RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ZNHIT1O43257 154 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 CRPP02741 224 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 FAM229BQ4G0N7 80 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 LINC01554Q52M75 96 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 Q75L30 129 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 NOTCH2NLQ7Z3S9 236 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 GPHB5Q86YW7 130 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 DEFB119Q8N690 84 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 C9orf106Q8NAJ2 232 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 C20orf203Q8NBC4 194 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 ZNF625Q96I27 306 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-219ENST00000542112 CDC42SE1Q9NRR8 79 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 SNURFQ9Y675 71 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 DOCK7Q96N67 2140 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 FREM1Q5H8C1 2179 aa3.07□□□□□ -1.92
SNHG1-219ENST00000542112 IGLV3-12A0A075B6K2 115 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 IGLV5-45A0A087WSX0 123 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 IGHV3-43A0A0B4J1X8 118 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 TRAV21A0A0B4J279 112 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 IGHV3OR16-9A0A0B4J2B5 98 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 IGHV4-28A0A0C4DH34 117 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 LCE6AA0A183 80 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 DEFB108AA8MXU0 73 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 H0Y9J4 135 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 BUB1B-PAK6H3BSN5 160 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 MRPL33O75394 65 aaKnown RBP3.06□□□□□ -1.92
SNHG1-219ENST00000542112 LY6HO94772 140 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 IGHV3-43DP0DP04 118 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 RPL27AP46776 148 aaKnown RBP3.06□□□□□ -1.92
SNHG1-219ENST00000542112 LINC01547P58512 204 aaPredicted RBP3.06□□□□□ -1.92
SNHG1-219ENST00000542112 C9orf66Q5T8R8 295 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 FAM74A4Q5TZK3 123 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 MUC6Q6W4X9 2439 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 C9orf47Q6ZRZ4 202 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 FAM19A3Q7Z5A8 133 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 TMEM105Q8N8V8 129 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 ZNF407Q9C0G0 2248 aa3.06□□□□□ -1.92
SNHG1-219ENST00000542112 CEP250Q9BV73 2442 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 POLEQ07864 2286 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 TET2Q6N021 2002 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-219ENST00000542112 LAMA1P25391 3075 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 LOC101927531A0A1B0GV80 90 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 KLLNB2CW77 178 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 HCG22E2RYF7 251 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 I3L2K1 104 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 BPY2O14599 106 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 PSCAO43653 123 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 IGKV1-17P01599 117 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 PRM2P04554 102 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 LINC00205P59089 165 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 Q5VV11 94 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 MIR7-3HGQ8N6C7 128 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 WDR87Q6ZQQ6 2873 aa3.05□□□□□ -1.92
SNHG1-219ENST00000542112 NACAE9PAV3 2078 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 IGLV4-3A0A075B6K6 122 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 IGKV2-40A0A087WW87 121 aaPredicted RBP3.04□□□□□ -1.92
SNHG1-219ENST00000542112 C16orf90A8MZG2 172 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 SRRM5B3KS81 715 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 C3orf84H3BNL1 204 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 IGKV2D-40P01614 121 aaPredicted RBP3.04□□□□□ -1.92
SNHG1-219ENST00000542112 IGKV1-16P04430 117 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 SEC61BP60468 96 aaKnown RBP3.04□□□□□ -1.92
SNHG1-219ENST00000542112 C17orf58Q2M2W7 97 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 DEFB133Q30KQ1 61 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 C1orf64Q8NEQ6 169 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 FAM218AQ96MZ4 157 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 Q9BRP9 147 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 DEFB126Q9BYW3 111 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 CUL9Q8IWT3 2517 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 ZNF292O60281 2723 aa3.04□□□□□ -1.92
SNHG1-219ENST00000542112 USP34Q70CQ2 3546 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 GVINP1Q7Z2Y8 2422 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 TRAV10A0A0B4J240 114 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 KRTAP4-8A0A0G2JLE6 195 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 A0A0J9YXV3 536 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 CHKB-CPT1BH3BT56 60 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 IGLV2-23P01705 113 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 DEFB110Q30KQ9 67 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 ODF3L2Q3SX64 289 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 FBXL19-AS1Q494R0 122 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 C9orf116Q5BN46 136 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-219ENST00000542112 LCE5AQ5TCM9 118 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 RPL39LQ96EH5 51 aaKnown RBP3.03□□□□□ -1.92
SNHG1-219ENST00000542112 OCR1Q9BZK8 76 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 Q9HAA7 133 aa3.03□□□□□ -1.92
SNHG1-219ENST00000542112 URB1O60287 2271 aaKnown RBP3.03□□□□□ -1.92
SNHG1-219ENST00000542112 DSCAMO60469 2012 aa3.02□□□□□ -1.93
SNHG1-219ENST00000542112 PTPRZ1P23471 2315 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-219ENST00000542112 DNAJC9-AS1A6NH13 148 aa3.02□□□□□ -1.93
SNHG1-219ENST00000542112 INAFM1C9JVW0 142 aa3.02□□□□□ -1.93
SNHG1-219ENST00000542112 PSPHP1O15172 72 aa3.02□□□□□ -1.93
SNHG1-219ENST00000542112 LY6G6DO95868 133 aa3.02□□□□□ -1.93
SNHG1-219ENST00000542112 MGPP08493 103 aa3.02□□□□□ -1.93
SNHG1-219ENST00000542112 LINC00313P59037 77 aa3.02□□□□□ -1.93
SNHG1-219ENST00000542112 LINC00315P59091 139 aa3.02□□□□□ -1.93
SNHG1-219ENST00000542112 Q6ZQT0 140 aa3.02□□□□□ -1.93
SNHG1-219ENST00000542112 ITLN2Q8WWU7 325 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-219ENST00000542112 CDC42SE2Q9NRR3 84 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms