RNA–Protein interactions for RNA: ENST00000541694.5

LINC01089-208, Transcript of long intergenic non-protein coding RNA 1089, human

TSL 2

Gene LINC01089, Length 875 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01089-208	ENST00000541694	CSDC2	Q9Y534	153 aa	Known RBP	10.15	□□□□□ -0.78
LINC01089-208	ENST00000541694	DNAH1	Q9P2D7	4330 aa		10.14	□□□□□ -0.79
LINC01089-208	ENST00000541694		A0A096LNJ9	63 aa		10.14	□□□□□ -0.79
LINC01089-208	ENST00000541694	NUPR1	O60356	82 aa		10.14	□□□□□ -0.79
LINC01089-208	ENST00000541694	CRP	P02741	224 aa		10.14	□□□□□ -0.79
LINC01089-208	ENST00000541694	CLPSL2	Q6UWE3	100 aa		10.14	□□□□□ -0.79
LINC01089-208	ENST00000541694		Q6ZUT4	128 aa		10.14	□□□□□ -0.79
LINC01089-208	ENST00000541694	LINC00269	Q8N2A0	174 aa		10.14	□□□□□ -0.79
LINC01089-208	ENST00000541694	SCGB3A1	Q96QR1	104 aa		10.14	□□□□□ -0.79
LINC01089-208	ENST00000541694	KRTAP1-5	Q9BYS1	174 aa		10.14	□□□□□ -0.79
LINC01089-208	ENST00000541694	PYGO1	Q9Y3Y4	419 aa		10.14	□□□□□ -0.79
LINC01089-208	ENST00000541694	IBA57-AS1	B1ANH7	110 aa		10.13	□□□□□ -0.79
LINC01089-208	ENST00000541694	FAM19A2	Q8N3H0	131 aa		10.13	□□□□□ -0.79
LINC01089-208	ENST00000541694	ZNF664	Q8N3J9	261 aa		10.13	□□□□□ -0.79
LINC01089-208	ENST00000541694	UBE2W	Q96B02	151 aa		10.13	□□□□□ -0.79
LINC01089-208	ENST00000541694	CDC42SE2	Q9NRR3	84 aa		10.13	□□□□□ -0.79
LINC01089-208	ENST00000541694	IGKV3OR2-268	A0A0C4DH90	116 aa		10.12	□□□□□ -0.79
LINC01089-208	ENST00000541694	IGIP	A6NJ69	53 aa		10.12	□□□□□ -0.79
LINC01089-208	ENST00000541694	MRPS36	P82909	103 aa	Known RBP	10.12	□□□□□ -0.79
LINC01089-208	ENST00000541694	REG3A	Q06141	175 aa		10.12	□□□□□ -0.79
LINC01089-208	ENST00000541694	RNASE13	Q5GAN3	156 aa	Known RBP	10.12	□□□□□ -0.79
LINC01089-208	ENST00000541694	COA6	Q5JTJ3	125 aa	Known RBP	10.12	□□□□□ -0.79
LINC01089-208	ENST00000541694		Q6ZR54	194 aa		10.12	□□□□□ -0.79
LINC01089-208	ENST00000541694	ERAS	Q7Z444	233 aa		10.12	□□□□□ -0.79
LINC01089-208	ENST00000541694	TIMM17A	Q99595	171 aa		10.12	□□□□□ -0.79
LINC01089-208	ENST00000541694	OPRPN	Q99935	248 aa	Predicted RBP	10.12	□□□□□ -0.79
LINC01089-208	ENST00000541694		Q9HAA7	133 aa		10.12	□□□□□ -0.79
LINC01089-208	ENST00000541694	IGLV4-3	A0A075B6K6	122 aa		10.11	□□□□□ -0.79
LINC01089-208	ENST00000541694		Q6ZN92	141 aa		10.11	□□□□□ -0.79
LINC01089-208	ENST00000541694	TMEM141	Q96I45	108 aa		10.11	□□□□□ -0.79
LINC01089-208	ENST00000541694	PRR34	Q9NV39	138 aa		10.11	□□□□□ -0.79
LINC01089-208	ENST00000541694	SACS	Q9NZJ4	4579 aa		10.11	□□□□□ -0.79
LINC01089-208	ENST00000541694	TRAV8-3	A0A0A6YYJ7	113 aa		10.1	□□□□□ -0.79
LINC01089-208	ENST00000541694	S100A6	P06703	90 aa		10.1	□□□□□ -0.79
LINC01089-208	ENST00000541694	NPS	P0C0P6	89 aa		10.1	□□□□□ -0.79
LINC01089-208	ENST00000541694	PDZD11	Q5EBL8	140 aa		10.1	□□□□□ -0.79
LINC01089-208	ENST00000541694	ENHO	Q6UWT2	76 aa		10.1	□□□□□ -0.79
LINC01089-208	ENST00000541694	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.09	□□□□□ -0.79
LINC01089-208	ENST00000541694	ATP5L	O75964	103 aa		10.09	□□□□□ -0.79
LINC01089-208	ENST00000541694	PAPPA-AS1	Q5QFB9	102 aa		10.09	□□□□□ -0.79
LINC01089-208	ENST00000541694	TEX43	Q6ZNM6	134 aa		10.09	□□□□□ -0.79
LINC01089-208	ENST00000541694	FAM104A	Q969W3	186 aa		10.09	□□□□□ -0.79
LINC01089-208	ENST00000541694	VCX2	Q9H322	139 aa		10.09	□□□□□ -0.79
LINC01089-208	ENST00000541694	MIA	Q16674	131 aa		10.08	□□□□□ -0.8
LINC01089-208	ENST00000541694	DNAH6	Q9C0G6	4158 aa		10.08	□□□□□ -0.8
LINC01089-208	ENST00000541694	IFITM10	A6NMD0	228 aa		10.07	□□□□□ -0.8
LINC01089-208	ENST00000541694	LEPROTL1	O95214	131 aa		10.07	□□□□□ -0.8
LINC01089-208	ENST00000541694	FABP4	P15090	132 aa		10.07	□□□□□ -0.8
LINC01089-208	ENST00000541694	ZC2HC1B	Q5TFG8	222 aa		10.07	□□□□□ -0.8
LINC01089-208	ENST00000541694	C6orf223	Q8N319	242 aa		10.07	□□□□□ -0.8
LINC01089-208	ENST00000541694	RMI2	Q96E14	147 aa		10.07	□□□□□ -0.8
LINC01089-208	ENST00000541694	C2orf88	Q9BSF0	95 aa		10.07	□□□□□ -0.8
LINC01089-208	ENST00000541694	C1orf43	Q9BWL3	253 aa		10.07	□□□□□ -0.8
LINC01089-208	ENST00000541694	KMT2A	Q03164	3969 aa		10.07	□□□□□ -0.8
LINC01089-208	ENST00000541694	IGLV10-54	A0A075B6I4	117 aa		10.06	□□□□□ -0.8
LINC01089-208	ENST00000541694	IGKV2D-24	A0A075B6R9	120 aa		10.06	□□□□□ -0.8
LINC01089-208	ENST00000541694	TRAV13-1	A0A0B4J241	112 aa		10.06	□□□□□ -0.8
LINC01089-208	ENST00000541694	LINC00959	A0A1B0GUT2	108 aa		10.06	□□□□□ -0.8
LINC01089-208	ENST00000541694	SS18	Q15532	418 aa		10.06	□□□□□ -0.8
LINC01089-208	ENST00000541694	C1orf134	Q5TEV5	83 aa		10.06	□□□□□ -0.8
LINC01089-208	ENST00000541694	NFE4	Q86UQ8	179 aa		10.06	□□□□□ -0.8
LINC01089-208	ENST00000541694	BAALC	Q8WXS3	180 aa		10.06	□□□□□ -0.8
LINC01089-208	ENST00000541694	IFI27L1	Q96BM0	104 aa		10.06	□□□□□ -0.8
LINC01089-208	ENST00000541694	AMELX	Q99217	191 aa		10.06	□□□□□ -0.8
LINC01089-208	ENST00000541694	HSPB8	Q9UJY1	196 aa		10.06	□□□□□ -0.8
LINC01089-208	ENST00000541694	TRAV8-4	A0A0B4J246	113 aa		10.05	□□□□□ -0.8
LINC01089-208	ENST00000541694	LINC00173	Q6ZV60	143 aa		10.05	□□□□□ -0.8
LINC01089-208	ENST00000541694	TMA7	Q9Y2S6	64 aa	Known RBP	10.05	□□□□□ -0.8
LINC01089-208	ENST00000541694	HYDIN	Q4G0P3	5121 aa		10.05	□□□□□ -0.8
LINC01089-208	ENST00000541694	PRSS1	P07477	247 aa		10.04	□□□□□ -0.8
LINC01089-208	ENST00000541694	PMVK	Q15126	192 aa		10.04	□□□□□ -0.8
LINC01089-208	ENST00000541694	TM2D2	Q9BX73	214 aa		10.04	□□□□□ -0.8
LINC01089-208	ENST00000541694	CCL25	O15444	150 aa		10.03	□□□□□ -0.8
LINC01089-208	ENST00000541694	PSCA	O43653	123 aa		10.03	□□□□□ -0.8
LINC01089-208	ENST00000541694	S100A2	P29034	98 aa		10.03	□□□□□ -0.8
LINC01089-208	ENST00000541694	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.03	□□□□□ -0.8
LINC01089-208	ENST00000541694	XCL1	P47992	114 aa		10.02	□□□□□ -0.81
LINC01089-208	ENST00000541694	UBE2D1	P51668	147 aa		10.02	□□□□□ -0.81
LINC01089-208	ENST00000541694	SNRPE	P62304	92 aa	Known RBP	10.02	□□□□□ -0.81
LINC01089-208	ENST00000541694	HIST3H2BB	Q8N257	126 aa		10.02	□□□□□ -0.81
LINC01089-208	ENST00000541694	CST9L	Q9H4G1	147 aa		10.02	□□□□□ -0.81
LINC01089-208	ENST00000541694	COX11	Q9Y6N1	276 aa		10.02	□□□□□ -0.81
LINC01089-208	ENST00000541694	BIRC6	Q9NR09	4857 aa		10.01	□□□□□ -0.81
LINC01089-208	ENST00000541694	GAGE12H	A6NDE8	117 aa		10.01	□□□□□ -0.81
LINC01089-208	ENST00000541694	PRSS29P	A6NIE9	313 aa		10.01	□□□□□ -0.81
LINC01089-208	ENST00000541694		H0Y8G0	127 aa		10.01	□□□□□ -0.81
LINC01089-208	ENST00000541694		Q6ZRN7	208 aa	Predicted RBP	10.01	□□□□□ -0.81
LINC01089-208	ENST00000541694	PACRG	Q96M98	296 aa	Predicted RBP	10.01	□□□□□ -0.81
LINC01089-208	ENST00000541694	RYR2	Q92736	4967 aa		10.01	□□□□□ -0.81
LINC01089-208	ENST00000541694	MAP1LC3C	Q9BXW4	147 aa		10	□□□□□ -0.81
LINC01089-208	ENST00000541694	C5orf52	A6NGY3	159 aa		9.99	□□□□□ -0.81
LINC01089-208	ENST00000541694	SEC11A	P67812	179 aa		9.99	□□□□□ -0.81
LINC01089-208	ENST00000541694	LINC00242	Q5T6M2	205 aa		9.99	□□□□□ -0.81
LINC01089-208	ENST00000541694	KRTAP26-1	Q6PEX3	210 aa		9.99	□□□□□ -0.81
LINC01089-208	ENST00000541694	CD164L2	Q6UWJ8	174 aa		9.99	□□□□□ -0.81
LINC01089-208	ENST00000541694	TRAV12-1	A0A0B4J245	112 aa		9.98	□□□□□ -0.81
LINC01089-208	ENST00000541694		A0A0J9YXV3	536 aa		9.98	□□□□□ -0.81
LINC01089-208	ENST00000541694	GEMIN7	Q9H840	131 aa	Known RBP	9.98	□□□□□ -0.81
LINC01089-208	ENST00000541694	RTL8C	O15255	209 aa		9.97	□□□□□ -0.81
LINC01089-208	ENST00000541694	FOXI1	Q12951	378 aa		9.97	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms