RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 Q9UF83 564 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 KLK12Q9UKR0 248 aa3.77□□□□□ -1.81
SUDS3-202ENST00000541280 EPPK1P58107 5090 aaKnown RBP3.77□□□□□ -1.81
SUDS3-202ENST00000541280 IGKV2D-24A0A075B6R9 120 aa3.76□□□□□ -1.81
SUDS3-202ENST00000541280 TRAV8-4A0A0B4J246 113 aa3.76□□□□□ -1.81
SUDS3-202ENST00000541280 K7EN84 100 aa3.76□□□□□ -1.81
SUDS3-202ENST00000541280 ANGP03950 147 aaKnown RBP3.76□□□□□ -1.81
SUDS3-202ENST00000541280 COTL1Q14019 142 aa3.76□□□□□ -1.81
SUDS3-202ENST00000541280 LINC01551Q86U37 167 aa3.76□□□□□ -1.81
SUDS3-202ENST00000541280 MAPKAPK5-AS1Q8N8E1 139 aa3.76□□□□□ -1.81
SUDS3-202ENST00000541280 UBE2WQ96B02 151 aa3.76□□□□□ -1.81
SUDS3-202ENST00000541280 TMEM243Q9BU79 118 aa3.76□□□□□ -1.81
SUDS3-202ENST00000541280 RNASE7Q9H1E1 156 aaKnown RBP3.76□□□□□ -1.81
SUDS3-202ENST00000541280 MUC4Q99102 2169 aa3.76□□□□□ -1.81
SUDS3-202ENST00000541280 VPS13DQ5THJ4 4388 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 A0A1B0GUT8 65 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 A0A1B0GW15 77 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 UBE2L6O14933 153 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 SRP19P09132 144 aaKnown RBP3.75□□□□□ -1.81
SUDS3-202ENST00000541280 NKX2-5P52952 324 aaPredicted RBP3.75□□□□□ -1.81
SUDS3-202ENST00000541280 CEBPGP53567 150 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 RBX1P62877 108 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 SMAGPQ0VAQ4 97 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 RIGQ13278 110 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 UBE2V1Q13404 147 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 NTM-AS1Q6ZSK4 140 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 GTSF1Q8WW33 167 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 PRR34Q9NV39 138 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 NAT8BQ9UHF3 227 aa3.75□□□□□ -1.81
SUDS3-202ENST00000541280 IGLV9-49A0A0B4J1Y8 123 aa3.74□□□□□ -1.81
SUDS3-202ENST00000541280 TRBV6-5A0A0K0K1A5 114 aa3.74□□□□□ -1.81
SUDS3-202ENST00000541280 HIGD1CA8MV81 97 aa3.74□□□□□ -1.81
SUDS3-202ENST00000541280 EPM2AB3EWF7 344 aa3.74□□□□□ -1.81
SUDS3-202ENST00000541280 I3L3M4 83 aa3.74□□□□□ -1.81
SUDS3-202ENST00000541280 S100A8P05109 93 aa3.74□□□□□ -1.81
SUDS3-202ENST00000541280 RAB14P61106 215 aa3.74□□□□□ -1.81
SUDS3-202ENST00000541280 MPV17L2Q567V2 206 aa3.74□□□□□ -1.81
SUDS3-202ENST00000541280 CFAP161Q6P656 301 aa3.74□□□□□ -1.81
SUDS3-202ENST00000541280 ENHOQ6UWT2 76 aa3.74□□□□□ -1.81
SUDS3-202ENST00000541280 MRAP2Q96G30 205 aa3.74□□□□□ -1.81
SUDS3-202ENST00000541280 TMEM191AQ9H0A3 160 aa3.74□□□□□ -1.81
SUDS3-202ENST00000541280 NAT8Q9UHE5 227 aa3.74□□□□□ -1.81
SUDS3-202ENST00000541280 DNAH6Q9C0G6 4158 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 LINC00862A6NCI5 91 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 TCAPO15273 167 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 SCGB1D1O95968 90 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 ZNF25P17030 456 aaPredicted RBP3.73□□□□□ -1.81
SUDS3-202ENST00000541280 PMCHP20382 165 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 XGP55808 180 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 KRTAP10-1P60331 282 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 REG3AQ06141 175 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 AMMECR1LQ6DCA0 310 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 LINC00269Q8N2A0 174 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 GATD1Q8NB37 220 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 BAALCQ8WXS3 180 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 ISOC2Q96AB3 205 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 TMEM101Q96IK0 257 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 ST20Q9HBF5 79 aa3.73□□□□□ -1.81
SUDS3-202ENST00000541280 IGLV7-46A0A075B6I9 117 aa3.72□□□□□ -1.81
SUDS3-202ENST00000541280 SDHAF1A6NFY7 115 aa3.72□□□□□ -1.81
SUDS3-202ENST00000541280 F8W036 122 aa3.72□□□□□ -1.81
SUDS3-202ENST00000541280 PPP1R2P9O14990 202 aa3.72□□□□□ -1.81
SUDS3-202ENST00000541280 CCL25O15444 150 aa3.72□□□□□ -1.81
SUDS3-202ENST00000541280 ATP6V1G1O75348 118 aa3.72□□□□□ -1.81
SUDS3-202ENST00000541280 APCSP02743 223 aa3.72□□□□□ -1.81
SUDS3-202ENST00000541280 RAB4AP20338 218 aa3.72□□□□□ -1.81
SUDS3-202ENST00000541280 RPL23P62829 140 aaKnown RBP3.72□□□□□ -1.81
SUDS3-202ENST00000541280 C20orf203Q8NBC4 194 aa3.72□□□□□ -1.81
SUDS3-202ENST00000541280 BTF3L4Q96K17 158 aa3.72□□□□□ -1.81
SUDS3-202ENST00000541280 V9GYV3 84 aa3.72□□□□□ -1.81
SUDS3-202ENST00000541280 NACAE9PAV3 2078 aa3.71□□□□□ -1.82
SUDS3-202ENST00000541280 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.71□□□□□ -1.82
SUDS3-202ENST00000541280 TRBV27A0A0K0K1C4 114 aa3.71□□□□□ -1.82
SUDS3-202ENST00000541280 SMIM27A0A1W2PRY6 76 aa3.71□□□□□ -1.82
SUDS3-202ENST00000541280 PPBPP02775 128 aa3.71□□□□□ -1.82
SUDS3-202ENST00000541280 PNRC1Q12796 327 aaPredicted RBP3.71□□□□□ -1.82
SUDS3-202ENST00000541280 ADIRFQ15847 76 aa3.71□□□□□ -1.82
SUDS3-202ENST00000541280 Q6ZSA8 131 aa3.71□□□□□ -1.82
SUDS3-202ENST00000541280 NUP35Q8NFH5 326 aa3.71□□□□□ -1.82
SUDS3-202ENST00000541280 KIR2DL4Q99706 377 aa3.71□□□□□ -1.82
SUDS3-202ENST00000541280 C20orf78Q9BR46 151 aa3.71□□□□□ -1.82
SUDS3-202ENST00000541280 RPS10P5Q9NQ39 176 aa3.71□□□□□ -1.82
SUDS3-202ENST00000541280 PKIGQ9Y2B9 76 aa3.71□□□□□ -1.82
SUDS3-202ENST00000541280 HECTD4Q9Y4D8 3996 aa3.7□□□□□ -1.82
SUDS3-202ENST00000541280 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.7□□□□□ -1.82
SUDS3-202ENST00000541280 TRBV24-1A0A075B6N3 115 aa3.7□□□□□ -1.82
SUDS3-202ENST00000541280 TRAV26-2A0A0B4J265 109 aa3.7□□□□□ -1.82
SUDS3-202ENST00000541280 PHOX2AO14813 284 aa3.7□□□□□ -1.82
SUDS3-202ENST00000541280 LECT2O14960 151 aa3.7□□□□□ -1.82
SUDS3-202ENST00000541280 ESDP10768 282 aa3.7□□□□□ -1.82
SUDS3-202ENST00000541280 FCER1GP30273 86 aa3.7□□□□□ -1.82
SUDS3-202ENST00000541280 POLR2KP53803 58 aaKnown RBP3.7□□□□□ -1.82
SUDS3-202ENST00000541280 RPL32P62910 135 aaKnown RBP3.7□□□□□ -1.82
SUDS3-202ENST00000541280 FAM104BQ5XKR9 115 aa3.7□□□□□ -1.82
SUDS3-202ENST00000541280 ATP5L2Q7Z4Y8 100 aa3.7□□□□□ -1.82
SUDS3-202ENST00000541280 C9orf163Q8N9P6 203 aa3.7□□□□□ -1.82
SUDS3-202ENST00000541280 OR5A1Q8NGJ0 315 aa3.7□□□□□ -1.82
SUDS3-202ENST00000541280 RPL39LQ96EH5 51 aaKnown RBP3.7□□□□□ -1.82
SUDS3-202ENST00000541280 CSDC2Q9Y534 153 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms