RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 GTSF1LQ9H1H1 148 aa5.93□□□□□ -1.46
CHD4-208ENST00000540960 VCX2Q9H322 139 aa5.93□□□□□ -1.46
CHD4-208ENST00000540960 KLK5Q9Y337 293 aaPredicted RBP5.93□□□□□ -1.46
CHD4-208ENST00000540960 LRP1BQ9NZR2 4599 aa5.93□□□□□ -1.46
CHD4-208ENST00000540960 IGIPA6NJ69 53 aa5.92□□□□□ -1.46
CHD4-208ENST00000540960 LINC00587B1AMM8 73 aa5.92□□□□□ -1.46
CHD4-208ENST00000540960 TSHBP01222 138 aa5.92□□□□□ -1.46
CHD4-208ENST00000540960 COX8AP10176 69 aa5.92□□□□□ -1.46
CHD4-208ENST00000540960 DGAT2L7PQ6IED9 249 aa5.92□□□□□ -1.46
CHD4-208ENST00000540960 ATOH7Q8N100 152 aa5.92□□□□□ -1.46
CHD4-208ENST00000540960 LINC00612Q8N6U2 182 aa5.92□□□□□ -1.46
CHD4-208ENST00000540960 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
CHD4-208ENST00000540960 RNF213Q63HN8 5207 aa5.91□□□□□ -1.46
CHD4-208ENST00000540960 IGHV3-73A0A0B4J1V6 119 aa5.91□□□□□ -1.46
CHD4-208ENST00000540960 GAGE12BA1L429 117 aa5.91□□□□□ -1.46
CHD4-208ENST00000540960 GAGE7O76087 117 aa5.91□□□□□ -1.46
CHD4-208ENST00000540960 GAGE12FP0CL80 117 aa5.91□□□□□ -1.46
CHD4-208ENST00000540960 GAGE12GP0CL81 117 aa5.91□□□□□ -1.46
CHD4-208ENST00000540960 GAGE12IP0CL82 117 aa5.91□□□□□ -1.46
CHD4-208ENST00000540960 MRPS36P82909 103 aaKnown RBP5.91□□□□□ -1.46
CHD4-208ENST00000540960 Q6ZTI0 123 aa5.91□□□□□ -1.46
CHD4-208ENST00000540960 BAALCQ8WXS3 180 aa5.91□□□□□ -1.46
CHD4-208ENST00000540960 CST9LQ9H4G1 147 aa5.91□□□□□ -1.46
CHD4-208ENST00000540960 PGPEP1Q9NXJ5 209 aa5.91□□□□□ -1.46
CHD4-208ENST00000540960 CSDC2Q9Y534 153 aaKnown RBP5.91□□□□□ -1.46
CHD4-208ENST00000540960 C16orf90A8MZG2 172 aa5.9□□□□□ -1.46
CHD4-208ENST00000540960 SPART-AS1P0CW21 52 aa5.9□□□□□ -1.46
CHD4-208ENST00000540960 ZNF25P17030 456 aaPredicted RBP5.9□□□□□ -1.46
CHD4-208ENST00000540960 OR11H2Q8NH07 326 aa5.9□□□□□ -1.46
CHD4-208ENST00000540960 ZNRF2Q8NHG8 242 aa5.9□□□□□ -1.46
CHD4-208ENST00000540960 RNF183Q96D59 192 aa5.9□□□□□ -1.46
CHD4-208ENST00000540960 C14orf144Q96I85 54 aa5.9□□□□□ -1.46
CHD4-208ENST00000540960 TMEM101Q96IK0 257 aa5.9□□□□□ -1.46
CHD4-208ENST00000540960 WFDC10AQ9H1F0 79 aa5.9□□□□□ -1.46
CHD4-208ENST00000540960 MRPL35Q9NZE8 188 aaKnown RBP5.9□□□□□ -1.46
CHD4-208ENST00000540960 A0A0J9YWU9 116 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 hDV102S1A0JD36 115 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 PLAC8L1A1L4L8 177 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 EPM2AB3EWF7 344 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 UBE2L6O14933 153 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 UBE2D3P61077 147 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 UBE2D2P62837 147 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 COL5A1-AS1Q5SY13 56 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 NFE4Q86UQ8 179 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 SLC25A29Q8N8R3 303 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 ZNF479Q96JC4 524 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 DKK2Q9UBU2 259 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 PRO0255Q9UI72 69 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 HHLA3Q9XRX5 114 aa5.89□□□□□ -1.47
CHD4-208ENST00000540960 TRBV25-1A0A075B6N4 114 aa5.88□□□□□ -1.47
CHD4-208ENST00000540960 C11orf86A6NJI1 115 aa5.88□□□□□ -1.47
CHD4-208ENST00000540960 H3BRM9 83 aa5.88□□□□□ -1.47
CHD4-208ENST00000540960 DAD1P61803 113 aa5.88□□□□□ -1.47
CHD4-208ENST00000540960 ZC2HC1BQ5TFG8 222 aa5.88□□□□□ -1.47
CHD4-208ENST00000540960 AMMECR1LQ6DCA0 310 aa5.88□□□□□ -1.47
CHD4-208ENST00000540960 NEGR1Q7Z3B1 354 aa5.88□□□□□ -1.47
CHD4-208ENST00000540960 PHLDA1Q8WV24 401 aaPredicted RBP5.88□□□□□ -1.47
CHD4-208ENST00000540960 TMEM243Q9BU79 118 aa5.88□□□□□ -1.47
CHD4-208ENST00000540960 HIGD1BQ9P298 99 aa5.88□□□□□ -1.47
CHD4-208ENST00000540960 X6R8D5 127 aa5.88□□□□□ -1.47
CHD4-208ENST00000540960 TRAV26-1A0A087WT03 109 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 E9PLD3 99 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 M0R2N4 97 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 ATP5G1P05496 136 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 P0DMU3 169 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 FAM231AP0DMU4 169 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 FAM231CP0DMU5 169 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 DEFB130BP0DP73 79 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 DEFB130AP0DP74 79 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 GCSHP23434 173 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 NMUP48645 174 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 EMP1P54849 157 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 CTAG1AP78358 180 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 FHL2Q14192 279 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 TAL2Q16559 108 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 Q6ZSN1 163 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 OR5A1Q8NGJ0 315 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 PLEKHB2Q96CS7 222 aa5.87□□□□□ -1.47
CHD4-208ENST00000540960 IGLV4-3A0A075B6K6 122 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 GAGE12JA6NER3 117 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 A6NJY4 79 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 J3QL48 77 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 CCL25O15444 150 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 PRM2P04554 102 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 HSD52Q0P140 79 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 GAGE1Q13065 139 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 GAGE4Q13068 117 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 GAGE5Q13069 117 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 DEFB135Q30KP9 77 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 MAJINQ3KP22 176 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 GAGE13Q4V321 117 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 STPG4Q8N801 248 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 AMELXQ99217 191 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 CHCHD7Q9BUK0 85 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 GEMIN7Q9H840 131 aaKnown RBP5.86□□□□□ -1.47
CHD4-208ENST00000540960 AGRNO00468 2067 aa5.86□□□□□ -1.47
CHD4-208ENST00000540960 IGHV4-28A0A0C4DH34 117 aa5.85□□□□□ -1.47
CHD4-208ENST00000540960 TINCRA0A1B0GVN0 87 aa5.85□□□□□ -1.47
CHD4-208ENST00000540960 A6NDN8 102 aa5.85□□□□□ -1.47
CHD4-208ENST00000540960 H3BNG1 76 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms