RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 GNRH2O43555 120 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 DNAL4O96015 105 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 FREM3P0C091 2139 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 SPTBP11277 2137 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 SYCNQ0VAF6 134 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 DEFB116Q30KQ4 102 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 PIGYQ3MUY2 71 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 C10orf113Q5VZT2 155 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 NTM-AS1Q6ZSK4 140 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 LINC00269Q8N2A0 174 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 ITLN2Q8WWU7 325 aaPredicted RBP2.01□□□□□ -2.09
USP28-210ENST00000542033 LIMD2Q9BT23 127 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 TTTY13Q9BZ97 58 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 ICOSQ9Y6W8 199 aa2.01□□□□□ -2.09
USP28-210ENST00000542033 EML6Q6ZMW3 1958 aa2□□□□□ -2.09
USP28-210ENST00000542033 hDV103S1A0JD37 113 aa2□□□□□ -2.09
USP28-210ENST00000542033 C11orf86A6NJI1 115 aa2□□□□□ -2.09
USP28-210ENST00000542033 E7EUB6 86 aa2□□□□□ -2.09
USP28-210ENST00000542033 C3orf84H3BNL1 204 aa2□□□□□ -2.09
USP28-210ENST00000542033 KRTAP5-8O75690 187 aa2□□□□□ -2.09
USP28-210ENST00000542033 IGKV1-39P01597 117 aa2□□□□□ -2.09
USP28-210ENST00000542033 IGKV1D-39P04432 117 aa2□□□□□ -2.09
USP28-210ENST00000542033 ZNF137PP52743 207 aa2□□□□□ -2.09
USP28-210ENST00000542033 ERHP84090 104 aaKnown RBP2□□□□□ -2.09
USP28-210ENST00000542033 RNASE13Q5GAN3 156 aaKnown RBP2□□□□□ -2.09
USP28-210ENST00000542033 C10orf128Q5T292 105 aa2□□□□□ -2.09
USP28-210ENST00000542033 FAM27BQ5VT28 67 aa2□□□□□ -2.09
USP28-210ENST00000542033 PATE2Q6UY27 113 aa2□□□□□ -2.09
USP28-210ENST00000542033 MIR17HGQ75NE6 70 aa2□□□□□ -2.09
USP28-210ENST00000542033 Q8N6K4 173 aa2□□□□□ -2.09
USP28-210ENST00000542033 LINC01560Q8TB33 94 aa2□□□□□ -2.09
USP28-210ENST00000542033 CLEC2BQ92478 149 aa2□□□□□ -2.09
USP28-210ENST00000542033 OBSCN-AS1Q96MR7 158 aa2□□□□□ -2.09
USP28-210ENST00000542033 SCGB3A1Q96QR1 104 aa2□□□□□ -2.09
USP28-210ENST00000542033 C8orf17Q9NRJ1 99 aa2□□□□□ -2.09
USP28-210ENST00000542033 C2orf16Q68DN1 1984 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 IGKV2D-24A0A075B6R9 120 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 TRBV7-4A0A0J9YYF1 115 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 D6R8Y8 96 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 STATHP02808 62 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 CD52P31358 61 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 RPL27AP46776 148 aaKnown RBP1.99□□□□□ -2.09
USP28-210ENST00000542033 SFTA2Q6UW10 78 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 PRNTQ86SH4 94 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 LYPD1Q8N2G4 141 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 RMI2Q96E14 147 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 CHCHD7Q9BUK0 85 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 BPESC1Q9GZL8 116 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 XAGE1AQ9HD64 81 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 CDC42SE1Q9NRR8 79 aa1.99□□□□□ -2.09
USP28-210ENST00000542033 SNRNP200O75643 2136 aaKnown RBP1.99□□□□□ -2.09
USP28-210ENST00000542033 GOLGA4Q13439 2230 aaKnown RBP1.98□□□□□ -2.09
USP28-210ENST00000542033 IGHV1-45A0A0A0MS14 117 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 IGHV3-49A0A0A0MS15 119 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 TRAV22A0A0B4J277 110 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 IGKV1-6A0A0C4DH72 117 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 IGKV1-12A0A0C4DH73 117 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 C16orf90A8MZG2 172 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 HCG22E2RYF7 251 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 IGKV1D-12P01611 117 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 IGKV1-16P04430 117 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 NNATQ16517 81 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 FAM229BQ4G0N7 80 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 MYO7BQ6PIF6 2116 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 SOSTDC1Q6X4U4 206 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 CNFNQ9BYD5 112 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 NDUFA12Q9UI09 145 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 POLEQ07864 2286 aa1.98□□□□□ -2.09
USP28-210ENST00000542033 CACNA1CQ13936 2221 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 TNRC6BQ9UPQ9 1833 aaKnown RBP1.97□□□□□ -2.09
USP28-210ENST00000542033 IGLV2-18A0A075B6J9 118 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 IGKV2-28A0A075B6P5 120 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 A0A087WVE0 104 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 TRBV6-8A0A0A6YYG3 113 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 IGIPA6NJ69 53 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 JMJD7-PLA2G4BH0Y9G9 81 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 I3L3M4 83 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 LEPROTO15243 131 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 NDUFA3O95167 84 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 IGKV2D-28P01615 120 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 TRGV3P03979 118 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 ARMS2P0C7Q2 107 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 BAALC-AS2P0C853 105 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 RPL28P46779 137 aaKnown RBP1.97□□□□□ -2.09
USP28-210ENST00000542033 PDE6HQ13956 83 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 C9orf116Q5BN46 136 aaPredicted RBP1.97□□□□□ -2.09
USP28-210ENST00000542033 Q5W150 140 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 ZNF833PQ6ZTB9 187 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 TMEM254Q8TBM7 123 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 UBL5Q9BZL1 73 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 TMEM14BQ9NUH8 114 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 LINC00846Q9NV44 126 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 TMEM14CQ9P0S9 112 aa1.97□□□□□ -2.09
USP28-210ENST00000542033 IGLV3-9A0A075B6K5 115 aa1.96□□□□□ -2.1
USP28-210ENST00000542033 TRAV23DV6A0A075B6W5 121 aa1.96□□□□□ -2.1
USP28-210ENST00000542033 IGKV3D-7A0A0C4DH55 119 aa1.96□□□□□ -2.1
USP28-210ENST00000542033 LOC101927531A0A1B0GV80 90 aa1.96□□□□□ -2.1
USP28-210ENST00000542033 C17orf98A8MV24 154 aa1.96□□□□□ -2.1
USP28-210ENST00000542033 M0R3E3 92 aa1.96□□□□□ -2.1
USP28-210ENST00000542033 DEFA4P12838 97 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms