RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 MRPS16Q9Y3D3 137 aaKnown RBP3.97□□□□□ -1.77
CDKN3-206ENST00000541304 CSDC2Q9Y534 153 aaKnown RBP3.97□□□□□ -1.77
CDKN3-206ENST00000541304 A0A1B0GUV1 79 aa3.96□□□□□ -1.78
CDKN3-206ENST00000541304 ATP5LO75964 103 aa3.96□□□□□ -1.78
CDKN3-206ENST00000541304 TSHBP01222 138 aa3.96□□□□□ -1.78
CDKN3-206ENST00000541304 IFI27P40305 119 aaPredicted RBP3.96□□□□□ -1.78
CDKN3-206ENST00000541304 RNASEKQ6P5S7 137 aaKnown RBP3.96□□□□□ -1.78
CDKN3-206ENST00000541304 C10orf126Q8N4M7 172 aa3.96□□□□□ -1.78
CDKN3-206ENST00000541304 C20orf203Q8NBC4 194 aa3.96□□□□□ -1.78
CDKN3-206ENST00000541304 TMEM101Q96IK0 257 aa3.96□□□□□ -1.78
CDKN3-206ENST00000541304 TIMM17AQ99595 171 aa3.96□□□□□ -1.78
CDKN3-206ENST00000541304 HSPB8Q9UJY1 196 aa3.96□□□□□ -1.78
CDKN3-206ENST00000541304 PYGO1Q9Y3Y4 419 aa3.96□□□□□ -1.78
CDKN3-206ENST00000541304 TRAV9-2A0A087WT02 112 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 A0A087WX48 190 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 LOC100131303A0A0U1RQF7 123 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 LOC389332A0A1B0GUA5 103 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 CCL25O15444 150 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 SERF1AO75920 110 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 TTC32Q5I0X7 151 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 LYPD5Q6UWN5 251 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 C2orf66Q6UXQ4 117 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 Q6ZN92 141 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 NIT1Q86X76 327 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 TOMM6Q96B49 74 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 TMEM141Q96I45 108 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 APLNQ9ULZ1 77 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 NBEAL2Q6ZNJ1 2754 aa3.95□□□□□ -1.78
CDKN3-206ENST00000541304 IGHV3-38A0A0C4DH36 116 aa3.94□□□□□ -1.78
CDKN3-206ENST00000541304 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.94□□□□□ -1.78
CDKN3-206ENST00000541304 GAS8-AS1O95177 125 aa3.94□□□□□ -1.78
CDKN3-206ENST00000541304 LEPROTL1O95214 131 aa3.94□□□□□ -1.78
CDKN3-206ENST00000541304 S100A2P29034 98 aa3.94□□□□□ -1.78
CDKN3-206ENST00000541304 SEC11AP67812 179 aa3.94□□□□□ -1.78
CDKN3-206ENST00000541304 MRPS36P82909 103 aaKnown RBP3.94□□□□□ -1.78
CDKN3-206ENST00000541304 LINC01556Q5JQF7 62 aa3.94□□□□□ -1.78
CDKN3-206ENST00000541304 CASC10Q5T4H9 136 aa3.94□□□□□ -1.78
CDKN3-206ENST00000541304 AMMECR1LQ6DCA0 310 aa3.94□□□□□ -1.78
CDKN3-206ENST00000541304 LGALS9CQ6DKI2 356 aa3.94□□□□□ -1.78
CDKN3-206ENST00000541304 DGAT2L7PQ6IED9 249 aa3.94□□□□□ -1.78
CDKN3-206ENST00000541304 ERASQ7Z444 233 aa3.94□□□□□ -1.78
CDKN3-206ENST00000541304 UBE2DNLQ8IWF7 75 aa3.94□□□□□ -1.78
CDKN3-206ENST00000541304 CHCHD5Q9BSY4 110 aa3.94□□□□□ -1.78
CDKN3-206ENST00000541304 NACAE9PAV3 2078 aa3.93□□□□□ -1.78
CDKN3-206ENST00000541304 SIVA1O15304 175 aa3.93□□□□□ -1.78
CDKN3-206ENST00000541304 TRIAP1O43715 76 aa3.93□□□□□ -1.78
CDKN3-206ENST00000541304 DNAH10OSP0CZ25 163 aa3.93□□□□□ -1.78
CDKN3-206ENST00000541304 FGF6P10767 208 aa3.93□□□□□ -1.78
CDKN3-206ENST00000541304 NDUFA6P56556 154 aa3.93□□□□□ -1.78
CDKN3-206ENST00000541304 ODF1Q14990 250 aa3.93□□□□□ -1.78
CDKN3-206ENST00000541304 NTM-AS1Q6ZSK4 140 aa3.93□□□□□ -1.78
CDKN3-206ENST00000541304 LINC00469Q8N7U9 141 aa3.93□□□□□ -1.78
CDKN3-206ENST00000541304 OR5A1Q8NGJ0 315 aa3.93□□□□□ -1.78
CDKN3-206ENST00000541304 C2orf88Q9BSF0 95 aa3.93□□□□□ -1.78
CDKN3-206ENST00000541304 UBE2D4Q9Y2X8 147 aa3.93□□□□□ -1.78
CDKN3-206ENST00000541304 STAB2Q8WWQ8 2551 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 TRAV12-1A0A0B4J245 112 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 TRAV8-4A0A0B4J246 113 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 C5orf52A6NGY3 159 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 CRPP02741 224 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 ESRGQ1W209 222 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 PDZD11Q5EBL8 140 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 TEX43Q6ZNM6 134 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 Q8N9P0 234 aaPredicted RBP3.92□□□□□ -1.78
CDKN3-206ENST00000541304 RMI2Q96E14 147 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 URB1-AS1Q96HZ7 61 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 SCGB3A1Q96QR1 104 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 MAP1LC3CQ9BXW4 147 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 Q9UF83 564 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 LINC00588Q9Y4M8 146 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 COL7A1Q02388 2944 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 TENM3Q9P273 2699 aa3.92□□□□□ -1.78
CDKN3-206ENST00000541304 TRAV8-3A0A0A6YYJ7 113 aa3.91□□□□□ -1.78
CDKN3-206ENST00000541304 C20orf202A1L168 122 aa3.91□□□□□ -1.78
CDKN3-206ENST00000541304 IGIPA6NJ69 53 aa3.91□□□□□ -1.78
CDKN3-206ENST00000541304 TMEM262E9PQX1 116 aa3.91□□□□□ -1.78
CDKN3-206ENST00000541304 RBX1P62877 108 aa3.91□□□□□ -1.78
CDKN3-206ENST00000541304 MIAQ16674 131 aa3.91□□□□□ -1.78
CDKN3-206ENST00000541304 ZFAND6Q6FIF0 208 aa3.91□□□□□ -1.78
CDKN3-206ENST00000541304 SPATA12Q7Z6I5 190 aa3.91□□□□□ -1.78
CDKN3-206ENST00000541304 HIST3H2BBQ8N257 126 aa3.91□□□□□ -1.78
CDKN3-206ENST00000541304 ZNF664Q8N3J9 261 aa3.91□□□□□ -1.78
CDKN3-206ENST00000541304 IFI27L1Q96BM0 104 aa3.91□□□□□ -1.78
CDKN3-206ENST00000541304 VCX2Q9H322 139 aa3.91□□□□□ -1.78
CDKN3-206ENST00000541304 PRR34Q9NV39 138 aa3.91□□□□□ -1.78
CDKN3-206ENST00000541304 IGLV4-3A0A075B6K6 122 aa3.9□□□□□ -1.79
CDKN3-206ENST00000541304 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.9□□□□□ -1.79
CDKN3-206ENST00000541304 A0A096LNJ9 63 aa3.9□□□□□ -1.79
CDKN3-206ENST00000541304 IGKV2-29A2NJV5 120 aaPredicted RBP3.9□□□□□ -1.79
CDKN3-206ENST00000541304 ANGP03950 147 aaKnown RBP3.9□□□□□ -1.79
CDKN3-206ENST00000541304 MALP21145 153 aa3.9□□□□□ -1.79
CDKN3-206ENST00000541304 PLNP26678 52 aa3.9□□□□□ -1.79
CDKN3-206ENST00000541304 SNRPEP62304 92 aaKnown RBP3.9□□□□□ -1.79
CDKN3-206ENST00000541304 RPL39P62891 51 aaKnown RBP3.9□□□□□ -1.79
CDKN3-206ENST00000541304 GAGE6Q13070 117 aa3.9□□□□□ -1.79
CDKN3-206ENST00000541304 PMVKQ15126 192 aa3.9□□□□□ -1.79
CDKN3-206ENST00000541304 MPV17L2Q567V2 206 aa3.9□□□□□ -1.79
CDKN3-206ENST00000541304 PET117Q6UWS5 81 aa3.9□□□□□ -1.79
CDKN3-206ENST00000541304 FAM19A3Q7Z5A8 133 aa3.9□□□□□ -1.79
CDKN3-206ENST00000541304 NFE4Q86UQ8 179 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms