RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CITED2Q99967 270 aaPredicted RBP3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 CHCHD7Q9BUK0 85 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 GTSF1LQ9H1H1 148 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 SPANXA1Q9NS26 97 aa3.77□□□□□ -1.81
ATPAF1-212ENST00000542495 IGHV1-58A0A0C4DH39 117 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 TINCRA0A1B0GVN0 87 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 IGHV3-30-3P0DP02 117 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 CD28P10747 220 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 ZNF415Q09FC8 603 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 MUSTN1Q8IVN3 82 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 TMEM61Q8N0U2 210 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 C4orf3Q8WVX3 66 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 PPDPFLQ8WWR9 84 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 DNAJC30Q96LL9 226 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 CARD19Q96LW7 228 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 BEX4Q9NWD9 120 aaPredicted RBP3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 UBE2D4Q9Y2X8 147 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 SETD2Q9BYW2 2564 aaPredicted RBP3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 RS1O15537 224 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 IGHV3-53P01767 116 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 DEFB136Q30KP8 78 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 SFTA2Q6UW10 78 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 MAPK1IP1LQ8NDC0 245 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 RNF183Q96D59 192 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 DUX3Q96PT4 197 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 SPXQ9BT56 116 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 TIMM21Q9BVV7 248 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 SPANXDQ9BXN6 97 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 MAP6D1Q9H9H5 199 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 SPANXCQ9NY87 97 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 PEMTQ9UBM1 199 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 Q9UF83 564 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 TNFRSF18Q9Y5U5 241 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 NACAE9PAV3 2078 aa3.76□□□□□ -1.81
ATPAF1-212ENST00000542495 CR1P17927 2039 aa3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 CSPG4Q6UVK1 2322 aa3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 IGHV3-64A0A075B6Q5 118 aa3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 IGLV5-45A0A087WSX0 123 aa3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 IGHV3-73A0A0B4J1V6 119 aa3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 PRM2P04554 102 aa3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 SMAGPQ0VAQ4 97 aa3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 DEFB114Q30KQ6 69 aa3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 CEMP1Q6PRD7 247 aaPredicted RBP3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 IL17DQ8TAD2 202 aa3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 ZNF418Q8TF45 676 aaPredicted RBP3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 VSIG2Q96IQ7 327 aa3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 ERG28Q9UKR5 140 aa3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 PRRC2AP48634 2157 aaKnown RBP3.75□□□□□ -1.81
ATPAF1-212ENST00000542495 SPG11Q96JI7 2443 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 TRAV8-3A0A0A6YYJ7 113 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 TRBV30A0A0K0K1B3 111 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 TIMM17BO60830 172 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 ZFAND6Q6FIF0 208 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 FAM19A3Q7Z5A8 133 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 LRRC75A-AS1Q8N1F1 130 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 ZNF469Q96JG9 3925 aaPredicted RBP3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 MTORP42345 2549 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 NF1P21359 2839 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 ITPR3Q14573 2671 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 TRAV25A0A0B4J276 109 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 TRIAP1O43715 76 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 SLC25A20O43772 301 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 INSP01308 110 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 SCGB1C2P0DMR2 95 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 HTN1P15515 57 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 MIAQ16674 131 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 DEFB113Q30KQ7 82 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 ADAMTSL4-AS1Q5T5F5 129 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 Q6ZUT4 128 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 TMEM86BQ8N661 226 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 ANKRD29Q8N6D5 301 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 LINC01587Q99440 93 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 NDUFA12Q9UI09 145 aa3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.74□□□□□ -1.81
ATPAF1-212ENST00000542495 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.73□□□□□ -1.81
ATPAF1-212ENST00000542495 IGLV5-39A0A0G2JS06 123 aa3.73□□□□□ -1.81
ATPAF1-212ENST00000542495 IGKV2-29A2NJV5 120 aaPredicted RBP3.73□□□□□ -1.81
ATPAF1-212ENST00000542495 ATXN8Q156A1 80 aa3.73□□□□□ -1.81
ATPAF1-212ENST00000542495 ODF3L2Q3SX64 289 aa3.73□□□□□ -1.81
ATPAF1-212ENST00000542495 RNASE13Q5GAN3 156 aaKnown RBP3.73□□□□□ -1.81
ATPAF1-212ENST00000542495 DYNLRB2Q8TF09 96 aa3.73□□□□□ -1.81
ATPAF1-212ENST00000542495 SORL1Q92673 2214 aa3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 C9JAW5 83 aa3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 NDUFA1O15239 70 aa3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 SPINK8P0C7L1 97 aa3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 IFITM1P13164 125 aa3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 RPL13AP40429 203 aaKnown RBP3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 XGP55808 180 aa3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 LINC01620Q4KN68 170 aa3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 C1orf158Q8N1D5 194 aa3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 YAE1D1Q9NRH1 226 aa3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 CDKN2A-AS1Q9UH64 79 aa3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 CSDC2Q9Y534 153 aaKnown RBP3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 NIPBLQ6KC79 2804 aaeCLIP3.72□□□□□ -1.81
ATPAF1-212ENST00000542495 IGHV3OR16-12A0A075B7B8 117 aa3.71□□□□□ -1.81
ATPAF1-212ENST00000542495 IGHV3-38A0A0C4DH36 116 aa3.71□□□□□ -1.81
ATPAF1-212ENST00000542495 TRBV10-1A0A0K0K1A3 114 aa3.71□□□□□ -1.81
ATPAF1-212ENST00000542495 TRBV10-2A0A0K0K1G8 114 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms