RNA–Protein interactions for RNA: ENST00000542966.1

SCNN1A-219, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 560 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-219ENST00000542966 TRGC2P03986 189 aa10.84□□□□□ -0.67
SCNN1A-219ENST00000542966 ST20Q9HBF5 79 aa10.84□□□□□ -0.67
SCNN1A-219ENST00000542966 HERC1Q15751 4861 aa10.83□□□□□ -0.68
SCNN1A-219ENST00000542966 SDHAF1A6NFY7 115 aa10.83□□□□□ -0.68
SCNN1A-219ENST00000542966 POLR2KP53803 58 aaKnown RBP10.83□□□□□ -0.68
SCNN1A-219ENST00000542966 SUMO2P61956 95 aaKnown RBP10.83□□□□□ -0.68
SCNN1A-219ENST00000542966 MIAQ16674 131 aa10.83□□□□□ -0.68
SCNN1A-219ENST00000542966 C20orf78Q9BR46 151 aa10.83□□□□□ -0.68
SCNN1A-219ENST00000542966 TMEM243Q9BU79 118 aa10.83□□□□□ -0.68
SCNN1A-219ENST00000542966 LAMTOR2Q9Y2Q5 125 aa10.83□□□□□ -0.68
SCNN1A-219ENST00000542966 PRR34Q9NV39 138 aa10.82□□□□□ -0.68
SCNN1A-219ENST00000542966 AMTP48728 403 aa10.81□□□□□ -0.68
SCNN1A-219ENST00000542966 RPL32P62910 135 aaKnown RBP10.81□□□□□ -0.68
SCNN1A-219ENST00000542966 COTL1Q14019 142 aa10.81□□□□□ -0.68
SCNN1A-219ENST00000542966 TRBV27A0A0K0K1C4 114 aa10.8□□□□□ -0.68
SCNN1A-219ENST00000542966 PRSS47A8MTI9 375 aa10.8□□□□□ -0.68
SCNN1A-219ENST00000542966 UBE2L6O14933 153 aa10.8□□□□□ -0.68
SCNN1A-219ENST00000542966 REG3AQ06141 175 aa10.8□□□□□ -0.68
SCNN1A-219ENST00000542966 C20orf203Q8NBC4 194 aa10.8□□□□□ -0.68
SCNN1A-219ENST00000542966 SMIM2Q9BVW6 85 aa10.8□□□□□ -0.68
SCNN1A-219ENST00000542966 IGLV4-60A0A075B6I1 120 aa10.79□□□□□ -0.68
SCNN1A-219ENST00000542966 IGLV10-54A0A075B6I4 117 aa10.79□□□□□ -0.68
SCNN1A-219ENST00000542966 USP17L23D6RBM5 183 aa10.79□□□□□ -0.68
SCNN1A-219ENST00000542966 INAFM2P0DMQ5 153 aa10.79□□□□□ -0.68
SCNN1A-219ENST00000542966 C14orf177Q52M58 125 aa10.79□□□□□ -0.68
SCNN1A-219ENST00000542966 MAP1LC3AQ9H492 121 aa10.79□□□□□ -0.68
SCNN1A-219ENST00000542966 LOC389332A0A1B0GUA5 103 aa10.78□□□□□ -0.68
SCNN1A-219ENST00000542966 FAM229AH3BQW9 127 aa10.78□□□□□ -0.68
SCNN1A-219ENST00000542966 I3L3M4 83 aa10.78□□□□□ -0.68
SCNN1A-219ENST00000542966 VCYO14598 125 aa10.78□□□□□ -0.68
SCNN1A-219ENST00000542966 TSHBP01222 138 aa10.78□□□□□ -0.68
SCNN1A-219ENST00000542966 PMCHP20382 165 aa10.78□□□□□ -0.68
SCNN1A-219ENST00000542966 Q6ZSA8 131 aa10.78□□□□□ -0.68
SCNN1A-219ENST00000542966 C18orf32Q8TCD1 76 aa10.78□□□□□ -0.68
SCNN1A-219ENST00000542966 A0A1B0GUV1 79 aa10.77□□□□□ -0.69
SCNN1A-219ENST00000542966 KRTAP26-1Q6PEX3 210 aa10.77□□□□□ -0.69
SCNN1A-219ENST00000542966 Q8N8P6 123 aa10.76□□□□□ -0.69
SCNN1A-219ENST00000542966 VPS13BQ7Z7G8 4022 aa10.75□□□□□ -0.69
SCNN1A-219ENST00000542966 PRSS1P07477 247 aa10.75□□□□□ -0.69
SCNN1A-219ENST00000542966 IFI27P40305 119 aaPredicted RBP10.75□□□□□ -0.69
SCNN1A-219ENST00000542966 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.74□□□□□ -0.69
SCNN1A-219ENST00000542966 IGKV2-29A2NJV5 120 aaPredicted RBP10.74□□□□□ -0.69
SCNN1A-219ENST00000542966 TCAPO15273 167 aa10.74□□□□□ -0.69
SCNN1A-219ENST00000542966 SCXQ7RTU7 201 aa10.74□□□□□ -0.69
SCNN1A-219ENST00000542966 URB1-AS1Q96HZ7 61 aa10.74□□□□□ -0.69
SCNN1A-219ENST00000542966 KIR2DL4Q99706 377 aa10.74□□□□□ -0.69
SCNN1A-219ENST00000542966 NXT2Q9NPJ8 142 aaKnown RBP10.74□□□□□ -0.69
SCNN1A-219ENST00000542966 TRAV8-4A0A0B4J246 113 aa10.73□□□□□ -0.69
SCNN1A-219ENST00000542966 IGKV3OR2-268A0A0C4DH90 116 aa10.73□□□□□ -0.69
SCNN1A-219ENST00000542966 PRSS3P2Q8NHM4 247 aa10.73□□□□□ -0.69
SCNN1A-219ENST00000542966 HIST1H2BKO60814 126 aa10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 HIST1H2BJP06899 126 aa10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 ESDP10768 282 aa10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 HIST1H2BOP23527 126 aa10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 FCER1GP30273 86 aa10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 HIST1H2BBP33778 126 aa10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 HIST1H2BDP58876 126 aa10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 HIST1H2BCP62807 126 aa10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 HIST2H2BEQ16778 126 aa10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 AMMECR1LQ6DCA0 310 aa10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 HIST1H2BHQ93079 126 aa10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 HIST1H2BNQ99877 126 aa10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 HIST1H2BMQ99879 126 aa10.72□□□□□ -0.69
SCNN1A-219ENST00000542966 LINC01546A6NGU7 62 aa10.71□□□□□ -0.69
SCNN1A-219ENST00000542966 C1orf196B1AJZ1 125 aa10.71□□□□□ -0.69
SCNN1A-219ENST00000542966 RNASEKQ6P5S7 137 aaKnown RBP10.71□□□□□ -0.69
SCNN1A-219ENST00000542966 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.69
SCNN1A-219ENST00000542966 FA2HQ7L5A8 372 aa10.7□□□□□ -0.7
SCNN1A-219ENST00000542966 CHAC1Q9BUX1 264 aa10.7□□□□□ -0.7
SCNN1A-219ENST00000542966 hDV102S1A0JD36 115 aa10.69□□□□□ -0.7
SCNN1A-219ENST00000542966 FGF6P10767 208 aa10.69□□□□□ -0.7
SCNN1A-219ENST00000542966 LINC00310P59036 64 aa10.69□□□□□ -0.7
SCNN1A-219ENST00000542966 DGAT2L7PQ6IED9 249 aa10.69□□□□□ -0.7
SCNN1A-219ENST00000542966 CIRBP-AS1Q8TBR5 109 aa10.69□□□□□ -0.7
SCNN1A-219ENST00000542966 DMBT1Q9UGM3 2413 aaPredicted RBP10.69□□□□□ -0.7
SCNN1A-219ENST00000542966 GAGE12HA6NDE8 117 aa10.68□□□□□ -0.7
SCNN1A-219ENST00000542966 H7C423 109 aa10.68□□□□□ -0.7
SCNN1A-219ENST00000542966 K7EMI3 77 aa10.68□□□□□ -0.7
SCNN1A-219ENST00000542966 LINC00614P0C842 121 aa10.68□□□□□ -0.7
SCNN1A-219ENST00000542966 BAGE3Q86Y29 109 aa10.68□□□□□ -0.7
SCNN1A-219ENST00000542966 PLA2G1BP04054 148 aaKnown RBP10.67□□□□□ -0.7
SCNN1A-219ENST00000542966 ORMDL2Q53FV1 153 aa10.67□□□□□ -0.7
SCNN1A-219ENST00000542966 C9orf163Q8N9P6 203 aa10.67□□□□□ -0.7
SCNN1A-219ENST00000542966 SERF1AO75920 110 aa10.66□□□□□ -0.7
SCNN1A-219ENST00000542966 RAB5BP61020 215 aa10.66□□□□□ -0.7
SCNN1A-219ENST00000542966 RPL39P62891 51 aaKnown RBP10.66□□□□□ -0.7
SCNN1A-219ENST00000542966 AP5S1Q9NUS5 200 aa10.66□□□□□ -0.7
SCNN1A-219ENST00000542966 ZNF25P17030 456 aaPredicted RBP10.65□□□□□ -0.7
SCNN1A-219ENST00000542966 CHCHD10Q8WYQ3 142 aaPredicted RBP10.65□□□□□ -0.7
SCNN1A-219ENST00000542966 CHCHD1Q96BP2 118 aaKnown RBP10.65□□□□□ -0.7
SCNN1A-219ENST00000542966 TMEM101Q96IK0 257 aa10.65□□□□□ -0.7
SCNN1A-219ENST00000542966 A0A096LNJ9 63 aa10.64□□□□□ -0.71
SCNN1A-219ENST00000542966 NUPR1O60356 82 aa10.64□□□□□ -0.71
SCNN1A-219ENST00000542966 PMCHL1Q16048 86 aa10.64□□□□□ -0.71
SCNN1A-219ENST00000542966 C2orf66Q6UXQ4 117 aa10.64□□□□□ -0.71
SCNN1A-219ENST00000542966 SLPIP03973 132 aa10.63□□□□□ -0.71
SCNN1A-219ENST00000542966 CNBPP62633 177 aaKnown RBP10.63□□□□□ -0.71
SCNN1A-219ENST00000542966 COA6Q5JTJ3 125 aaKnown RBP10.63□□□□□ -0.71
SCNN1A-219ENST00000542966 MRPL52Q86TS9 123 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms