0.07
HDAC4-215ENST00000543185 SNURFQ9Y675 71 aa14.6□□□□□ -0.07
HDAC4-215ENST00000543185 SPRY2O43597 315 aa14.59□□□□□ -0.07
HDAC4-215ENST00000543185 FSTL3O95633 263 aa14.59□□□□□ -0.07
HDAC4-215ENST00000543185 DEFB135Q30KP9 77 aa14.59□□□□□ -0.07
HDAC4-215ENST00000543185 CDKN2A-AS1Q9UH64 79 aa14.59□□□□□ -0.07
HDAC4-215ENST00000543185 IGFL2Q6UWQ7 119 aa14.59□□□□□ -0.07
HDAC4-215ENST00000543185 NRACQ8N912 160 aa14.59□□□□□ -0.07
HDAC4-215ENST00000543185 MBD6Q96DN6 1003 aa14.59□□□□□ -0.07
HDAC4-215ENST00000543185 JMJD1CQ15652 2540 aa14.59□□□□□ -0.07
HDAC4-215ENST00000543185 NCOR2Q9Y618 2525 aa14.59□□□□□ -0.07
HDAC4-215ENST00000543185 M0QY20 66 aa14.59□□□□□ -0.07
HDAC4-215ENST00000543185 IGHV4-38-2P0DP08 117 aa14.59□□□□□ -0.07
HDAC4-215ENST00000543185 GDF5OSQ5U4N7 250 aa14.58□□□□□ -0.07
HDAC4-215ENST00000543185 LINC00526Q96FQ7 95 aa14.58□□□□□ -0.08
HDAC4-215ENST00000543185 LINC00694P0DN24 101 aa14.57□□□□□ -0.08
HDAC4-215ENST00000543185 MAP6D1Q9H9H5 199 aa14.57□□□□□ -0.08
HDAC4-215ENST00000543185 DEFB113Q30KQ7 82 aa14.57□□□□□ -0.08
HDAC4-215ENST00000543185 PLA2G2CQ5R387 149 aa14.56□□□□□ -0.08
HDAC4-215ENST00000543185 COL4A4P53420 1690 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-215ENST00000543185 EIF4EBP1Q13541 118 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-215ENST00000543185 C1orf158Q8N1D5 194 aa14.56□□□□□ -0.08
HDAC4-215ENST00000543185 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-215ENST00000543185 SIRPDQ9H106 197 aa14.56□□□□□ -0.08
HDAC4-215ENST00000543185 SMAD5-AS1Q9Y6J3 95 aa14.55□□□□□ -0.08
HDAC4-215ENST00000543185 C9orf85Q96MD7 179 aa14.55□□□□□ -0.08
HDAC4-215ENST00000543185 CNFNQ9BYD5 112 aa14.54□□□□□ -0.08
HDAC4-215ENST00000543185 USP9YO00507 2555 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-215ENST00000543185 C3orf84H3BNL1 204 aa14.54□□□□□ -0.08
HDAC4-215ENST00000543185 XGP55808 180 aa14.54□□□□□ -0.08
HDAC4-215ENST00000543185 HIGD2AQ9BW72 106 aa14.54□□□□□ -0.08
HDAC4-215ENST00000543185 M0QXV9 152 aa14.54□□□□□ -0.08
HDAC4-215ENST00000543185 SPTBN4Q9H254 2564 aa14.53□□□□□ -0.08
HDAC4-215ENST00000543185 FRMD6-AS1P0C7T7 363 aa14.53□□□□□ -0.08
HDAC4-215ENST00000543185 TRBV6-8A0A0A6YYG3 113 aa14.53□□□□□ -0.08
HDAC4-215ENST00000543185 TRBV6-4A0A1B0GX49 114 aa14.53□□□□□ -0.08
HDAC4-215ENST00000543185 CCDC140Q96MF4 163 aa14.52□□□□□ -0.08
HDAC4-215ENST00000543185 E7EUB6 86 aa14.52□□□□□ -0.08
HDAC4-215ENST00000543185 CRYGDP07320 174 aa14.52□□□□□ -0.08
HDAC4-215ENST00000543185 CD164L2Q6UWJ8 174 aa14.51□□□□□ -0.09
HDAC4-215ENST00000543185 UNQ9165/PRO28630Q6UXU0 137 aa14.51□□□□□ -0.09
HDAC4-215ENST00000543185 ZNF80P51504 273 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-215ENST00000543185 CEMP1Q6PRD7 247 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-215ENST00000543185 IGHV4-61A0A0C4DH41 118 aa14.5□□□□□ -0.09
HDAC4-215ENST00000543185 LINC00322Q6ZN03 302 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-215ENST00000543185 PIP4P1Q86T03 277 aa14.5□□□□□ -0.09
HDAC4-215ENST00000543185 COL27A1Q8IZC6 1860 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-215ENST00000543185 M0R378 163 aa14.5□□□□□ -0.09
HDAC4-215ENST00000543185 C6orf99Q4VX62 202 aa14.49□□□□□ -0.09
HDAC4-215ENST00000543185 ODF3BA8MYP8 253 aa14.49□□□□□ -0.09
HDAC4-215ENST00000543185 IGF1P05019 195 aa14.49□□□□□ -0.09
HDAC4-215ENST00000543185 LINC00474Q9P2X8 69 aa14.49□□□□□ -0.09
HDAC4-215ENST00000543185 C11orf45Q8TAV5 145 aa14.49□□□□□ -0.09
HDAC4-215ENST00000543185 SPRNQ5BIV9 151 aa14.48□□□□□ -0.09
HDAC4-215ENST00000543185 FAM19A1Q7Z5A9 133 aa14.48□□□□□ -0.09
HDAC4-215ENST00000543185 RNF185Q96GF1 192 aa14.48□□□□□ -0.09
HDAC4-215ENST00000543185 SCXQ7RTU7 201 aa14.48□□□□□ -0.09
HDAC4-215ENST00000543185 DAZAP2Q15038 168 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-215ENST00000543185 MAPKAPK5-AS1Q8N8E1 139 aa14.47□□□□□ -0.09
HDAC4-215ENST00000543185 MRGPRG-AS1Q2M3A8 158 aa14.47□□□□□ -0.09
HDAC4-215ENST00000543185 WFDC10AQ9H1F0 79 aa14.47□□□□□ -0.09
HDAC4-215ENST00000543185 A0A087WZ39 114 aa14.46□□□□□ -0.09
HDAC4-215ENST00000543185 SLPIP03973 132 aa14.46□□□□□ -0.09
HDAC4-215ENST00000543185 PRYO14603 147 aa14.46□□□□□ -0.09
HDAC4-215ENST00000543185 ZNF73O43830 326 aaPredicted RBP14.46□□□□□ -0.1
HDAC4-215ENST00000543185 CLUHP3Q96NS8 147 aa14.45□□□□□ -0.1
HDAC4-215ENST00000543185 IGHV4-30-2A0A087WSY4 118 aa14.45□□□□□ -0.1
HDAC4-215ENST00000543185 UBE2D4Q9Y2X8 147 aa14.45□□□□□ -0.1
HDAC4-215ENST00000543185 C7orf33Q8WU49 177 aa14.45□□□□□ -0.1
HDAC4-215ENST00000543185 FBXL19-AS1Q494R0 122 aa14.44□□□□□ -0.1
HDAC4-215ENST00000543185 Q8N7P7 452 aa14.44□□□□□ -0.1
HDAC4-215ENST00000543185 COL4A3Q01955 1670 aa14.44□□□□□ -0.1
HDAC4-215ENST00000543185 J3QKU1 62 aa14.44□□□□□ -0.1
HDAC4-215ENST00000543185 K7EQG2 157 aa14.44□□□□□ -0.1
HDAC4-215ENST00000543185 MUC22E2RYF6 1773 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-215ENST00000543185 Q6ZTI0 123 aa14.43□□□□□ -0.1
HDAC4-215ENST00000543185 UBE2D3P61077 147 aa14.43□□□□□ -0.1
HDAC4-215ENST00000543185 IGKV2-24A0A0C4DH68 120 aa14.43□□□□□ -0.1
HDAC4-215ENST00000543185 IGLV2-11P01706 119 aa14.42□□□□□ -0.1
HDAC4-215ENST00000543185 HRCT1Q6UXD1 115 aa14.42□□□□□ -0.1
HDAC4-215ENST00000543185 Q6ZQY7 126 aa14.42□□□□□ -0.1
HDAC4-215ENST00000543185 LINC01548A6NM66 108 aa14.42□□□□□ -0.1
HDAC4-215ENST00000543185 TP53TG3Q9ULZ0 132 aa14.42□□□□□ -0.1
HDAC4-215ENST00000543185 MTORP42345 2549 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms